RNA–Protein interactions for RNA: ENST00000555955.3

SIX1-205, Transcript of SIX homeobox 1, humanhuman

TSL 2

Gene SIX1, Length 2,844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-205ENST00000555955 GDAP1L1Q96MZ0 367 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 INTS13Q9NVM9 706 aa16.62■□□□□ 0.25
SIX1-205ENST00000555955 MAP2P11137 1827 aaKnown RBP16.62■□□□□ 0.25
SIX1-205ENST00000555955 A0A1W2PQ27 194 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 A0A1W2PQ64 194 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 A0A1W2PQD8 194 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 PPFIA1Q13136 1202 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 ARHGEF28Q8N1W1 1705 aaKnown RBP16.61■□□□□ 0.25
SIX1-205ENST00000555955 A0A0U1RQJ8 604 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 TMCO5BA8MYB1 307 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 GNGT1P63211 74 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 GUCY1B3Q02153 619 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 ACTN3Q08043 901 aaPredicted RBP16.61■□□□□ 0.25
SIX1-205ENST00000555955 HSP90AA4PQ58FG1 418 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 ATRIPQ8WXE1 791 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 CRACR2AQ9BSW2 395 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 KLC4Q9NSK0 619 aa16.61■□□□□ 0.25
SIX1-205ENST00000555955 PFKFB2O60825 505 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 SSR1P43307 286 aaKnown RBP16.6■□□□□ 0.25
SIX1-205ENST00000555955 WLSQ5T9L3 541 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 B4GALNT4Q76KP1 1039 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 COG1Q8WTW3 980 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 CENPHQ9H3R5 247 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
SIX1-205ENST00000555955 A2ML1A8K2U0 1454 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 TNRQ92752 1358 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 MAP3K5Q99683 1374 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 CLNS1AP54105 237 aaKnown RBP16.6■□□□□ 0.25
SIX1-205ENST00000555955 NMIQ13287 307 aaPredicted RBP16.6■□□□□ 0.25
SIX1-205ENST00000555955 CEP57Q86XR8 500 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 ZC3H4Q9UPT8 1303 aaKnown RBP16.6■□□□□ 0.25
SIX1-205ENST00000555955 A0A1B0GUA9 196 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 MEFVO15553 781 aaPredicted RBP16.6■□□□□ 0.25
SIX1-205ENST00000555955 CEP85LQ5SZL2 805 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
SIX1-205ENST00000555955 CCDC148Q8NFR7 591 aa16.6■□□□□ 0.25
SIX1-205ENST00000555955 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.6■□□□□ 0.25
SIX1-205ENST00000555955 EME2A4GXA9 379 aaPredicted RBP16.59■□□□□ 0.25
SIX1-205ENST00000555955 SOWAHDA6NJG2 315 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 NDUFAB1O14561 156 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 OS9Q13438 667 aaPredicted RBP16.59■□□□□ 0.25
SIX1-205ENST00000555955 WHAMMP3Q1A5X7 153 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 SPECC1LQ69YQ0 1117 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 GRIN2DO15399 1336 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 NUTM2FA1L443 756 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 RTN2O75298 545 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 STK38Q15208 465 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 ZKSCAN8Q15776 578 aaPredicted RBP16.59■□□□□ 0.25
SIX1-205ENST00000555955 NUTM2GQ5VZR2 741 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 Q6ZUG5 572 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 SMARCC2Q8TAQ2 1214 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 EVI5LQ96CN4 794 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 PLCD4Q9BRC7 762 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 ADGRG1Q9Y653 693 aa16.59■□□□□ 0.25
SIX1-205ENST00000555955 PPFIA3O75145 1194 aa16.58■□□□□ 0.25
SIX1-205ENST00000555955 POLA2Q14181 598 aa16.58■□□□□ 0.25
SIX1-205ENST00000555955 SLC35F6Q8N357 371 aa16.58■□□□□ 0.25
SIX1-205ENST00000555955 ECHDC1Q9NTX5 307 aa16.58■□□□□ 0.25
SIX1-205ENST00000555955 ILDR1Q86SU0 546 aaPredicted RBP16.58■□□□□ 0.24
SIX1-205ENST00000555955 ZNF483Q8TF39 744 aaPredicted RBP16.58■□□□□ 0.24
SIX1-205ENST00000555955 NECTIN2Q92692 538 aa16.58■□□□□ 0.24
SIX1-205ENST00000555955 ESF1Q9H501 851 aaKnown RBP16.58■□□□□ 0.24
SIX1-205ENST00000555955 TSPYL4Q9UJ04 414 aa16.58■□□□□ 0.24
SIX1-205ENST00000555955 USP42Q9H9J4 1324 aaKnown RBP16.58■□□□□ 0.24
SIX1-205ENST00000555955 NPHP4O75161 1426 aaPredicted RBP16.58■□□□□ 0.24
SIX1-205ENST00000555955 AGPSO00116 658 aa16.57■□□□□ 0.24
SIX1-205ENST00000555955 ARHGAP25P42331 645 aa16.57■□□□□ 0.24
SIX1-205ENST00000555955 ARHGEF25Q86VW2 580 aa16.57■□□□□ 0.24
SIX1-205ENST00000555955 RBM5P52756 815 aaKnown RBP eCLIP16.57■□□□□ 0.24
SIX1-205ENST00000555955 GRIK3Q13003 919 aa16.57■□□□□ 0.24
SIX1-205ENST00000555955 RTEL1Q9NZ71 1219 aa16.57■□□□□ 0.24
SIX1-205ENST00000555955 ARHGEF10O15013 1369 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 ATXN2Q99700 1313 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 AP1ARQ63HQ0 302 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 NCAPH2Q6IBW4 605 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 CLASRPQ8N2M8 674 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 LINC00301Q8NCQ3 95 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 NSUN7Q8NE18 718 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 ARMC2Q8NEN0 867 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 NAPGQ99747 312 aaPredicted RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 DDX20Q9UHI6 824 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 SLIT1O75093 1534 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 KIF20BQ96Q89 1820 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 CDR1P51861 262 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 SMTNP53814 917 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 CCDC40Q4G0X9 1142 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 FBXO31Q5XUX0 539 aaPredicted RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 SULT6B1Q6IMI4 303 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 NBPF10Q6P3W6 841 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 HOMEZQ8IX15 550 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 SEC62Q99442 399 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 CDC5LQ99459 802 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 LLPHQ9BRT6 129 aaKnown RBP16.56■□□□□ 0.24
SIX1-205ENST00000555955 ATP7BP35670 1465 aa16.56■□□□□ 0.24
SIX1-205ENST00000555955 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
SIX1-205ENST00000555955 PTPDC1A2A3K4 754 aa16.55■□□□□ 0.24
SIX1-205ENST00000555955 IDI1Q13907 227 aa16.55■□□□□ 0.24
SIX1-205ENST00000555955 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
SIX1-205ENST00000555955 RAD9BQ6WBX8 426 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms