RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 DIAPH3Q9NSV4 1193 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 DAGLAQ9Y4D2 1042 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 GAKO14976 1311 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 DOCK2Q92608 1830 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 RFX7Q2KHR2 1363 aa9.21□□□□□ -0.94
TDP1-214ENST00000556063 MAST2Q6P0Q8 1798 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 MAGEB6P1A0A0J9YX57 407 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 SHTN1A0MZ66 631 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 POTECB2RU33 542 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 WNT10BO00744 389 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 SDSP20132 328 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 BTDP43251 543 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 TNNI2P48788 182 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 PPP4CP60510 307 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 CASC1Q6TDU7 716 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 APOBEC3FQ8IUX4 373 aaKnown RBP9.2□□□□□ -0.94
TDP1-214ENST00000556063 SULF1Q8IWU6 871 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 TRPM4Q8TD43 1214 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 RUFY2Q8WXA3 655 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 APPBP2Q92624 585 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 ZBED3Q96IU2 234 aaPredicted RBP9.2□□□□□ -0.94
TDP1-214ENST00000556063 PRMT6Q96LA8 375 aaPredicted RBP9.2□□□□□ -0.94
TDP1-214ENST00000556063 USP40Q9NVE5 1235 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 ZNF532Q9HCE3 1301 aa9.2□□□□□ -0.94
TDP1-214ENST00000556063 MFAP1P55081 439 aaKnown RBP9.19□□□□□ -0.94
TDP1-214ENST00000556063 NBPF9Q3BBW0 867 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 SPDYE2Q495Y8 402 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 FKBP1CQ5VVH2 108 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 APOBEC3HQ6NTF7 200 aaKnown RBP9.19□□□□□ -0.94
TDP1-214ENST00000556063 AIDAQ96BJ3 306 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 DDRGK1Q96HY6 314 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 CRNKL1Q9BZJ0 848 aaKnown RBP9.19□□□□□ -0.94
TDP1-214ENST00000556063 TDRD3Q9H7E2 651 aaKnown RBP9.19□□□□□ -0.94
TDP1-214ENST00000556063 VEZTQ9HBM0 779 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 AATFQ9NY61 560 aaKnown RBP eCLIP9.19□□□□□ -0.94
TDP1-214ENST00000556063 GGA3Q9NZ52 723 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 ZNF70Q9UC06 446 aaPredicted RBP9.19□□□□□ -0.94
TDP1-214ENST00000556063 PITPNM2Q9BZ72 1349 aa9.19□□□□□ -0.94
TDP1-214ENST00000556063 POLR2AP24928 1970 aaKnown RBP9.19□□□□□ -0.94
TDP1-214ENST00000556063 TCRBV5S4A2TA0A5A2 114 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 CLRN2A0PK11 232 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 TOMM70O94826 608 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 EGFRP00533 1210 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 GSPT1P15170 499 aaKnown RBP9.18□□□□□ -0.94
TDP1-214ENST00000556063 GNAT2P19087 354 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 HIRAP54198 1017 aaPredicted RBP9.18□□□□□ -0.94
TDP1-214ENST00000556063 ZMYM1Q5SVZ6 1142 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 ANGEL2Q5VTE6 544 aaKnown RBP9.18□□□□□ -0.94
TDP1-214ENST00000556063 CHADLQ6NUI6 762 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 CDC42EP5Q6NZY7 148 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 CDC37L1Q7L3B6 337 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 TEX11Q8IYF3 940 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 MIGA1Q8NAN2 632 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 SMC1BQ8NDV3 1235 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 ZNF384Q8TF68 577 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 HELLSQ9NRZ9 838 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 PGAP2Q9UHJ9 254 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 PPP2R3BQ9Y5P8 575 aa9.18□□□□□ -0.94
TDP1-214ENST00000556063 ECM29Q5VYK3 1845 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 KIF3CO14782 793 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 ENTPD3O75355 529 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 MBD4O95243 580 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 USP5P45974 858 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 MCMDC2Q4G0Z9 681 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 KRT26Q7Z3Y9 468 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 FAM83AQ86UY5 434 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 SKAP1Q86WV1 359 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 RBM46Q8TBY0 533 aaKnown RBP9.17□□□□□ -0.94
TDP1-214ENST00000556063 HOOK2Q96ED9 719 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 IDI2Q9BXS1 227 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 PCDHAC2Q9Y5I4 1007 aa9.17□□□□□ -0.94
TDP1-214ENST00000556063 RPAP1Q9BWH6 1393 aaPredicted RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 TCP10L2B9ZVM9 353 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 GPAA1O43292 621 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 EIF5BO60841 1220 aaKnown RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 CDC45O75419 566 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 NF2P35240 595 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 RHBDL3P58872 404 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 DYNLL1P63167 89 aaKnown RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 NMIQ13287 307 aaPredicted RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 SUPT20HL1Q3ZLR7 823 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 ADGRA1Q86SQ6 560 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 AMOTL1Q8IY63 956 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 SP7Q8TDD2 431 aaPredicted RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 SH3RF3Q8TEJ3 882 aaPredicted RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 OSBP2Q969R2 916 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 RIOK1Q9BRS2 568 aaKnown RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 NACAP1Q9BZK3 213 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 ARMT1Q9H993 441 aa9.16□□□□□ -0.94
TDP1-214ENST00000556063 GOLGB1Q14789 3259 aaKnown RBP9.16□□□□□ -0.94
TDP1-214ENST00000556063 ASTN2O75129 1339 aaPredicted RBP9.15□□□□□ -0.94
TDP1-214ENST00000556063 RAD50Q92878 1312 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 WDHD1O75717 1129 aaPredicted RBP9.15□□□□□ -0.94
TDP1-214ENST00000556063 APPP05067 770 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 CHMLP26374 656 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 FSTL1Q12841 308 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 PICALMQ13492 652 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 RASA3Q14644 834 aa9.15□□□□□ -0.94
TDP1-214ENST00000556063 MAP1SQ66K74 1059 aaPredicted RBP9.15□□□□□ -0.94
TDP1-214ENST00000556063 CWC27Q6UX04 472 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms