RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 AIDAQ96BJ3 306 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 TEPSINQ96N21 525 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 CHMP4BQ9H444 224 aaKnown RBP12.74□□□□□ -0.37
SNX6-208ENST00000556712 TMOD2Q9NZR1 351 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 TSKSQ9UJT2 592 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 NDUFB9Q9Y6M9 179 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 CDK5RAP2Q96SN8 1893 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 LAMB1P07942 1786 aa12.74□□□□□ -0.37
SNX6-208ENST00000556712 RFX7Q2KHR2 1363 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 MROH7-TTC4A0A0A0MT08 1334 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 GAKO14976 1311 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 MAP2K2P36507 400 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 KIF23Q02241 960 aaPredicted RBP12.73□□□□□ -0.37
SNX6-208ENST00000556712 MAP2K1Q02750 393 aaPredicted RBP12.73□□□□□ -0.37
SNX6-208ENST00000556712 MECOMQ03112 1051 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 NFIAQ12857 509 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 CCDC158Q5M9N0 1113 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 ERICH6Q7L0X2 663 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 ARMC9Q7Z3E5 817 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 CLMNQ96JQ2 1002 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 MRIQ9BWK5 157 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 RAI14Q9P0K7 980 aa12.73□□□□□ -0.37
SNX6-208ENST00000556712 BTDP43251 543 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 ZAP70P43403 619 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 SUPT20HL1Q3ZLR7 823 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 HSP90AB4PQ58FF6 505 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 COL13A1Q5TAT6 717 aaPredicted RBP12.72□□□□□ -0.37
SNX6-208ENST00000556712 SPTY2D1Q68D10 685 aaPredicted RBP12.72□□□□□ -0.37
SNX6-208ENST00000556712 CCDC102AQ96A19 550 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 CRBNQ96SW2 442 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 USP40Q9NVE5 1235 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 FOCADQ5VW36 1801 aa12.72□□□□□ -0.37
SNX6-208ENST00000556712 RPAP1Q9BWH6 1393 aaPredicted RBP12.71□□□□□ -0.37
SNX6-208ENST00000556712 USP2O75604 605 aaPredicted RBP12.71□□□□□ -0.37
SNX6-208ENST00000556712 CYP2E1P05181 493 aaPredicted RBP12.71□□□□□ -0.37
SNX6-208ENST00000556712 HSPA8P11142 646 aaKnown RBP12.71□□□□□ -0.37
SNX6-208ENST00000556712 LBX1P52954 281 aa12.71□□□□□ -0.37
SNX6-208ENST00000556712 TCP10Q12799 353 aa12.71□□□□□ -0.37
SNX6-208ENST00000556712 MAP3K11Q16584 847 aa12.71□□□□□ -0.37
SNX6-208ENST00000556712 LDLRAD1Q5T700 205 aa12.71□□□□□ -0.37
SNX6-208ENST00000556712 NSUN4Q96CB9 384 aaKnown RBP12.71□□□□□ -0.37
SNX6-208ENST00000556712 KIF1BPQ96EK5 621 aa12.71□□□□□ -0.37
SNX6-208ENST00000556712 PIH1D3Q9NQM4 214 aaKnown RBP12.71□□□□□ -0.37
SNX6-208ENST00000556712 FAM198AQ9UFP1 575 aa12.71□□□□□ -0.37
SNX6-208ENST00000556712 PPP1R12BO60237 982 aaPredicted RBP12.7□□□□□ -0.38
SNX6-208ENST00000556712 SMARCA5O60264 1052 aaPredicted RBP12.7□□□□□ -0.38
SNX6-208ENST00000556712 CTCFP49711 727 aaPredicted RBP12.7□□□□□ -0.38
SNX6-208ENST00000556712 PICALMQ13492 652 aa12.7□□□□□ -0.38
SNX6-208ENST00000556712 FKBP1CQ5VVH2 108 aa12.7□□□□□ -0.38
SNX6-208ENST00000556712 FAM83AQ86UY5 434 aa12.7□□□□□ -0.38
SNX6-208ENST00000556712 ZFPM1Q8IX07 1006 aa12.7□□□□□ -0.38
SNX6-208ENST00000556712 BEGAINQ9BUH8 593 aa12.7□□□□□ -0.38
SNX6-208ENST00000556712 LRP2BPQ9P2M1 347 aa12.7□□□□□ -0.38
SNX6-208ENST00000556712 RAB11FIP3O75154 756 aa12.69□□□□□ -0.38
SNX6-208ENST00000556712 IREB2P48200 963 aaKnown RBP12.69□□□□□ -0.38
SNX6-208ENST00000556712 RGS3P49796 1198 aa12.69□□□□□ -0.38
SNX6-208ENST00000556712 CLASRPQ8N2M8 674 aaKnown RBP12.69□□□□□ -0.38
SNX6-208ENST00000556712 FAM151AQ8WW52 585 aa12.69□□□□□ -0.38
SNX6-208ENST00000556712 ZNF512BQ96KM6 892 aaPredicted RBP12.69□□□□□ -0.38
SNX6-208ENST00000556712 ANTXR1Q9H6X2 564 aa12.69□□□□□ -0.38
SNX6-208ENST00000556712 ELP3Q9H9T3 547 aa12.69□□□□□ -0.38
SNX6-208ENST00000556712 DDX4Q9NQI0 724 aaKnown RBP12.69□□□□□ -0.38
SNX6-208ENST00000556712 PCDHB15Q9Y5E8 787 aa12.69□□□□□ -0.38
SNX6-208ENST00000556712 SIPA1L1O43166 1804 aa12.69□□□□□ -0.38
SNX6-208ENST00000556712 GPR75-ASB3A0A0A6YYF3 556 aa12.68□□□□□ -0.38
SNX6-208ENST00000556712 WDHD1O75717 1129 aaPredicted RBP12.68□□□□□ -0.38
SNX6-208ENST00000556712 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
SNX6-208ENST00000556712 GJA5P36382 358 aa12.68□□□□□ -0.38
SNX6-208ENST00000556712 SPRYD7Q5W111 196 aa12.68□□□□□ -0.38
SNX6-208ENST00000556712 ADGRA1Q86SQ6 560 aa12.68□□□□□ -0.38
SNX6-208ENST00000556712 SLF2Q8IX21 1173 aa12.68□□□□□ -0.38
SNX6-208ENST00000556712 CNKSR2Q8WXI2 1034 aa12.68□□□□□ -0.38
SNX6-208ENST00000556712 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
SNX6-208ENST00000556712 CSRNP1Q96S65 589 aa12.68□□□□□ -0.38
SNX6-208ENST00000556712 MYH7P12883 1935 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 IDH1O75874 414 aaKnown RBP12.67□□□□□ -0.38
SNX6-208ENST00000556712 SLURP2P0DP57 97 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 RHBDL3P58872 404 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 GSTO1P78417 241 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 VGLL4Q14135 290 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 NAA16Q6N069 864 aaPredicted RBP12.67□□□□□ -0.38
SNX6-208ENST00000556712 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.67□□□□□ -0.38
SNX6-208ENST00000556712 MIGA2Q7L4E1 593 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 SH3BP5LQ7L8J4 393 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 ANKRD13AQ8IZ07 590 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX6-208ENST00000556712 SLC10A4Q96EP9 437 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 WNK4Q96J92 1243 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 WRNIP1Q96S55 665 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 IDI2Q9BXS1 227 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 LRRCC1Q9C099 1032 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 AATFQ9NY61 560 aaKnown RBP eCLIP12.67□□□□□ -0.38
SNX6-208ENST00000556712 ATRNL1Q5VV63 1379 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 CASP8AP2Q9UKL3 1982 aa12.67□□□□□ -0.38
SNX6-208ENST00000556712 DOCK1Q14185 1865 aa12.66□□□□□ -0.38
SNX6-208ENST00000556712 TRPA1O75762 1119 aa12.66□□□□□ -0.38
SNX6-208ENST00000556712 LDHCP07864 332 aa12.66□□□□□ -0.38
SNX6-208ENST00000556712 SH3RF3Q8TEJ3 882 aaPredicted RBP12.66□□□□□ -0.38
SNX6-208ENST00000556712 EDC3Q96F86 508 aaKnown RBP12.66□□□□□ -0.38
SNX6-208ENST00000556712 DNAJC2Q99543 621 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms