RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 KCNH4Q9UQ05 1017 aa5.86□□□□□ -1.47
CPSF2-204ENST00000555244 EP400Q96L91 3159 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 ITSN1Q15811 1721 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 RALGAPBQ86X10 1494 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 ROCK2O75116 1388 aaKnown RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 ACEP12821 1306 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 DCDC2BA2VCK2 349 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 TREHO43280 583 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 MAPTP10636 758 aaKnown RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 FGFR3P22607 806 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 FGD1P98174 961 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 CTBSQ01459 385 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 PDE12Q6L8Q7 609 aaKnown RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 PODNQ7Z5L7 613 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 NPAS4Q8IUM7 802 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 GALNT6Q8NCL4 622 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 NGDNQ8NEJ9 315 aaKnown RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 FOXD4L4Q8WXT5 416 aaPredicted RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 ALKBH8Q96BT7 664 aaKnown RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 BCL2L13Q9BXK5 485 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 EFCC1Q9HA90 598 aa5.85□□□□□ -1.47
CPSF2-204ENST00000555244 ATXN7L1Q9ULK2 861 aaPredicted RBP5.85□□□□□ -1.47
CPSF2-204ENST00000555244 RGS12O14924 1447 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 CPDO75976 1380 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 USP19O94966 1318 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 EVC2Q86UK5 1308 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 FAM83GA6ND36 823 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 C2CD2LO14523 706 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 EFSO43281 561 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 OIP5O43482 229 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 XYLBO75191 536 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 EGFRP00533 1210 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 TNP2Q05952 138 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 VPS72Q15906 364 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 EAPPQ56P03 285 aaPredicted RBP5.84□□□□□ -1.47
CPSF2-204ENST00000555244 GPAT2Q6NUI2 795 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 XKR5Q6UX68 686 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 ZNF438Q7Z4V0 828 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 NIF3L1Q9GZT8 377 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 GGNBP2Q9H3C7 697 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 RRAGCQ9HB90 399 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 MARK1Q9P0L2 795 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 USP20Q9Y2K6 914 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 KCNMB2Q9Y691 235 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 NWD2Q9ULI1 1742 aa5.84□□□□□ -1.47
CPSF2-204ENST00000555244 CPSF1Q10570 1443 aaKnown RBP5.83□□□□□ -1.48
CPSF2-204ENST00000555244 PPIP5K1Q6PFW1 1433 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 TONSLQ96HA7 1378 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 ABCA3Q99758 1704 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 CRYBG1Q9Y4K1 1723 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 SHISA8B8ZZ34 492 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 ATP2B2Q01814 1243 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 KANK3Q6NY19 840 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 C1orf229Q6ZS94 237 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-204ENST00000555244 BEND7Q8N7W2 519 aaPredicted RBP5.83□□□□□ -1.48
CPSF2-204ENST00000555244 PNMA5Q96PV4 448 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 TESK2Q96S53 571 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 NDFIP2Q9NV92 336 aa5.83□□□□□ -1.48
CPSF2-204ENST00000555244 USP6P35125 1406 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 QRICH2Q9H0J4 1663 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 GLI3P10071 1580 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 PHF20L1A8MW92 1017 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 GPR182O15218 404 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 AMPD1P23109 780 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 MAPK8P45983 427 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 FMR1Q06787 632 aaKnown RBP eCLIP5.82□□□□□ -1.48
CPSF2-204ENST00000555244 SFSWAPQ12872 951 aaKnown RBP5.82□□□□□ -1.48
CPSF2-204ENST00000555244 CCINQ13939 588 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 DSC3Q14574 896 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 TRIP4Q15650 581 aaPredicted RBP5.82□□□□□ -1.48
CPSF2-204ENST00000555244 NLRP13Q86W25 1043 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 EDARADDQ8WWZ3 215 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 PMEPA1Q969W9 287 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 CARD11Q9BXL7 1154 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 ELP3Q9H9T3 547 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 GGA1Q9UJY5 639 aa5.82□□□□□ -1.48
CPSF2-204ENST00000555244 COL14A1Q05707 1796 aaKnown RBP5.81□□□□□ -1.48
CPSF2-204ENST00000555244 RBM47A0AV96 593 aaKnown RBP5.81□□□□□ -1.48
CPSF2-204ENST00000555244 A6NHS1 94 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 IGHA2P01877 340 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 GCP02774 474 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 CD33P20138 364 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 SNRPNP63162 240 aaKnown RBP5.81□□□□□ -1.48
CPSF2-204ENST00000555244 FAM182BQ5T319 152 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 TTC39BQ5VTQ0 682 aaPredicted RBP5.81□□□□□ -1.48
CPSF2-204ENST00000555244 NPM2Q86SE8 214 aaKnown RBP5.81□□□□□ -1.48
CPSF2-204ENST00000555244 SNX29Q8TEQ0 813 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 GIPC2Q8TF65 315 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 DNAJC25Q9H1X3 360 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 GDF2Q9UK05 429 aaPredicted RBP5.81□□□□□ -1.48
CPSF2-204ENST00000555244 PRR12Q9ULL5 1215 aa5.81□□□□□ -1.48
CPSF2-204ENST00000555244 USP31Q70CQ4 1352 aa5.8□□□□□ -1.48
CPSF2-204ENST00000555244 NINLQ9Y2I6 1382 aa5.8□□□□□ -1.48
CPSF2-204ENST00000555244 SPATA31A5Q5VU36 1347 aa5.8□□□□□ -1.48
CPSF2-204ENST00000555244 TTC21BQ7Z4L5 1316 aa5.8□□□□□ -1.48
CPSF2-204ENST00000555244 SPATA31A7Q8IWB4 1347 aa5.8□□□□□ -1.48
CPSF2-204ENST00000555244 TTC21AQ8NDW8 1320 aa5.8□□□□□ -1.48
CPSF2-204ENST00000555244 SLIT3O75094 1523 aa5.8□□□□□ -1.48
CPSF2-204ENST00000555244 NRAPQ86VF7 1730 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms