RNA–Protein interactions for RNA: ENST00000556742.1

IFT43-212, Transcript of intraflagellar transport 43, humanhuman

TSL 2 BASIC

Gene IFT43, Length 848 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-212ENST00000556742 WBP1LQ9NX94 342 aa13.16□□□□□ -0.3
IFT43-212ENST00000556742 SLC10A3P09131 477 aa13.15□□□□□ -0.3
IFT43-212ENST00000556742 GRM1Q13255 1194 aa13.15□□□□□ -0.3
IFT43-212ENST00000556742 TTLL12Q14166 644 aaPredicted RBP13.15□□□□□ -0.3
IFT43-212ENST00000556742 LDLRAD1Q5T700 205 aa13.15□□□□□ -0.3
IFT43-212ENST00000556742 NBPF12Q5TAG4 269 aaPredicted RBP13.15□□□□□ -0.3
IFT43-212ENST00000556742 PI16Q6UXB8 463 aa13.15□□□□□ -0.3
IFT43-212ENST00000556742 CCDC8Q9H0W5 538 aaPredicted RBP13.15□□□□□ -0.3
IFT43-212ENST00000556742 TLR7Q9NYK1 1049 aaKnown RBP13.15□□□□□ -0.3
IFT43-212ENST00000556742 MROH7-TTC4A0A0A0MT08 1334 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 TCP10L2B9ZVM9 353 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 UBE2Q2LH0YL09 131 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 AOC2O75106 756 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 MAP4K4O95819 1239 aaPredicted RBP13.14□□□□□ -0.31
IFT43-212ENST00000556742 LDHCP07864 332 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 GSTO1P78417 241 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 MECOMQ03112 1051 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 CDC42EP5Q6NZY7 148 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 MOB2Q70IA6 237 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 AACSQ86V21 672 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 REM2Q8IYK8 340 aaPredicted RBP13.14□□□□□ -0.31
IFT43-212ENST00000556742 NSUN4Q96CB9 384 aaKnown RBP13.14□□□□□ -0.31
IFT43-212ENST00000556742 HOOK2Q96ED9 719 aa13.14□□□□□ -0.31
IFT43-212ENST00000556742 ANGEL1Q9UNK9 670 aaKnown RBP13.14□□□□□ -0.31
IFT43-212ENST00000556742 RFX7Q2KHR2 1363 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 CYP2E1P05181 493 aaPredicted RBP13.13□□□□□ -0.31
IFT43-212ENST00000556742 CACNB3P54284 484 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 AAMPQ13685 434 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
IFT43-212ENST00000556742 RASAL3Q86YV0 1011 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 ZNF384Q8TF68 577 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 FAM151AQ8WW52 585 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 IDI2Q9BXS1 227 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 TMEM39BQ9GZU3 492 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 IL1RAPL2Q9NP60 686 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 MYH1P12882 1939 aa13.13□□□□□ -0.31
IFT43-212ENST00000556742 GPR75-ASB3A0A0A6YYF3 556 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 CA12O43570 354 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 USP2O75604 605 aaPredicted RBP13.12□□□□□ -0.31
IFT43-212ENST00000556742 IREB2P48200 963 aaKnown RBP13.12□□□□□ -0.31
IFT43-212ENST00000556742 TBC1D9Q6ZT07 1266 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.12□□□□□ -0.31
IFT43-212ENST00000556742 BEGAINQ9BUH8 593 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 LRRCC1Q9C099 1032 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 DCTPP1Q9H773 170 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 USP40Q9NVE5 1235 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 RAI14Q9P0K7 980 aa13.12□□□□□ -0.31
IFT43-212ENST00000556742 ATAD5Q96QE3 1844 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 APBB1O00213 710 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 FOXN1O15353 648 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 ENTPD3O75355 529 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 NPM3O75607 178 aaKnown RBP13.11□□□□□ -0.31
IFT43-212ENST00000556742 IFIT2P09913 472 aaKnown RBP13.11□□□□□ -0.31
IFT43-212ENST00000556742 BTDP43251 543 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 ZAP70P43403 619 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 PRKG1Q13976 671 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 ANKRD13AQ8IZ07 590 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 SNRKQ9NRH2 765 aa13.11□□□□□ -0.31
IFT43-212ENST00000556742 COL2A1P02458 1487 aaPredicted RBP13.1□□□□□ -0.31
IFT43-212ENST00000556742 DOCK1Q14185 1865 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
IFT43-212ENST00000556742 KIF23Q02241 960 aaPredicted RBP13.1□□□□□ -0.31
IFT43-212ENST00000556742 NFIAQ12857 509 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 CDAN1Q8IWY9 1227 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 CRBNQ96SW2 442 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 FAM198AQ9UFP1 575 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 FZD1Q9UP38 647 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 PCDHB15Q9Y5E8 787 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 CASP8AP2Q9UKL3 1982 aa13.1□□□□□ -0.31
IFT43-212ENST00000556742 SIPA1L1O43166 1804 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 WDHD1O75717 1129 aaPredicted RBP13.09□□□□□ -0.31
IFT43-212ENST00000556742 ZBTB48P10074 688 aaPredicted RBP13.09□□□□□ -0.31
IFT43-212ENST00000556742 RHBDL3P58872 404 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
IFT43-212ENST00000556742 DCAF15Q66K64 600 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 NAA16Q6N069 864 aaPredicted RBP13.09□□□□□ -0.31
IFT43-212ENST00000556742 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.09□□□□□ -0.31
IFT43-212ENST00000556742 SLC10A4Q96EP9 437 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 ZIC5Q96T25 663 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 NOL10Q9BSC4 688 aaKnown RBP13.09□□□□□ -0.31
IFT43-212ENST00000556742 PRDM10Q9NQV6 1147 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 SAGE1Q9NXZ1 904 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 PHIPQ8WWQ0 1821 aa13.09□□□□□ -0.31
IFT43-212ENST00000556742 ATRNL1Q5VV63 1379 aa13.08□□□□□ -0.31
IFT43-212ENST00000556742 PTPRFP10586 1907 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 BAG3O95817 575 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 PLCG2P16885 1265 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 RGS3P49796 1198 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 PPP4CP60510 307 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 TCP10Q12799 353 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 SPRYD7Q5W111 196 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 CERS3Q8IU89 383 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 CSRNP1Q96S65 589 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 PIH1D3Q9NQM4 214 aaKnown RBP13.08□□□□□ -0.32
IFT43-212ENST00000556742 NAV1Q8NEY1 1877 aa13.08□□□□□ -0.32
IFT43-212ENST00000556742 HSPA8P11142 646 aaKnown RBP13.07□□□□□ -0.32
IFT43-212ENST00000556742 ATP5JP18859 108 aa13.07□□□□□ -0.32
IFT43-212ENST00000556742 TM4SF4P48230 202 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms