RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 CAMSAP1Q5T5Y3 1602 aa7.92□□□□□ -1.14
ATXN3-233ENST00000555816 GGT6Q6P531 493 aa7.92□□□□□ -1.14
ATXN3-233ENST00000555816 DIP2CQ9Y2E4 1556 aa7.92□□□□□ -1.14
ATXN3-233ENST00000555816 DDX3YO15523 660 aaKnown RBP7.91□□□□□ -1.14
ATXN3-233ENST00000555816 PAX4O43316 350 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 TGFB1P01137 390 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 BMP3P12645 472 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 HNRNPMP52272 730 aaKnown RBP eCLIP7.91□□□□□ -1.14
ATXN3-233ENST00000555816 SF3B2Q13435 895 aaKnown RBP7.91□□□□□ -1.14
ATXN3-233ENST00000555816 FDX2Q6P4F2 183 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 GIMAP7Q8NHV1 300 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 RUSC1Q9BVN2 902 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 CHRDQ9H2X0 955 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 SUGCTQ9HAC7 445 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 PLA2R1Q13018 1463 aa7.91□□□□□ -1.14
ATXN3-233ENST00000555816 HMX2A2RU54 273 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 MPSTP25325 297 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 IRAK1P51617 712 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 IKBKEQ14164 716 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 CPSF6Q16630 551 aaKnown RBP eCLIP7.9□□□□□ -1.14
ATXN3-233ENST00000555816 BEND4Q6ZU67 534 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 SNX29Q8TEQ0 813 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 UBASH3BQ8TF42 649 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 OSMRQ99650 979 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 CYP4F12Q9HCS2 524 aa7.9□□□□□ -1.14
ATXN3-233ENST00000555816 C3P01024 1663 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 TCOF1Q13428 1488 aaKnown RBP7.89□□□□□ -1.15
ATXN3-233ENST00000555816 PTPRKQ15262 1439 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 PRR19A6NJB7 356 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 TMEM88BA6NKF7 163 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 PHACTR2O75167 634 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 TNFRSF21O75509 655 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 MED26O95402 600 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 FKBP4Q02790 459 aaKnown RBP eCLIP7.89□□□□□ -1.15
ATXN3-233ENST00000555816 AAMPQ13685 434 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 NUTM2GQ5VZR2 741 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 ANKLE2Q86XL3 938 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 DTX1Q86Y01 620 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 SMG8Q8ND04 991 aaKnown RBP7.89□□□□□ -1.15
ATXN3-233ENST00000555816 BHLHE41Q9C0J9 482 aaPredicted RBP7.89□□□□□ -1.15
ATXN3-233ENST00000555816 KCNF1Q9H3M0 494 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 POLIQ9UNA4 740 aa7.89□□□□□ -1.15
ATXN3-233ENST00000555816 SOX1O00570 391 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-233ENST00000555816 SPINK2P20155 84 aa7.88□□□□□ -1.15
ATXN3-233ENST00000555816 TXKP42681 527 aa7.88□□□□□ -1.15
ATXN3-233ENST00000555816 GP2P55259 537 aaKnown RBP7.88□□□□□ -1.15
ATXN3-233ENST00000555816 THEMISQ8N1K5 641 aaPredicted RBP7.88□□□□□ -1.15
ATXN3-233ENST00000555816 SLC7A3Q8WY07 619 aa7.88□□□□□ -1.15
ATXN3-233ENST00000555816 KRTAP4-12Q9BQ66 201 aa7.88□□□□□ -1.15
ATXN3-233ENST00000555816 TMPRSS13Q9BYE2 586 aa7.88□□□□□ -1.15
ATXN3-233ENST00000555816 KIF14Q15058 1648 aa7.88□□□□□ -1.15
ATXN3-233ENST00000555816 ARHGAP35Q9NRY4 1499 aa7.87□□□□□ -1.15
ATXN3-233ENST00000555816 GAS2O43903 313 aaKnown RBP7.87□□□□□ -1.15
ATXN3-233ENST00000555816 PREPP48147 710 aa7.87□□□□□ -1.15
ATXN3-233ENST00000555816 NLRP12P59046 1061 aa7.87□□□□□ -1.15
ATXN3-233ENST00000555816 EXOSC6Q5RKV6 272 aaKnown RBP7.87□□□□□ -1.15
ATXN3-233ENST00000555816 VN1R5Q7Z5H4 357 aa7.87□□□□□ -1.15
ATXN3-233ENST00000555816 ZKSCAN3Q9BRR0 538 aa7.87□□□□□ -1.15
ATXN3-233ENST00000555816 ZFYVE1Q9HBF4 777 aa7.87□□□□□ -1.15
ATXN3-233ENST00000555816 CFDP1Q9UEE9 299 aaPredicted RBP7.87□□□□□ -1.15
ATXN3-233ENST00000555816 MYO5CQ9NQX4 1742 aa7.86□□□□□ -1.15
ATXN3-233ENST00000555816 ABCA6Q8N139 1617 aa7.86□□□□□ -1.15
ATXN3-233ENST00000555816 WNT11O96014 354 aa7.86□□□□□ -1.15
ATXN3-233ENST00000555816 GOLGA2P5Q9HBQ8 144 aa7.86□□□□□ -1.15
ATXN3-233ENST00000555816 AMOTL2Q9Y2J4 779 aa7.86□□□□□ -1.15
ATXN3-233ENST00000555816 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.86□□□□□ -1.15
ATXN3-233ENST00000555816 SHANK2Q9UPX8 1470 aa7.86□□□□□ -1.15
ATXN3-233ENST00000555816 KIAA1107Q9UPP5 1409 aa7.86□□□□□ -1.15
ATXN3-233ENST00000555816 CPS1P31327 1500 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 ABCC1P33527 1531 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 EREGO14944 169 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 ACPPP15309 386 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 HP1BP3Q5SSJ5 553 aaPredicted RBP7.85□□□□□ -1.15
ATXN3-233ENST00000555816 SHKBP1Q8TBC3 707 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 FMNL2Q96PY5 1086 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 C1orf115Q9H7X2 142 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 A2MP01023 1474 aa7.85□□□□□ -1.15
ATXN3-233ENST00000555816 MED1Q15648 1581 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-233ENST00000555816 A2ML1A8K2U0 1454 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 A6NHS1 94 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 TIAF1O95411 115 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 NEFLP07196 543 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 MAP4P27816 1152 aaKnown RBP7.84□□□□□ -1.15
ATXN3-233ENST00000555816 GJD3Q8N144 294 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 C12orf50Q8NA57 414 aaPredicted RBP7.84□□□□□ -1.15
ATXN3-233ENST00000555816 ZFYVE28Q9HCC9 887 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 ATG3Q9NT62 314 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 PIM2Q9P1W9 311 aa7.84□□□□□ -1.15
ATXN3-233ENST00000555816 OAS3Q9Y6K5 1087 aaKnown RBP7.84□□□□□ -1.15
ATXN3-233ENST00000555816 TNRQ92752 1358 aa7.84□□□□□ -1.16
ATXN3-233ENST00000555816 LOC100289279A0A1B0GTE1 492 aa7.83□□□□□ -1.16
ATXN3-233ENST00000555816 TRPA1O75762 1119 aa7.83□□□□□ -1.16
ATXN3-233ENST00000555816 ESRRAP11474 423 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-233ENST00000555816 HHIPQ96QV1 700 aa7.83□□□□□ -1.16
ATXN3-233ENST00000555816 YIPF2Q9BWQ6 316 aa7.83□□□□□ -1.16
ATXN3-233ENST00000555816 RGS17Q9UGC6 210 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-233ENST00000555816 CASKIN1Q8WXD9 1431 aa7.83□□□□□ -1.16
ATXN3-233ENST00000555816 CEP170BQ9Y4F5 1589 aaPredicted RBP7.83□□□□□ -1.16
ATXN3-233ENST00000555816 GPATCH8Q9UKJ3 1502 aaKnown RBP7.83□□□□□ -1.16
ATXN3-233ENST00000555816 WASHC2CQ9Y4E1 1318 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms