RNA–Protein interactions for RNA: ENST00000556220.5

ATXN3-236, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-236ENST00000556220 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.94
ATXN3-236ENST00000556220 CDHR2Q9BYE9 1310 aa9.21□□□□□ -0.94
ATXN3-236ENST00000556220 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
ATXN3-236ENST00000556220 ZNF157P51786 506 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-236ENST00000556220 TNIP1Q15025 636 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 DLK2Q6UY11 383 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 CCDC116Q8IYX3 515 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 MEIOBQ8N635 442 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 C2orf69Q8N8R5 385 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 RTFDC1Q9BY42 306 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-236ENST00000556220 PCGF6Q9BYE7 350 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 TMX4Q9H1E5 349 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-236ENST00000556220 GBA2Q9HCG7 927 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-236ENST00000556220 CDV3Q9UKY7 258 aaKnown RBP9.2□□□□□ -0.94
ATXN3-236ENST00000556220 KNSTRNQ9Y448 316 aa9.2□□□□□ -0.94
ATXN3-236ENST00000556220 UBR2Q8IWV8 1755 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 H7C1D1 291 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 BMP2P12643 396 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 GMPRP36959 345 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 C6orf118Q5T5N4 469 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 LINC00528Q8N1L1 170 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 SUPT20HQ8NEM7 779 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 ARHGAP9Q9BRR9 750 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 ATP6V0A2Q9Y487 856 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 CEMIPQ8WUJ3 1361 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 ABCC12Q96J65 1359 aa9.19□□□□□ -0.94
ATXN3-236ENST00000556220 SHTN1A0MZ66 631 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 ERVV-1B6SEH8 477 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 MAN1A2O60476 641 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 RAD17O75943 681 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 NR6A1Q15406 480 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 TSEN34Q9BSV6 310 aaKnown RBP9.18□□□□□ -0.94
ATXN3-236ENST00000556220 HDAC9Q9UKV0 1011 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 GPSM3Q9Y4H4 160 aa9.18□□□□□ -0.94
ATXN3-236ENST00000556220 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
ATXN3-236ENST00000556220 SUSD4Q5VX71 490 aa9.17□□□□□ -0.94
ATXN3-236ENST00000556220 ZBTB33Q86T24 672 aa9.17□□□□□ -0.94
ATXN3-236ENST00000556220 DPF2Q92785 391 aa9.17□□□□□ -0.94
ATXN3-236ENST00000556220 SOBPA7XYQ1 873 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 AP1G2O75843 785 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 BBOX1O75936 387 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 PTK2Q05397 1052 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 DPP8Q6V1X1 898 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-236ENST00000556220 SP8Q8IXZ3 490 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 ZNF296Q8WUU4 475 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-236ENST00000556220 SLC10A4Q96EP9 437 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 PGPEP1Q9NXJ5 209 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 SZT2Q5T011 3432 aa9.16□□□□□ -0.94
ATXN3-236ENST00000556220 RIC1Q4ADV7 1423 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 BCORQ6W2J9 1755 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 ERBB4Q15303 1308 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 FAM181BA6NEQ2 426 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 YDJCA8MPS7 323 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 ADM5C9JUS6 153 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 VSIG8P0DPA2 414 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 GPTP24298 496 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 TRIM26Q12899 539 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 PPP1R26Q5T8A7 1209 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 FBXO46Q6PJ61 603 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 PNMA1Q8ND90 353 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 DCPSQ96C86 337 aaKnown RBP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
ATXN3-236ENST00000556220 KCTD15Q96SI1 283 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-236ENST00000556220 UBN2Q6ZU65 1347 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 NTSR2O95665 410 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 TBC1D8O95759 1140 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 EGFRP00533 1210 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
ATXN3-236ENST00000556220 NOM1Q5C9Z4 860 aaKnown RBP9.14□□□□□ -0.95
ATXN3-236ENST00000556220 SLC10A5Q5PT55 438 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 RASAL3Q86YV0 1011 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 ZNF34Q8IZ26 560 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 GOPCQ9HD26 462 aa9.14□□□□□ -0.95
ATXN3-236ENST00000556220 A0A0C4DFX4 3053 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 KIAA0100Q14667 2235 aaKnown RBP9.13□□□□□ -0.95
ATXN3-236ENST00000556220 IBTKQ9P2D0 1353 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-236ENST00000556220 ABCC4O15439 1325 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 PSMD14O00487 310 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 TTLL7Q6ZT98 887 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 Q6ZVU0 165 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 PPP1R42Q7Z4L9 355 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 ZSCAN1Q8NBB4 408 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 TIMELESSQ9UNS1 1208 aa9.13□□□□□ -0.95
ATXN3-236ENST00000556220 GPR25O00155 361 aa9.12□□□□□ -0.95
ATXN3-236ENST00000556220 HSPA5P11021 654 aaKnown RBP9.12□□□□□ -0.95
ATXN3-236ENST00000556220 RPS12P25398 132 aaKnown RBP9.12□□□□□ -0.95
ATXN3-236ENST00000556220 FKBP1BP68106 108 aa9.12□□□□□ -0.95
ATXN3-236ENST00000556220 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATXN3-236ENST00000556220 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
ATXN3-236ENST00000556220 KIF6Q6ZMV9 814 aa9.12□□□□□ -0.95
ATXN3-236ENST00000556220 MCM10Q7L590 875 aa9.12□□□□□ -0.95
ATXN3-236ENST00000556220 RTF1Q92541 710 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms