RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 DAGLAQ9Y4D2 1042 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 MYH2Q9UKX2 1941 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ATRNL1Q5VV63 1379 aa18.01■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ADGRA2Q96PE1 1338 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 PTPRFP10586 1907 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 IFIT1P09914 478 aaKnown RBP18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 PRDX5P30044 214 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 PPIL2Q13356 520 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 MIGA2Q7L4E1 593 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 LPIN2Q92539 896 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 FAM198AQ9UFP1 575 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 DOCK2Q92608 1830 aa18■□□□□ 0.47
CHMP4BP1-201ENST00000556017 MAST3O60307 1309 aa17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 CETPP11597 493 aa17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ALDH1L2Q3SY69 923 aa17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 CDC42EP5Q6NZY7 148 aa17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ZFPM1Q8IX07 1006 aa17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 FAM151AQ8WW52 585 aa17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ZCCHC17Q9NP64 241 aaKnown RBP17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 PHIPQ8WWQ0 1821 aa17.99■□□□□ 0.47
CHMP4BP1-201ENST00000556017 LACTBP83111 547 aaPredicted RBP17.98■□□□□ 0.47
CHMP4BP1-201ENST00000556017 C17orf99Q6UX52 265 aa17.98■□□□□ 0.47
CHMP4BP1-201ENST00000556017 WDR66Q8TBY9 1149 aa17.98■□□□□ 0.47
CHMP4BP1-201ENST00000556017 KCNH4Q9UQ05 1017 aa17.98■□□□□ 0.47
CHMP4BP1-201ENST00000556017 RFX7Q2KHR2 1363 aa17.98■□□□□ 0.47
CHMP4BP1-201ENST00000556017 MGAMO43451 1857 aa17.98■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ZBTB22O15209 634 aa17.97■□□□□ 0.47
CHMP4BP1-201ENST00000556017 SLC5A1P13866 664 aa17.97■□□□□ 0.47
CHMP4BP1-201ENST00000556017 PPATQ06203 517 aa17.97■□□□□ 0.47
CHMP4BP1-201ENST00000556017 SNAPC2Q13487 334 aa17.97■□□□□ 0.47
CHMP4BP1-201ENST00000556017 TMOD2Q9NZR1 351 aa17.97■□□□□ 0.47
CHMP4BP1-201ENST00000556017 SZT2Q5T011 3432 aa17.97■□□□□ 0.47
CHMP4BP1-201ENST00000556017 CIAO1O76071 339 aa17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ZEB1P37275 1124 aaPredicted RBP17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 PHKA1P46020 1223 aa17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 HABP4Q5JVS0 413 aaKnown RBP17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 ZNF341Q9BYN7 854 aa17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 SIL1Q9H173 461 aa17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 PA2G4Q9UQ80 394 aaKnown RBP17.96■□□□□ 0.47
CHMP4BP1-201ENST00000556017 SALL1Q9NSC2 1324 aa17.96■□□□□ 0.46
CHMP4BP1-201ENST00000556017 ADORA1P30542 326 aa17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 TCP10Q12799 353 aa17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 ATP2B3Q16720 1220 aa17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SLC9C1Q4G0N8 1177 aa17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 NOL9Q5SY16 702 aaKnown RBP17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 DCAF15Q66K64 600 aa17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SH3TC2Q8TF17 1288 aa17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 FBXO3Q9UK99 471 aa17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 RANBP2P49792 3224 aaKnown RBP17.95■□□□□ 0.46
CHMP4BP1-201ENST00000556017 PHF20L1A8MW92 1017 aa17.94■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SLURP2P0DP57 97 aa17.94■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SH3BP5LQ7L8J4 393 aa17.94■□□□□ 0.46
CHMP4BP1-201ENST00000556017 ANKRD23Q86SG2 305 aa17.94■□□□□ 0.46
CHMP4BP1-201ENST00000556017 HOOK2Q96ED9 719 aa17.94■□□□□ 0.46
CHMP4BP1-201ENST00000556017 TRIM47Q96LD4 638 aa17.94■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SMC4Q9NTJ3 1288 aa17.94■□□□□ 0.46
CHMP4BP1-201ENST00000556017 GPAT2Q6NUI2 795 aa17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 ZNF384Q8TF68 577 aa17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SHISA4Q96DD7 197 aa17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 COPRSQ9NQ92 184 aa17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 CPA4Q9UI42 421 aa17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 NOB1Q9ULX3 412 aaKnown RBP17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 LRRFIP2Q9Y608 721 aaKnown RBP17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 GAKO14976 1311 aa17.93■□□□□ 0.46
CHMP4BP1-201ENST00000556017 DOCK1Q14185 1865 aa17.92■□□□□ 0.46
CHMP4BP1-201ENST00000556017 UBTFL1P0CB47 393 aaPredicted RBP17.92■□□□□ 0.46
CHMP4BP1-201ENST00000556017 MAP3K10Q02779 954 aa17.92■□□□□ 0.46
CHMP4BP1-201ENST00000556017 MEIS3Q99687 375 aa17.92■□□□□ 0.46
CHMP4BP1-201ENST00000556017 CEP126Q9P2H0 1117 aa17.92■□□□□ 0.46
CHMP4BP1-201ENST00000556017 DOCK3Q8IZD9 2030 aa17.92■□□□□ 0.46
CHMP4BP1-201ENST00000556017 TRIOBPQ9H2D6 2365 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 PDHXO00330 501 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 MYCP01106 439 aaPredicted RBP17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 LDHBP07195 334 aaKnown RBP17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 RASGRF1Q13972 1273 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 MTFR1Q15390 333 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 CCDC102BQ68D86 513 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 GCC1Q96CN9 775 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 IDI2Q9BXS1 227 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 DDX4Q9NQI0 724 aaKnown RBP17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 USP40Q9NVE5 1235 aa17.91■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SEMA3EO15041 775 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 WDHD1O75717 1129 aaPredicted RBP17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 ECM2O94769 699 aaPredicted RBP17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 GNRH1P01148 92 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 BCRP11274 1271 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 IL15P40933 162 aaPredicted RBP17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 RGS3P49796 1198 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 ARHGEF6Q15052 776 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 NBPF11Q86T75 865 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 TMEM106CQ9BVX2 250 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 SRRDQ9UH36 339 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 DENND2AQ9ULE3 1009 aa17.9■□□□□ 0.46
CHMP4BP1-201ENST00000556017 OSBPP22059 807 aa17.89■□□□□ 0.45
CHMP4BP1-201ENST00000556017 PSMC4P43686 418 aa17.89■□□□□ 0.45
CHMP4BP1-201ENST00000556017 TIMM10P62072 90 aa17.89■□□□□ 0.45
CHMP4BP1-201ENST00000556017 FAM163AQ96GL9 167 aaPredicted RBP17.89■□□□□ 0.45
CHMP4BP1-201ENST00000556017 DDTLA6NHG4 134 aaPredicted RBP17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms