RNA–Protein interactions for RNA: ENST00000556821.5

PABPN1-207, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 1,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-207ENST00000556821 YTHDC1Q96MU7 727 aaKnown RBP27.9■■■□□ 2.06
PABPN1-207ENST00000556821 TM4SF4P48230 202 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 CACNB3P54284 484 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 TNFAIP1Q13829 316 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 PRKG1Q13976 671 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 PI16Q6UXB8 463 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 CDAN1Q8IWY9 1227 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 SIRT2Q8IXJ6 389 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.89■■■□□ 2.06
PABPN1-207ENST00000556821 TEPSINQ96N21 525 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 HMG20BQ9P0W2 317 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 EXOC6BQ9Y2D4 811 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 DAGLAQ9Y4D2 1042 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 FOCADQ5VW36 1801 aa27.89■■■□□ 2.06
PABPN1-207ENST00000556821 TCP10L2B9ZVM9 353 aa27.88■■■□□ 2.05
PABPN1-207ENST00000556821 GPR25O00155 361 aa27.88■■■□□ 2.05
PABPN1-207ENST00000556821 DBNDD2Q9BQY9 259 aa27.88■■■□□ 2.05
PABPN1-207ENST00000556821 GORABQ5T7V8 394 aa27.87■■■□□ 2.05
PABPN1-207ENST00000556821 ZGPATQ8N5A5 531 aaKnown RBP27.87■■■□□ 2.05
PABPN1-207ENST00000556821 MCAMP43121 646 aa27.86■■■□□ 2.05
PABPN1-207ENST00000556821 MAP3K11Q16584 847 aa27.86■■■□□ 2.05
PABPN1-207ENST00000556821 LDLRAD1Q5T700 205 aa27.86■■■□□ 2.05
PABPN1-207ENST00000556821 ARMC9Q7Z3E5 817 aa27.86■■■□□ 2.05
PABPN1-207ENST00000556821 RPAP2Q8IXW5 612 aaPredicted RBP27.86■■■□□ 2.05
PABPN1-207ENST00000556821 CFHR5Q9BXR6 569 aa27.86■■■□□ 2.05
PABPN1-207ENST00000556821 TMEM39BQ9GZU3 492 aa27.86■■■□□ 2.05
PABPN1-207ENST00000556821 ANGEL1Q9UNK9 670 aaKnown RBP27.86■■■□□ 2.05
PABPN1-207ENST00000556821 SPATA5Q8NB90 893 aa27.85■■■□□ 2.05
PABPN1-207ENST00000556821 EAF2Q96CJ1 260 aaPredicted RBP27.85■■■□□ 2.05
PABPN1-207ENST00000556821 TLR7Q9NYK1 1049 aaKnown RBP27.85■■■□□ 2.05
PABPN1-207ENST00000556821 ABCF2Q9UG63 623 aa27.85■■■□□ 2.05
PABPN1-207ENST00000556821 DBNLQ9UJU6 430 aaKnown RBP27.85■■■□□ 2.05
PABPN1-207ENST00000556821 SUPT20HL1Q3ZLR7 823 aa27.84■■■□□ 2.05
PABPN1-207ENST00000556821 GAKO14976 1311 aa27.84■■■□□ 2.05
PABPN1-207ENST00000556821 UQCRFS1P1P0C7P4 283 aa27.83■■■□□ 2.05
PABPN1-207ENST00000556821 TNNI2P48788 182 aa27.83■■■□□ 2.05
PABPN1-207ENST00000556821 FKBP1CQ5VVH2 108 aa27.83■■■□□ 2.05
PABPN1-207ENST00000556821 ZNF384Q8TF68 577 aa27.83■■■□□ 2.05
PABPN1-207ENST00000556821 CHMP4BQ9H444 224 aaKnown RBP27.83■■■□□ 2.05
PABPN1-207ENST00000556821 TMOD2Q9NZR1 351 aa27.83■■■□□ 2.05
PABPN1-207ENST00000556821 CDC42EP5Q6NZY7 148 aa27.82■■■□□ 2.04
PABPN1-207ENST00000556821 FAM83AQ86UY5 434 aa27.82■■■□□ 2.04
PABPN1-207ENST00000556821 RPAP1Q9BWH6 1393 aaPredicted RBP27.82■■■□□ 2.04
PABPN1-207ENST00000556821 MYH7P12883 1935 aa27.81■■■□□ 2.04
PABPN1-207ENST00000556821 USP2O75604 605 aaPredicted RBP27.81■■■□□ 2.04
PABPN1-207ENST00000556821 TBC1D9Q6ZT07 1266 aa27.81■■■□□ 2.04
PABPN1-207ENST00000556821 DZIP1Q86YF9 867 aaKnown RBP27.81■■■□□ 2.04
PABPN1-207ENST00000556821 ERC1Q8IUD2 1116 aa27.81■■■□□ 2.04
PABPN1-207ENST00000556821 CCDC8Q9H0W5 538 aaPredicted RBP27.81■■■□□ 2.04
PABPN1-207ENST00000556821 R3HDMLQ9H3Y0 253 aa27.81■■■□□ 2.04
PABPN1-207ENST00000556821 RFX7Q2KHR2 1363 aa27.81■■■□□ 2.04
PABPN1-207ENST00000556821 PPP1R12BO60237 982 aaPredicted RBP27.8■■■□□ 2.04
PABPN1-207ENST00000556821 TTC39AQ5SRH9 613 aa27.8■■■□□ 2.04
PABPN1-207ENST00000556821 SPTY2D1Q68D10 685 aaPredicted RBP27.8■■■□□ 2.04
PABPN1-207ENST00000556821 CLMNQ96JQ2 1002 aa27.8■■■□□ 2.04
PABPN1-207ENST00000556821 HMMRO75330 724 aa27.79■■■□□ 2.04
PABPN1-207ENST00000556821 MECOMQ03112 1051 aa27.79■■■□□ 2.04
PABPN1-207ENST00000556821 CCDC158Q5M9N0 1113 aa27.79■■■□□ 2.04
PABPN1-207ENST00000556821 ERICH6Q7L0X2 663 aa27.79■■■□□ 2.04
PABPN1-207ENST00000556821 RHPN1Q8TCX5 695 aa27.79■■■□□ 2.04
PABPN1-207ENST00000556821 ZNF512BQ96KM6 892 aaPredicted RBP27.79■■■□□ 2.04
PABPN1-207ENST00000556821 NFIAQ12857 509 aa27.78■■■□□ 2.04
PABPN1-207ENST00000556821 HSP90AB4PQ58FF6 505 aa27.78■■■□□ 2.04
PABPN1-207ENST00000556821 SNRKQ9NRH2 765 aa27.78■■■□□ 2.04
PABPN1-207ENST00000556821 MROH7-TTC4A0A0A0MT08 1334 aa27.77■■■□□ 2.04
PABPN1-207ENST00000556821 FKTNO75072 461 aa27.77■■■□□ 2.04
PABPN1-207ENST00000556821 FAM163AQ96GL9 167 aaPredicted RBP27.77■■■□□ 2.04
PABPN1-207ENST00000556821 IL1RAPL2Q9NP60 686 aa27.77■■■□□ 2.04
PABPN1-207ENST00000556821 SIPA1L1O43166 1804 aa27.76■■■□□ 2.04
PABPN1-207ENST00000556821 FXR1P51114 621 aaKnown RBP eCLIP27.76■■■□□ 2.03
PABPN1-207ENST00000556821 RRP1P56182 461 aaKnown RBP27.76■■■□□ 2.03
PABPN1-207ENST00000556821 AACSQ86V21 672 aa27.76■■■□□ 2.03
PABPN1-207ENST00000556821 NSUN4Q96CB9 384 aaKnown RBP27.76■■■□□ 2.03
PABPN1-207ENST00000556821 USP40Q9NVE5 1235 aa27.76■■■□□ 2.03
PABPN1-207ENST00000556821 FAM198AQ9UFP1 575 aa27.76■■■□□ 2.03
PABPN1-207ENST00000556821 ATAD5Q96QE3 1844 aa27.76■■■□□ 2.03
PABPN1-207ENST00000556821 IREB2P48200 963 aaKnown RBP27.75■■■□□ 2.03
PABPN1-207ENST00000556821 MYH1P12882 1939 aa27.75■■■□□ 2.03
PABPN1-207ENST00000556821 POTEFA5A3E0 1075 aa27.74■■■□□ 2.03
PABPN1-207ENST00000556821 UNCXA6NJT0 531 aa27.74■■■□□ 2.03
PABPN1-207ENST00000556821 CYP2E1P05181 493 aaPredicted RBP27.74■■■□□ 2.03
PABPN1-207ENST00000556821 MKRN3Q13064 507 aaKnown RBP27.74■■■□□ 2.03
PABPN1-207ENST00000556821 SPRYD7Q5W111 196 aa27.74■■■□□ 2.03
PABPN1-207ENST00000556821 SLF2Q8IX21 1173 aa27.74■■■□□ 2.03
PABPN1-207ENST00000556821 FAM151AQ8WW52 585 aa27.74■■■□□ 2.03
PABPN1-207ENST00000556821 KIF1BPQ96EK5 621 aa27.74■■■□□ 2.03
PABPN1-207ENST00000556821 DOCK1Q14185 1865 aa27.74■■■□□ 2.03
PABPN1-207ENST00000556821 APBB1O00213 710 aa27.73■■■□□ 2.03
PABPN1-207ENST00000556821 BTDP43251 543 aa27.73■■■□□ 2.03
PABPN1-207ENST00000556821 ZAP70P43403 619 aa27.73■■■□□ 2.03
PABPN1-207ENST00000556821 TCP10Q12799 353 aa27.73■■■□□ 2.03
PABPN1-207ENST00000556821 ANKRD13AQ8IZ07 590 aa27.73■■■□□ 2.03
PABPN1-207ENST00000556821 RAI14Q9P0K7 980 aa27.73■■■□□ 2.03
PABPN1-207ENST00000556821 PTPRFP10586 1907 aa27.73■■■□□ 2.03
PABPN1-207ENST00000556821 PHIPQ8WWQ0 1821 aa27.72■■■□□ 2.03
PABPN1-207ENST00000556821 GPR75-ASB3A0A0A6YYF3 556 aa27.72■■■□□ 2.03
PABPN1-207ENST00000556821 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.72■■■□□ 2.03
PABPN1-207ENST00000556821 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.72■■■□□ 2.035e-9■■■■□ 21.3
PABPN1-207ENST00000556821 SLC10A4Q96EP9 437 aa27.72■■■□□ 2.03
PABPN1-207ENST00000556821 WNK4Q96J92 1243 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms