RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 NYXQ9GZU5 481 aa14.12□□□□□ -0.15
ARHGEF40-206ENST00000555232 VEZTQ9HBM0 779 aa14.12□□□□□ -0.15
ARHGEF40-206ENST00000555232 AFF2P51816 1311 aa14.12□□□□□ -0.15
ARHGEF40-206ENST00000555232 BAG3O95817 575 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 STOX1Q6ZVD7 989 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 CEP57L1Q8IYX8 460 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 CPVLQ9H3G5 476 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 ZNF174Q15697 407 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 PPP4R3BQ5MIZ7 849 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 ARHGEF1Q92888 912 aaKnown RBP14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 GTF3C6Q969F1 213 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 ISCA1Q9BUE6 129 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 MAPK8IP1Q9UQF2 711 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 FAM170AA1A519 330 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 NR1I2O75469 434 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 LEO1Q8WVC0 666 aaPredicted RBP14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 SSH2Q76I76 1423 aa14.11□□□□□ -0.15
ARHGEF40-206ENST00000555232 PDIA3P30101 505 aaKnown RBP14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 MTERF4Q7Z6M4 381 aaKnown RBP14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 TEX11Q8IYF3 940 aa14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 NAT10Q9H0A0 1025 aaKnown RBP14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 SPTLC2O15270 562 aa14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 MCM7P33993 719 aa14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 MFSD14BQ5SR56 506 aa14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 CACNB3P54284 484 aa14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 TYRO3Q06418 890 aa14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
ARHGEF40-206ENST00000555232 CCDC196A0A1B0GTZ2 297 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 RFX5P48382 616 aaPredicted RBP14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 AOPEPQ8N6M6 819 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 DHX58Q96C10 678 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 DYNLL2Q96FJ2 89 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 CCDC194A0A1B0GVG4 234 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 SYKP43405 635 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 ENOX2Q16206 610 aaKnown RBP14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 CLIC6Q96NY7 704 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 KRT23Q9C075 422 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 SCAF8Q9UPN6 1271 aaKnown RBP14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 DYNC1I1O14576 645 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 COBLO75128 1261 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 LETM1O95202 739 aaPredicted RBP14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 CYP2D6P10635 497 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 KLRK1P26718 216 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 TOB2Q14106 344 aaPredicted RBP14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 CDK5RAP3Q96JB5 506 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 GPCPD1Q9NPB8 672 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 CGNQ9P2M7 1197 aaKnown RBP14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 MROH5Q6ZUA9 1318 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 ITSN1Q15811 1721 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 BTBD18B2RXH4 712 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 NMT2O60551 498 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 TFAP4Q01664 338 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 LINC00116Q8NCU8 138 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 DBNDD1Q9H9R9 158 aa14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 HOOK1Q9UJC3 728 aaKnown RBP14.09□□□□□ -0.15
ARHGEF40-206ENST00000555232 KRT40Q6A162 431 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 UBN2Q6ZU65 1347 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 PAXIP1Q6ZW49 1069 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 DIS3L2Q8IYB7 885 aaKnown RBP14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 ZSWIM5Q9P217 1185 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 PARP3Q9Y6F1 533 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 ARHGAP23Q9P227 1491 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 UBE2Q2LH0YL09 131 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 USP17L8P0C7I0 530 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 DMTNQ08495 405 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 CCDC186Q7Z3E2 898 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 ZNF804AQ7Z570 1209 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 CCDC94Q9BW85 323 aaPredicted RBP14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 CLIP2Q9UDT6 1046 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 AKNAD1Q5T1N1 836 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 GGA1Q9UJY5 639 aa14.08□□□□□ -0.16
ARHGEF40-206ENST00000555232 SERPINB2P05120 415 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 IDEP14735 1019 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 SLC44A5Q8NCS7 719 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 DSCC1Q9BVC3 393 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 SENP2Q9HC62 589 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 NOL7Q9UMY1 257 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 KRT18P05783 430 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 ADD2P35612 726 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 PPARAQ07869 468 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 ZNF771Q7L3S4 317 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 TBC1D10CQ8IV04 446 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 SEC63Q9UGP8 760 aaKnown RBP14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 TCEAL9Q9UHQ7 104 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 UBR1Q8IWV7 1749 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 FAM196BA6NMK8 535 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 CDC25AP30304 524 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 PRKG1Q13976 671 aa14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 ZSCAN16Q9H4T2 348 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 RGPD8O14715 1765 aaPredicted RBP14.07□□□□□ -0.16
ARHGEF40-206ENST00000555232 ZNF804BA4D1E1 1349 aa14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 VWA3AA6NCI4 1184 aa14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 PATL2C9JE40 543 aaKnown RBP14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 SMIM22K7EJ46 135 aa14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 ZBTB22O15209 634 aa14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 C3orf67Q6ZVT6 689 aa14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 MRPS27Q92552 414 aaKnown RBP14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 GPKOWQ92917 476 aaPredicted RBP eCLIP14.06□□□□□ -0.16
ARHGEF40-206ENST00000555232 PPP1R9BQ96SB3 815 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms