RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 MAP3K10Q02779 954 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 CRHR2Q13324 411 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 PPIL2Q13356 520 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 SPTY2D1Q68D10 685 aaPredicted RBP9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 CCDC102BQ68D86 513 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 OTOP1Q7RTM1 612 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 BRI3BPQ8WY22 251 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 IDI2Q9BXS1 227 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 EFCC1Q9HA90 598 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 PTPN22Q9Y2R2 807 aa9.66□□□□□ -0.86
PTCSC3-201ENST00000556013 CCL15-CCL14A0A0B4J2E2 113 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 TLR2O60603 784 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 PRMT2P55345 433 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 SNAPC2Q13487 334 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 MVPQ14764 893 aaKnown RBP9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 CCL15Q16663 113 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 CDC42EP5Q6NZY7 148 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 ATF7IPQ6VMQ6 1270 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 CDAN1Q8IWY9 1227 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 WRNIP1Q96S55 665 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 MEIS3Q99687 375 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 SIL1Q9H173 461 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 DAGLAQ9Y4D2 1042 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 SNCAIPQ9Y6H5 919 aa9.65□□□□□ -0.86
PTCSC3-201ENST00000556013 GAKO14976 1311 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 CXCL11O14625 94 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 IRF6O14896 467 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 GNAI2P04899 355 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 LDHCP07864 332 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 PRDX5P30044 214 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 PHKA1P46020 1223 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 CACNB3P54284 484 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 SOX10P56693 466 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 TIMM10P62072 90 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 TAF1CQ15572 869 aaPredicted RBP9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 NOL9Q5SY16 702 aaKnown RBP9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 NBPF11Q86T75 865 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 ARMC5Q96C12 935 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 USP40Q9NVE5 1235 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 KCNH4Q9UQ05 1017 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 LAMB1P07942 1786 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 PDE4DIPQ5VU43 2346 aa9.64□□□□□ -0.87
PTCSC3-201ENST00000556013 A0A1B0GUL7 405 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 TBC1D12O60347 775 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 TRIM27P14373 513 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 G3BP1Q13283 466 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 ANKRD23Q86SG2 305 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 FAM43AQ8N2R8 423 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 ZKSCAN4Q969J2 545 aaPredicted RBP9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 OTUD5Q96G74 571 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 XAGE2Q96GT9 111 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 GPR108Q9NPR9 543 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 FAM198AQ9UFP1 575 aa9.63□□□□□ -0.87
PTCSC3-201ENST00000556013 ARAP2Q8WZ64 1704 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 GPR75-ASB3A0A0A6YYF3 556 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 BTBD19C9JJ37 291 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 SLC34A2O95436 690 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 NFIAQ12857 509 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 KIF22Q14807 665 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 DIXDC1Q155Q3 683 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 PRPF38BQ5VTL8 546 aaKnown RBP9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 ZKSCAN2Q63HK3 967 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 C17orf99Q6UX52 265 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 ERICH6Q7L0X2 663 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 MIGA2Q7L4E1 593 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 CD99L2Q8TCZ2 262 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 CNKSR2Q8WXI2 1034 aa9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.62□□□□□ -0.87
PTCSC3-201ENST00000556013 UQCRFS1P1P0C7P4 283 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 CAPN2P17655 700 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 HOXD10P28358 340 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 ADORA1P30542 326 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 INPP5BP32019 993 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 GSTO1P78417 241 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 ATP8B2P98198 1209 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 TCP10Q12799 353 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 TFCP2Q12800 502 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 RASGRF1Q13972 1273 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 FASTKD5Q7L8L6 764 aaKnown RBP9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 DZIP1Q86YF9 867 aaKnown RBP9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 ZNF512BQ96KM6 892 aaPredicted RBP9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 TMEM106CQ9BVX2 250 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 TBC1D2Q9BYX2 928 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 ABCF2Q9UG63 623 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 SLC45A1Q9Y2W3 748 aa9.61□□□□□ -0.87
PTCSC3-201ENST00000556013 PHF20L1A8MW92 1017 aa9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 CTNND1O60716 968 aaKnown RBP9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 BCAR3O75815 825 aa9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 ARID4AP29374 1257 aaPredicted RBP9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 RGS3P49796 1198 aa9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 LACTBP83111 547 aaPredicted RBP9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 GORABQ5T7V8 394 aa9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 TMED8Q6PL24 325 aaPredicted RBP9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 SPATA5Q8NB90 893 aa9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 SSH3Q8TE77 659 aa9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 NEUROD6Q96NK8 337 aa9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 NOP58Q9Y2X3 529 aaKnown RBP9.6□□□□□ -0.87
PTCSC3-201ENST00000556013 KIAA0100Q14667 2235 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms