RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 ADGRA2Q96PE1 1338 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 RANBP2P49792 3224 aaKnown RBP10.62□□□□□ -0.71
NEK9-206ENST00000555537 EVI5O60447 810 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 VAMP4O75379 141 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 FRAT2O75474 233 aaPredicted RBP10.62□□□□□ -0.71
NEK9-206ENST00000555537 TFRCP02786 760 aaKnown RBP10.62□□□□□ -0.71
NEK9-206ENST00000555537 ELNP15502 786 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 UBXN2AP68543 259 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 TCP10Q12799 353 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 FAM83AQ86UY5 434 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 VPS37DQ86XT2 251 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 WWC1Q8IX03 1113 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 ZNF341Q9BYN7 854 aa10.62□□□□□ -0.71
NEK9-206ENST00000555537 GRM8O00222 908 aa10.61□□□□□ -0.71
NEK9-206ENST00000555537 BCAMP50895 628 aa10.61□□□□□ -0.71
NEK9-206ENST00000555537 HDLBPQ00341 1268 aaKnown RBP10.61□□□□□ -0.71
NEK9-206ENST00000555537 DCAF15Q66K64 600 aa10.61□□□□□ -0.71
NEK9-206ENST00000555537 GPAT2Q6NUI2 795 aa10.61□□□□□ -0.71
NEK9-206ENST00000555537 ZDHHC15Q96MV8 337 aa10.61□□□□□ -0.71
NEK9-206ENST00000555537 DEFB118Q96PH6 123 aa10.61□□□□□ -0.71
NEK9-206ENST00000555537 PRKRIP1Q9H875 184 aaPredicted RBP10.61□□□□□ -0.71
NEK9-206ENST00000555537 C9orf78Q9NZ63 289 aaPredicted RBP10.61□□□□□ -0.71
NEK9-206ENST00000555537 TMOD2Q9NZR1 351 aa10.61□□□□□ -0.71
NEK9-206ENST00000555537 ADCY3O60266 1144 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 BCRP11274 1271 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 FLT3LGP49771 235 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 FCGRTP55899 365 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 LRRC24Q50LG9 513 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 CCDC184Q52MB2 194 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 Q7L0L9 218 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 KAZALD1Q96I82 304 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 SUCLG2Q96I99 432 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 PAWRQ96IZ0 340 aaKnown RBP10.6□□□□□ -0.71
NEK9-206ENST00000555537 ZNF112Q9UJU3 913 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 KCNH4Q9UQ05 1017 aa10.6□□□□□ -0.71
NEK9-206ENST00000555537 SALL2Q9Y467 1007 aaPredicted RBP10.6□□□□□ -0.71
NEK9-206ENST00000555537 INHAP05111 366 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 EXOSC9Q06265 439 aaKnown RBP10.59□□□□□ -0.71
NEK9-206ENST00000555537 NFIAQ12857 509 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 CAVIN4Q5BKX8 364 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 SLC4A10Q6U841 1118 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 ZFPM1Q8IX07 1006 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 SLAIN1Q8ND83 568 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 DIS3LQ8TF46 1054 aaKnown RBP10.59□□□□□ -0.71
NEK9-206ENST00000555537 TBC1D22AQ8WUA7 517 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 FAM151AQ8WW52 585 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 HOOK2Q96ED9 719 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 MRIQ9BWK5 157 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 TAOK2Q9UL54 1235 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 ZMYND8Q9ULU4 1186 aaPredicted RBP10.59□□□□□ -0.71
NEK9-206ENST00000555537 CEP290O15078 2479 aa10.59□□□□□ -0.71
NEK9-206ENST00000555537 NBPF7P0C2Y1 421 aaPredicted RBP10.58□□□□□ -0.72
NEK9-206ENST00000555537 SLURP2P0DP57 97 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 METTL24Q5JXM2 366 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 FKBP1CQ5VVH2 108 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 CDC42EP5Q6NZY7 148 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 DEFB123Q8N688 67 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 KLHDC4Q8TBB5 520 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 PARK7Q99497 189 aaKnown RBP10.58□□□□□ -0.72
NEK9-206ENST00000555537 ZHX2Q9Y6X8 837 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 MROH5Q6ZUA9 1318 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 FANCIQ9NVI1 1328 aa10.58□□□□□ -0.72
NEK9-206ENST00000555537 A0A1W2PPC1 479 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 SYN1P17600 705 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 MNX1P50219 401 aaPredicted RBP10.57□□□□□ -0.72
NEK9-206ENST00000555537 DIXDC1Q155Q3 683 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 CCDC27Q2M243 656 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 HHIPL2Q6UWX4 724 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 GADL1Q6ZQY3 521 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 C7orf61Q8IZ16 206 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 SPINK5Q9NQ38 1064 aaPredicted RBP10.57□□□□□ -0.72
NEK9-206ENST00000555537 FAM198AQ9UFP1 575 aa10.57□□□□□ -0.72
NEK9-206ENST00000555537 MGAMO43451 1857 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 CXCL11O14625 94 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 TNPO2O14787 897 aaKnown RBP10.56□□□□□ -0.72
NEK9-206ENST00000555537 PDE8BO95263 885 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 VGLL2Q8N8G2 317 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 GDF15Q99988 308 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 CRISPLD2Q9H0B8 497 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 BICC1Q9H694 974 aaKnown RBP10.56□□□□□ -0.72
NEK9-206ENST00000555537 PAK6Q9NQU5 681 aaPredicted RBP10.56□□□□□ -0.72
NEK9-206ENST00000555537 USP40Q9NVE5 1235 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.56□□□□□ -0.72
NEK9-206ENST00000555537 DAGLAQ9Y4D2 1042 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 LAMA3Q16787 3333 aa10.56□□□□□ -0.72
NEK9-206ENST00000555537 PHF20L1A8MW92 1017 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 NOL9Q5SY16 702 aaKnown RBP10.55□□□□□ -0.72
NEK9-206ENST00000555537 NECAB2Q7Z6G3 386 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 CCDC84Q86UT8 332 aaPredicted RBP10.55□□□□□ -0.72
NEK9-206ENST00000555537 ANKRD13CQ8N6S4 541 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 PXYLP1Q8TE99 480 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 SRCIN1Q9C0H9 1055 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 MTMR10Q9NXD2 777 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 AFG3L2Q9Y4W6 797 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 A0A0C4DFX4 3053 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 MAST3O60307 1309 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 IL16Q14005 1332 aa10.55□□□□□ -0.72
NEK9-206ENST00000555537 AK9Q5TCS8 1911 aa10.54□□□□□ -0.72
NEK9-206ENST00000555537 RPAP1Q9BWH6 1393 aaPredicted RBP10.54□□□□□ -0.72
NEK9-206ENST00000555537 A0A0G2JLL6 359 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms