RNA–Protein interactions for RNA: ENST00000555688.1

LINC00641-202, long intergenic non-protein coding RNA 641, humanhuman

TSL 1 (best) BASIC

Gene LINC00641, Length 1,763 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-202ENST00000555688 ATP5JP18859 108 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 RFX1P22670 979 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 GPTP24298 496 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
LINC00641-202ENST00000555688 IL15P40933 162 aaPredicted RBP9.42□□□□□ -0.9
LINC00641-202ENST00000555688 RPIAP49247 311 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 TRIM32Q13049 653 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 ERFEQ4G0M1 354 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 C4orf48Q5BLP8 95 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 PTF1AQ7RTS3 328 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 SMARCC1Q92922 1105 aaPredicted RBP9.42□□□□□ -0.9
LINC00641-202ENST00000555688 DBNDD2Q9BQY9 259 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 C1QTNF2Q9BXJ5 285 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 PUS3Q9BZE2 481 aaKnown RBP9.42□□□□□ -0.9
LINC00641-202ENST00000555688 USP21Q9UK80 565 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 MAFBQ9Y5Q3 323 aaPredicted RBP9.42□□□□□ -0.9
LINC00641-202ENST00000555688 UBN2Q6ZU65 1347 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 HSPA4P34932 840 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 ANAPC15P60006 121 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 CWC27Q6UX04 472 aaKnown RBP9.42□□□□□ -0.9
LINC00641-202ENST00000555688 PHTF2Q8N3S3 785 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
LINC00641-202ENST00000555688 THSD7AQ9UPZ6 1657 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 A0A0G2JS52 829 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 FRAT2O75474 233 aaPredicted RBP9.41□□□□□ -0.9
LINC00641-202ENST00000555688 CAMTA2O94983 1202 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 HSPA1LP34931 641 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 WNT7BP56706 349 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 SLFNL1Q499Z3 407 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 TTLL11Q8NHH1 800 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 RAD50Q92878 1312 aa9.41□□□□□ -0.9
LINC00641-202ENST00000555688 COL5A3P25940 1745 aaPredicted RBP9.4□□□□□ -0.9
LINC00641-202ENST00000555688 TIMM10P62072 90 aa9.4□□□□□ -0.9
LINC00641-202ENST00000555688 CCDC57Q2TAC2 916 aa9.4□□□□□ -0.9
LINC00641-202ENST00000555688 TRMT44Q8IYL2 757 aaKnown RBP9.4□□□□□ -0.9
LINC00641-202ENST00000555688 EDC3Q96F86 508 aaKnown RBP9.4□□□□□ -0.9
LINC00641-202ENST00000555688 CHMP5Q9NZZ3 219 aa9.4□□□□□ -0.9
LINC00641-202ENST00000555688 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.4□□□□□ -0.91
LINC00641-202ENST00000555688 IRS4O14654 1257 aaPredicted RBP9.4□□□□□ -0.91
LINC00641-202ENST00000555688 MCCP23508 829 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 PTH1RQ03431 593 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 SUSD4Q5VX71 490 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 RUFY2Q8WXA3 655 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 FAM227BQ96M60 508 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 CCDC85AQ96PX6 553 aaPredicted RBP9.4□□□□□ -0.91
LINC00641-202ENST00000555688 HAUS7Q99871 368 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 DIAPH3Q9NSV4 1193 aa9.4□□□□□ -0.91
LINC00641-202ENST00000555688 TRMT112Q9UI30 125 aaKnown RBP9.4□□□□□ -0.91
LINC00641-202ENST00000555688 MYH3P11055 1940 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 PDE8AO60658 829 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 SKIP12755 728 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 CTSWP56202 376 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 NMIQ13287 307 aaPredicted RBP9.39□□□□□ -0.91
LINC00641-202ENST00000555688 IFIT5Q13325 482 aaKnown RBP9.39□□□□□ -0.91
LINC00641-202ENST00000555688 RNF135Q8IUD6 432 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 FAM174AQ8TBP5 190 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 KCNB2Q92953 911 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 GREM2Q9H772 168 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 RIPOR2Q9Y4F9 1068 aa9.39□□□□□ -0.91
LINC00641-202ENST00000555688 ZNF609O15014 1411 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 A0A0D9SFI3 127 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 A0A1B0GUL7 405 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 HIP1O00291 1037 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 ITGA6P23229 1130 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
LINC00641-202ENST00000555688 NEK4P51957 841 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 KCNQ4P56696 695 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 SKOR1P84550 965 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 SLC10A4Q96EP9 437 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 NEUROD6Q96NK8 337 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 CDV3Q9UKY7 258 aaKnown RBP9.38□□□□□ -0.91
LINC00641-202ENST00000555688 SNX14Q9Y5W7 946 aa9.38□□□□□ -0.91
LINC00641-202ENST00000555688 LZTS3O60299 673 aaPredicted RBP9.37□□□□□ -0.91
LINC00641-202ENST00000555688 NECTIN1Q15223 517 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 FAM182BQ5T319 152 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 KIAA1211Q6ZU35 1233 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 MAP4K1Q92918 833 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 FSD1Q9BTV5 496 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 MED23Q9ULK4 1368 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 BTAF1O14981 1849 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 CHGBP05060 677 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 VGLL2Q8N8G2 317 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC00641-202ENST00000555688 AFF2P51816 1311 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 CCDC171Q6TFL3 1326 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 CNTNAP4Q9C0A0 1308 aa9.37□□□□□ -0.91
LINC00641-202ENST00000555688 RFX7Q2KHR2 1363 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 ATRNO75882 1429 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 RIC1Q4ADV7 1423 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 NHSQ6T4R5 1651 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 ANKRD18BA2A2Z9 1011 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 USP17L5A8MUK1 530 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 NTSR2O95665 410 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 HCLS1P14317 486 aaPredicted RBP9.36□□□□□ -0.91
LINC00641-202ENST00000555688 ADORA1P30542 326 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 RAB3GAP1Q15042 981 aa9.36□□□□□ -0.91
LINC00641-202ENST00000555688 NBPF20Q3BBV1 942 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms