RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-231ENST00000554994 A0A1W2PP64 1363 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 CUL9Q8IWT3 2517 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 SPATA31C1P0DKV0 1188 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 SSFA2P28290 1259 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 ADH6P28332 368 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 FXR1P51114 621 aaKnown RBP eCLIP6.33□□□□□ -1.4
ATXN3-231ENST00000554994 FIGNL1Q6PIW4 674 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 FCHSD1Q86WN1 690 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 LINC00116Q8NCU8 138 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 RHBDD1Q8TEB9 315 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 GCC1Q96CN9 775 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 TPSG1Q9NRR2 321 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 PCDHGC4Q9Y5F7 938 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 C4AP0C0L4 1744 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 NSD3Q9BZ95 1437 aa6.33□□□□□ -1.4
ATXN3-231ENST00000554994 FYB1O15117 783 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 ATXN7O15265 892 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-231ENST00000554994 AOC2O75106 756 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 PCBP4P57723 403 aaKnown RBP6.32□□□□□ -1.4
ATXN3-231ENST00000554994 NR1H3Q13133 447 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 TLR1Q15399 786 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 ARTNQ5T4W7 220 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 CYP4F22Q6NT55 531 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 MPRIPQ6WCQ1 1025 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 TBC1D9Q6ZT07 1266 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 SLC17A8Q8NDX2 589 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 CAPNS2Q96L46 248 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 CRISPLD1Q9H336 500 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 KLF15Q9UIH9 416 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 ZNF330Q9Y3S2 320 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-231ENST00000554994 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 HRH3Q9Y5N1 445 aa6.32□□□□□ -1.4
ATXN3-231ENST00000554994 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
ATXN3-231ENST00000554994 CD163L1Q9NR16 1453 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 KHNYNO15037 678 aaKnown RBP6.31□□□□□ -1.4
ATXN3-231ENST00000554994 DYRK3O43781 588 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 DDNO94850 711 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-231ENST00000554994 ZEB1P37275 1124 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-231ENST00000554994 MCCD1P59942 119 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-231ENST00000554994 RRS1Q15050 365 aaKnown RBP6.31□□□□□ -1.4
ATXN3-231ENST00000554994 EAPPQ56P03 285 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-231ENST00000554994 NKAPLQ5M9Q1 402 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 MORC1Q86VD1 984 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 LDHDQ86WU2 507 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 GPR101Q96P66 508 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-231ENST00000554994 PRR12Q9ULL5 1215 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 PARP3Q9Y6F1 533 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 THSD7BQ9C0I4 1608 aa6.31□□□□□ -1.4
ATXN3-231ENST00000554994 ANKRD26Q9UPS8 1709 aa6.3□□□□□ -1.4
ATXN3-231ENST00000554994 MEGF6O75095 1541 aa6.3□□□□□ -1.4
ATXN3-231ENST00000554994 CGNL1Q0VF96 1302 aa6.3□□□□□ -1.4
ATXN3-231ENST00000554994 FAM229AH3BQW9 127 aa6.3□□□□□ -1.4
ATXN3-231ENST00000554994 NFKBIEO00221 500 aa6.3□□□□□ -1.4
ATXN3-231ENST00000554994 MAPTP10636 758 aaKnown RBP6.3□□□□□ -1.4
ATXN3-231ENST00000554994 FMR1Q06787 632 aaKnown RBP eCLIP6.3□□□□□ -1.4
ATXN3-231ENST00000554994 PRRT3Q5FWE3 981 aa6.3□□□□□ -1.4
ATXN3-231ENST00000554994 CC2D1BQ5T0F9 858 aaKnown RBP6.3□□□□□ -1.4
ATXN3-231ENST00000554994 MAP1SQ66K74 1059 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-231ENST00000554994 ZCRB1Q8TBF4 217 aaKnown RBP6.3□□□□□ -1.4
ATXN3-231ENST00000554994 ZNF592Q92610 1267 aa6.3□□□□□ -1.4
ATXN3-231ENST00000554994 CCDC85AQ96PX6 553 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-231ENST00000554994 DNAAF2Q9NVR5 837 aaKnown RBP6.3□□□□□ -1.4
ATXN3-231ENST00000554994 KIF7Q2M1P5 1343 aa6.29□□□□□ -1.4
ATXN3-231ENST00000554994 ITPK1Q13572 414 aa6.29□□□□□ -1.4
ATXN3-231ENST00000554994 CCDC88AQ3V6T2 1871 aa6.29□□□□□ -1.4
ATXN3-231ENST00000554994 ARSJQ5FYB0 599 aaPredicted RBP6.29□□□□□ -1.4
ATXN3-231ENST00000554994 PRSS36Q5K4E3 855 aa6.29□□□□□ -1.4
ATXN3-231ENST00000554994 NLGN1Q8N2Q7 840 aa6.29□□□□□ -1.4
ATXN3-231ENST00000554994 ETNK1Q9HBU6 452 aa6.29□□□□□ -1.4
ATXN3-231ENST00000554994 BTBD11A6QL63 1104 aa6.28□□□□□ -1.4
ATXN3-231ENST00000554994 GYS1P13807 737 aa6.28□□□□□ -1.4
ATXN3-231ENST00000554994 DDR1Q08345 913 aa6.28□□□□□ -1.4
ATXN3-231ENST00000554994 TMEM259Q4ZIN3 620 aa6.28□□□□□ -1.4
ATXN3-231ENST00000554994 IP6K1Q92551 441 aa6.28□□□□□ -1.4
ATXN3-231ENST00000554994 TAF1DQ9H5J8 278 aaPredicted RBP6.28□□□□□ -1.4
ATXN3-231ENST00000554994 HCN2Q9UL51 889 aa6.28□□□□□ -1.4
ATXN3-231ENST00000554994 MAP3K19Q56UN5 1328 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 LOC102724428A0A0B4J2F2 783 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 A0A1W2PNR3 127 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 SPDYE3A6NKU9 549 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 ATP4AP20648 1035 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 ECE1P42892 770 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 SIK1P57059 783 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 TNP2Q05952 138 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
ATXN3-231ENST00000554994 TRAPPC3LQ5T215 181 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 NLRP8Q86W28 1048 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 CNTROBQ8N137 903 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 USHBP1Q8N6Y0 703 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 SMARCC1Q92922 1105 aaPredicted RBP6.27□□□□□ -1.41
ATXN3-231ENST00000554994 GJA3Q9Y6H8 435 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 USP31Q70CQ4 1352 aa6.27□□□□□ -1.41
ATXN3-231ENST00000554994 ADAMTS7Q9UKP4 1686 aa6.26□□□□□ -1.41
ATXN3-231ENST00000554994 WASHC2AQ641Q2 1341 aa6.26□□□□□ -1.41
ATXN3-231ENST00000554994 PITPNM2Q9BZ72 1349 aa6.26□□□□□ -1.41
ATXN3-231ENST00000554994 HOXC9P31274 260 aa6.26□□□□□ -1.41
ATXN3-231ENST00000554994 HSP90AB2PQ58FF8 381 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms