RNA–Protein interactions for RNA: ENST00000556891.5

DPF3-211, Transcript of double PHD fingers 3, human

TSL 4

Gene DPF3, Length 569 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DPF3-211	ENST00000556891	TMEM92	Q6UXU6	159 aa		13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	TNPO1	Q92973	898 aa	Known RBP	13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	TTC14	Q96N46	770 aa		13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	VPS33B	Q9H267	617 aa		13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	SH2B1	Q9NRF2	756 aa	Predicted RBP	13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	GNL3L	Q9NVN8	582 aa	Known RBP	13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	RBM8A	Q9Y5S9	174 aa	Known RBP	13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	CYP46A1	Q9Y6A2	500 aa		13.64	□□□□□ -0.23
DPF3-211	ENST00000556891	MAST2	Q6P0Q8	1798 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	COL1A1	P02452	1464 aa	Predicted RBP	13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	AKAP11	Q9UKA4	1901 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	WTIP	A6NIX2	430 aa	Predicted RBP	13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	CYP2E1	P05181	493 aa	Predicted RBP	13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	UQCRFS1P1	P0C7P4	283 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	ARID4A	P29374	1257 aa	Predicted RBP	13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	HIBADH	P31937	336 aa	Known RBP	13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	PHKA1	P46020	1223 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	GYG1	P46976	350 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	RASSF7	Q02833	373 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	PTH1R	Q03431	593 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	AOC3	Q16853	763 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	CREB3L3	Q68CJ9	461 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	FAM227B	Q96M60	508 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	LIMCH1	Q9UPQ0	1083 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	SBF1	O95248	1867 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	CCDC88A	Q3V6T2	1871 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	COL4A5	P29400	1685 aa		13.63	□□□□□ -0.23
DPF3-211	ENST00000556891	ZNF646	O15015	1829 aa	Predicted RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891		A0A0D9SFI3	127 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	SEMA3E	O15041	775 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	DEK	P35659	375 aa	Known RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	IARS	P41252	1262 aa	Known RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	BCAM	P50895	628 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	TTF1	Q15361	905 aa	Predicted RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	GPR162	Q16538	588 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	ZSCAN25	Q6NSZ9	544 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	FBXO33	Q7Z6M2	555 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	TXNRD3	Q86VQ6	643 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	FAM84B	Q96KN1	310 aa	Predicted RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	DNAJC2	Q99543	621 aa	Known RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	DSCC1	Q9BVC3	393 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	COA1	Q9GZY4	146 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	CHD4	Q14839	1912 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	DOCK2	Q92608	1830 aa		13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	PDS5A	Q29RF7	1337 aa	Known RBP	13.62	□□□□□ -0.23
DPF3-211	ENST00000556891	SLC27A2	O14975	620 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	RIMBP2	O15034	1052 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	RNF113A	O15541	343 aa	Known RBP	13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	GRIN3B	O60391	1043 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	HMGB1	P09429	215 aa	Known RBP	13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	RASGRF1	Q13972	1273 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	ZMYM1	Q5SVZ6	1142 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	ARHGAP27	Q6ZUM4	889 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	RUFY3	Q7L099	469 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	NIM1K	Q8IY84	436 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	LARGE2	Q8N3Y3	721 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	SCN9A	Q15858	1988 aa		13.61	□□□□□ -0.23
DPF3-211	ENST00000556891	MYH7	P12883	1935 aa		13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	ECE2	O60344	883 aa		13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	CHMP4C	Q96CF2	233 aa		13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	JAKMIP1	Q96N16	626 aa	Known RBP	13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	UPF3B	Q9BZI7	483 aa	Known RBP	13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	CD209	Q9NNX6	404 aa		13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	PDRG1	Q9NUG6	133 aa		13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	DENND2A	Q9ULE3	1009 aa		13.6	□□□□□ -0.23
DPF3-211	ENST00000556891	GOLIM4	O00461	696 aa		13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	IL1R1	P14778	569 aa		13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	LMNB1	P20700	586 aa		13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	CAST	P20810	708 aa	Known RBP	13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	MCAM	P43121	646 aa		13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	JDP2	Q8WYK2	163 aa		13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	DBNDD1	Q9H9R9	158 aa		13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	ISY1	Q9ULR0	285 aa	Known RBP	13.59	□□□□□ -0.23
DPF3-211	ENST00000556891	AK2	P54819	239 aa		13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	SCARF1	Q14162	830 aa		13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	DOK7	Q18PE1	504 aa		13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	BLOC1S2	Q6QNY1	142 aa		13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	PODN	Q7Z5L7	613 aa		13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	SPATA5	Q8NB90	893 aa		13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	TDRD7	Q8NHU6	1098 aa	Known RBP	13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	CTNNA3	Q9UI47	895 aa		13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.58	□□□□□ -0.24
DPF3-211	ENST00000556891	GTPBP6	O43824	516 aa	Predicted RBP	13.57	□□□□□ -0.24
DPF3-211	ENST00000556891	TRAK2	O60296	914 aa		13.57	□□□□□ -0.24
DPF3-211	ENST00000556891	BAG4	O95429	457 aa	Known RBP	13.57	□□□□□ -0.24
DPF3-211	ENST00000556891	CHAF1A	Q13111	956 aa	Predicted RBP	13.57	□□□□□ -0.24
DPF3-211	ENST00000556891	PI16	Q6UXB8	463 aa		13.57	□□□□□ -0.24
DPF3-211	ENST00000556891	ZNF589	Q86UQ0	364 aa	Predicted RBP	13.57	□□□□□ -0.24
DPF3-211	ENST00000556891	EDC3	Q96F86	508 aa	Known RBP	13.57	□□□□□ -0.24
DPF3-211	ENST00000556891	POTEM	A6NI47	508 aa		13.56	□□□□□ -0.24
DPF3-211	ENST00000556891	BRD1	O95696	1058 aa		13.56	□□□□□ -0.24
DPF3-211	ENST00000556891	RPS6KB1	P23443	525 aa		13.56	□□□□□ -0.24
DPF3-211	ENST00000556891	POTEG	Q6S5H5	508 aa		13.56	□□□□□ -0.24
DPF3-211	ENST00000556891	ZGPAT	Q8N5A5	531 aa	Known RBP	13.56	□□□□□ -0.24
DPF3-211	ENST00000556891	WDR66	Q8TBY9	1149 aa		13.56	□□□□□ -0.24

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