RNA–Protein interactions for RNA: ENST00000555371.1

NFKBIA-204, Transcript of NFKB inhibitor alpha, humanhuman

TSL 3

Gene NFKBIA, Length 690 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIA-204ENST00000555371 APAF1O14727 1248 aa13.65□□□□□ -0.22
NFKBIA-204ENST00000555371 IL27Q8NEV9 243 aa13.65□□□□□ -0.22
NFKBIA-204ENST00000555371 TDRD3Q9H7E2 651 aaKnown RBP13.65□□□□□ -0.22
NFKBIA-204ENST00000555371 LAS1LQ9Y4W2 734 aaKnown RBP13.65□□□□□ -0.22
NFKBIA-204ENST00000555371 SPDYE2Q495Y8 402 aa13.64□□□□□ -0.23
NFKBIA-204ENST00000555371 FAM9BQ8IZU0 186 aa13.64□□□□□ -0.23
NFKBIA-204ENST00000555371 ZBTB38Q8NAP3 1195 aaPredicted RBP13.64□□□□□ -0.23
NFKBIA-204ENST00000555371 NECAB3Q96P71 396 aaPredicted RBP13.64□□□□□ -0.23
NFKBIA-204ENST00000555371 CHPF2Q9P2E5 772 aa13.64□□□□□ -0.23
NFKBIA-204ENST00000555371 ARIH1Q9Y4X5 557 aaPredicted RBP13.64□□□□□ -0.23
NFKBIA-204ENST00000555371 PDE8AO60658 829 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 TRIM32Q13049 653 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 IRF5Q13568 498 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 SHHQ15465 462 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 C9orf50Q5SZB4 431 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 ASB2Q96Q27 587 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 CDC5LQ99459 802 aaKnown RBP13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 LRFN3Q9BTN0 628 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 THEGQ9P2T0 379 aa13.63□□□□□ -0.23
NFKBIA-204ENST00000555371 MYO9BQ13459 2157 aa13.62□□□□□ -0.23
NFKBIA-204ENST00000555371 DNAH12Q6ZR08 3092 aa13.62□□□□□ -0.23
NFKBIA-204ENST00000555371 CD209Q9NNX6 404 aa13.62□□□□□ -0.23
NFKBIA-204ENST00000555371 HMGCRP04035 888 aa13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 HSP90B1P14625 803 aaKnown RBP13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 KCNJ4P48050 445 aa13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 ATXN2LQ8WWM7 1075 aaKnown RBP13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 HMX1Q9NP08 348 aaPredicted RBP13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 OGDHLQ9ULD0 1010 aa13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 TRIM35Q9UPQ4 493 aa13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 FRMPD3Q5JV73 1810 aa13.61□□□□□ -0.23
NFKBIA-204ENST00000555371 TNNI2P48788 182 aa13.6□□□□□ -0.23
NFKBIA-204ENST00000555371 PPATQ06203 517 aa13.6□□□□□ -0.23
NFKBIA-204ENST00000555371 GRIN2CQ14957 1233 aa13.6□□□□□ -0.23
NFKBIA-204ENST00000555371 BSDC1Q9NW68 430 aaPredicted RBP13.6□□□□□ -0.23
NFKBIA-204ENST00000555371 LEMD3Q9Y2U8 911 aa13.6□□□□□ -0.23
NFKBIA-204ENST00000555371 A0A1B0GUL6 1792 aa13.6□□□□□ -0.23
NFKBIA-204ENST00000555371 INPP5BP32019 993 aa13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 CACNB3P54284 484 aa13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 SMAD3P84022 425 aaKnown RBP13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 MOGSQ13724 837 aa13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 KRT24Q2M2I5 525 aa13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 DIEXFQ68CQ4 756 aaKnown RBP13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 COA7Q96BR5 231 aa13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 GREM2Q9H772 168 aa13.59□□□□□ -0.23
NFKBIA-204ENST00000555371 CTSWP56202 376 aa13.58□□□□□ -0.24
NFKBIA-204ENST00000555371 MRPS5P82675 430 aaKnown RBP13.58□□□□□ -0.24
NFKBIA-204ENST00000555371 CALD1Q05682 793 aaKnown RBP13.58□□□□□ -0.24
NFKBIA-204ENST00000555371 PRKAG2Q9UGJ0 569 aa13.58□□□□□ -0.24
NFKBIA-204ENST00000555371 SALL2Q9Y467 1007 aaPredicted RBP13.58□□□□□ -0.24
NFKBIA-204ENST00000555371 SNAP23O00161 211 aa13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 PCCAP05165 728 aaPredicted RBP13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 COL6A1P12109 1028 aa13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 MRE11P49959 708 aa13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 GPAT2Q6NUI2 795 aa13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 MYD88Q99836 296 aa13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 EPHX3Q9H6B9 360 aa13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 KCNH4Q9UQ05 1017 aa13.57□□□□□ -0.24
NFKBIA-204ENST00000555371 PTPRFP10586 1907 aa13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 PLXNB2O15031 1838 aa13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 TRIM28Q13263 835 aaKnown RBP13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 TMEM31Q5JXX7 168 aa13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 POTEEQ6S8J3 1075 aa13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 MIGA2Q7L4E1 593 aa13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 RIC3Q7Z5B4 369 aa13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 DZIP1LQ8IYY4 767 aaKnown RBP13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 SMCR8Q8TEV9 937 aaPredicted RBP13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 P2RX7Q99572 595 aaKnown RBP13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 BABAM1Q9NWV8 329 aa13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 TTF2Q9UNY4 1162 aaKnown RBP13.56□□□□□ -0.24
NFKBIA-204ENST00000555371 FAM86C2PA6NEL3 165 aa13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 CHL1O00533 1208 aa13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 IGHMBP2P38935 993 aaKnown RBP13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 ATN1P54259 1190 aaPredicted RBP13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 PDE3AQ14432 1141 aa13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 CCDC85BQ15834 202 aaPredicted RBP13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 HDGFL1Q5TGJ6 251 aa13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 POTEHQ6S545 545 aa13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 GADL1Q6ZQY3 521 aa13.55□□□□□ -0.24
NFKBIA-204ENST00000555371 PRKAR2AP13861 404 aaKnown RBP13.54□□□□□ -0.24
NFKBIA-204ENST00000555371 ANKRD13CQ8N6S4 541 aa13.54□□□□□ -0.24
NFKBIA-204ENST00000555371 TRIB2Q92519 343 aa13.54□□□□□ -0.24
NFKBIA-204ENST00000555371 ZNF341Q9BYN7 854 aa13.54□□□□□ -0.24
NFKBIA-204ENST00000555371 PRDM5Q9NQX1 630 aaPredicted RBP13.54□□□□□ -0.24
NFKBIA-204ENST00000555371 CRKP46108 304 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 FKBP1AP62942 108 aaKnown RBP13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 GNAI1P63096 354 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 GOLGA2Q08379 1002 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 DCAF15Q66K64 600 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 ZNF804AQ7Z570 1209 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 GAS2L1Q99501 681 aaPredicted RBP13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 SENP6Q9GZR1 1112 aaPredicted RBP13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 ANKRD2Q9GZV1 360 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 MBIPQ9NS73 344 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 IFT57Q9NWB7 429 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 CWC25Q9NXE8 425 aaPredicted RBP13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 SERPINA10Q9UK55 444 aa13.53□□□□□ -0.24
NFKBIA-204ENST00000555371 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
NFKBIA-204ENST00000555371 MFSD14BQ5SR56 506 aa13.52□□□□□ -0.25
NFKBIA-204ENST00000555371 WWC1Q8IX03 1113 aa13.52□□□□□ -0.25
NFKBIA-204ENST00000555371 TTLL11Q8NHH1 800 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms