RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 H3BRB1 525 aa6.4□□□□□ -1.38
ATXN3-237ENST00000556274 ARAFP10398 606 aa6.4□□□□□ -1.38
ATXN3-237ENST00000556274 NPR3P17342 541 aa6.4□□□□□ -1.38
ATXN3-237ENST00000556274 GRNP28799 593 aaKnown RBP6.4□□□□□ -1.38
ATXN3-237ENST00000556274 CHRNA2Q15822 529 aa6.4□□□□□ -1.38
ATXN3-237ENST00000556274 LCE3BQ5TA77 95 aa6.4□□□□□ -1.38
ATXN3-237ENST00000556274 ZNF468Q5VIY5 522 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-237ENST00000556274 SYT9Q86SS6 491 aa6.4□□□□□ -1.38
ATXN3-237ENST00000556274 ACDQ96AP0 544 aa6.4□□□□□ -1.38
ATXN3-237ENST00000556274 TUT1Q9H6E5 874 aaKnown RBP6.4□□□□□ -1.38
ATXN3-237ENST00000556274 RGS17Q9UGC6 210 aaPredicted RBP6.4□□□□□ -1.38
ATXN3-237ENST00000556274 ARHGEF10O15013 1369 aa6.4□□□□□ -1.39
ATXN3-237ENST00000556274 ATP7BP35670 1465 aa6.4□□□□□ -1.39
ATXN3-237ENST00000556274 COL22A1Q8NFW1 1626 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-237ENST00000556274 ABCA3Q99758 1704 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 LTN1O94822 1766 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 FAM83GA6ND36 823 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 NEURL1BA8MQ27 555 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 PATL2C9JE40 543 aaKnown RBP6.39□□□□□ -1.39
ATXN3-237ENST00000556274 XYLBO75191 536 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 ADH6P28332 368 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 DNM1Q05193 864 aaKnown RBP6.39□□□□□ -1.39
ATXN3-237ENST00000556274 LYPD4Q6UWN0 246 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 KRT25Q7Z3Z0 450 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 EDEM1Q92611 657 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 C11orf16Q9NQ32 467 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 PRDM11Q9NQV5 511 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 GGA1Q9UJY5 639 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 GDF2Q9UK05 429 aaPredicted RBP6.39□□□□□ -1.39
ATXN3-237ENST00000556274 KCNMB2Q9Y691 235 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 IVNS1ABPQ9Y6Y0 642 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 SBNO1A3KN83 1393 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 TNS3Q68CZ2 1445 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 PLCH1Q4KWH8 1693 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 BRWD3Q6RI45 1802 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 KIF20BQ96Q89 1820 aa6.39□□□□□ -1.39
ATXN3-237ENST00000556274 SASH3O75995 380 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 BCRP11274 1271 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 PCSK2P16519 638 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 NFKB1P19838 968 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 GOLGA6L1Q8N7Z2 621 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 GALNT6Q8NCL4 622 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 TTC16Q8NEE8 873 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 DCAF5Q96JK2 942 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 TESK2Q96S53 571 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 IGFLR1Q9H665 355 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 AVENQ9NQS1 362 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-237ENST00000556274 BTG4Q9NY30 223 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 USP35Q9P2H5 1018 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 KLF15Q9UIH9 416 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 FNDC3AQ9Y2H6 1198 aaKnown RBP6.38□□□□□ -1.39
ATXN3-237ENST00000556274 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.38□□□□□ -1.39
ATXN3-237ENST00000556274 TTC21BQ7Z4L5 1316 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 MON2Q7Z3U7 1717 aa6.38□□□□□ -1.39
ATXN3-237ENST00000556274 PHRF1Q9P1Y6 1649 aaKnown RBP6.37□□□□□ -1.39
ATXN3-237ENST00000556274 SOWAHDA6NJG2 315 aa6.37□□□□□ -1.39
ATXN3-237ENST00000556274 K7ELQ4 463 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-237ENST00000556274 CELA2BP08218 269 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-237ENST00000556274 TARSP26639 723 aaKnown RBP6.37□□□□□ -1.39
ATXN3-237ENST00000556274 MAP3K10Q02779 954 aa6.37□□□□□ -1.39
ATXN3-237ENST00000556274 NME9Q86XW9 330 aa6.37□□□□□ -1.39
ATXN3-237ENST00000556274 EFCC1Q9HA90 598 aa6.37□□□□□ -1.39
ATXN3-237ENST00000556274 TRPC5Q9UL62 973 aaPredicted RBP6.37□□□□□ -1.39
ATXN3-237ENST00000556274 RGPD2P0DJD1 1756 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 COL14A1Q05707 1796 aaKnown RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 POLR3AO14802 1390 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 SIN3BO75182 1162 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 EGFRP00533 1210 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 GCP02774 474 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 RPLP1P05386 114 aaKnown RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 MZF1P28698 734 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 RBM6P78332 1123 aaKnown RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 TBC1D8BQ0IIM8 1120 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 TRIP4Q15650 581 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 ECM1Q16610 540 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 C8orf34Q49A92 452 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 UNC5CLQ8IV45 518 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 EDARADDQ8WWZ3 215 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 LTV1Q96GA3 475 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 KRTAP4-12Q9BQ66 201 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 CCDC87Q9NVE4 849 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 BIN2Q9UBW5 565 aaPredicted RBP6.36□□□□□ -1.39
ATXN3-237ENST00000556274 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 NWD2Q9ULI1 1742 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 CRYBG1Q9Y4K1 1723 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 PIK3C2AO00443 1686 aa6.36□□□□□ -1.39
ATXN3-237ENST00000556274 USP6P35125 1406 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 KIAA0232Q92628 1395 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 PPM1GO15355 546 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-237ENST00000556274 OIP5O43482 229 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 FZD6O60353 706 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 PDGFAP04085 211 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 RARAP10276 462 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 FBLN1P23142 703 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 TNNT2P45379 298 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-237ENST00000556274 SLCO4C1Q6ZQN7 724 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 C1orf229Q6ZS94 237 aaPredicted RBP6.35□□□□□ -1.39
ATXN3-237ENST00000556274 FCHSD1Q86WN1 690 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 COG3Q96JB2 828 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 GGNBP2Q9H3C7 697 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 982.3 ms