RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, human

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
XRCC3-208	ENST00000554811	GSDMD	P57764	484 aa		13.66	□□□□□ -0.22
XRCC3-208	ENST00000554811	KIF23	Q02241	960 aa	Predicted RBP	13.66	□□□□□ -0.22
XRCC3-208	ENST00000554811	NR5A1	Q13285	461 aa		13.66	□□□□□ -0.22
XRCC3-208	ENST00000554811	TSGA10IP	Q3SY00	556 aa		13.66	□□□□□ -0.22
XRCC3-208	ENST00000554811	MRFAP1L1	Q96HT8	127 aa		13.66	□□□□□ -0.22
XRCC3-208	ENST00000554811	LZTFL1	Q9NQ48	299 aa		13.66	□□□□□ -0.22
XRCC3-208	ENST00000554811	MAPK8IP1	Q9UQF2	711 aa		13.66	□□□□□ -0.22
XRCC3-208	ENST00000554811	MFSD6	Q6ZSS7	791 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	CAVIN2	O95810	425 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	ANTXR2	P58335	489 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	SART3	Q15020	963 aa	Known RBP	13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	LRRN4CL	Q8ND94	238 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	SDR42E1	Q8WUS8	393 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	EEF2KMT	Q96G04	330 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	CCDC34	Q96HJ3	373 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	CABP5	Q9NP86	173 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	RTEL1	Q9NZ71	1219 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	HEG1	Q9ULI3	1381 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	LTN1	O94822	1766 aa		13.65	□□□□□ -0.22
XRCC3-208	ENST00000554811	ZFY	P08048	801 aa	Predicted RBP	13.65	□□□□□ -0.23
XRCC3-208	ENST00000554811	KCNQ4	P56696	695 aa		13.65	□□□□□ -0.23
XRCC3-208	ENST00000554811	DIS3L2	Q8IYB7	885 aa	Known RBP	13.65	□□□□□ -0.23
XRCC3-208	ENST00000554811	NKX2-3	Q8TAU0	364 aa		13.65	□□□□□ -0.23
XRCC3-208	ENST00000554811	CARD6	Q9BX69	1037 aa		13.65	□□□□□ -0.23
XRCC3-208	ENST00000554811	KCNH3	Q9ULD8	1083 aa		13.65	□□□□□ -0.23
XRCC3-208	ENST00000554811	PDE6A	P16499	860 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	LONRF3	Q496Y0	759 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	SEC31B	Q9NQW1	1179 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	PCDHA5	Q9Y5H7	936 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	MROH7-TTC4	A0A0A0MT08	1334 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	PCDH11X	Q9BZA7	1347 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	PCDH11Y	Q9BZA8	1340 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	NEMF	O60524	1076 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	MAP3K12	Q12852	859 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	FBXO38	Q6PIJ6	1188 aa		13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	SMYD4	Q8IYR2	804 aa	Predicted RBP	13.64	□□□□□ -0.23
XRCC3-208	ENST00000554811	NLRP12	P59046	1061 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	CCZ1B	P86790	482 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	CCZ1	P86791	482 aa	Predicted RBP	13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	ARMCX5	Q6P1M9	558 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	APOA5	Q6Q788	366 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	ZBTB1	Q9Y2K1	713 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	ADAMTS2	O95450	1211 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	GUCY1A2	P33402	732 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	BCAM	P50895	628 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	MYL5	Q02045	173 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	WTAP	Q15007	396 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	CADPS2	Q86UW7	1296 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	PPP1R13B	Q96KQ4	1090 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	PLIN2	Q99541	437 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	CYP2D7	A0A087X1C5	515 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	GRIN1	Q05586	938 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	DHX8	Q14562	1220 aa	Known RBP	13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	RTN1	Q16799	776 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	SMIM5	Q71RC9	77 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	BRAP	Q7Z569	592 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	DZIP3	Q86Y13	1208 aa	Known RBP	13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	ENGASE	Q8NFI3	743 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	NEDD4	P46934	1319 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	CACNA1F	O60840	1977 aa		13.63	□□□□□ -0.23
XRCC3-208	ENST00000554811	ZSCAN20	P17040	1043 aa	Predicted RBP	13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	KMT5B	Q4FZB7	885 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	NACAP1	Q9BZK3	213 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	VPS54	Q9P1Q0	977 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	SERTAD1	Q9UHV2	236 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	NFE2L3	Q9Y4A8	694 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	NCAPD2	Q15021	1401 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	CASP7	P55210	303 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	BBX	Q8WY36	941 aa	Predicted RBP	13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	HPS5	Q9UPZ3	1129 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	CYP7A1	P22680	504 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	CCDC150	Q8NCX0	1101 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	SMARCE1	Q969G3	411 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	BTG4	Q9NY30	223 aa		13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	HOOK1	Q9UJC3	728 aa	Known RBP	13.62	□□□□□ -0.23
XRCC3-208	ENST00000554811	SEC31A	O94979	1220 aa	Known RBP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	CCT6A	P40227	531 aa	Known RBP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	MB21D2	Q8IYB1	491 aa	Predicted RBP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	ZSWIM5	Q9P217	1185 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	PUF60	Q9UHX1	559 aa	Known RBP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	NALCN	Q8IZF0	1738 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	SMIM22	K7EJ46	135 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	YEATS4	O95619	227 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	KRT222	Q8N1A0	295 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	ZNF397	Q8NF99	534 aa	Predicted RBP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	TOPAZ1	Q8N9V7	1692 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	GTF2F1	P35269	517 aa	Known RBP eCLIP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	ZNF174	Q15697	407 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	E4F1	Q66K89	784 aa	Predicted RBP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	PIGB	Q92521	554 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	OGFR	Q9NZT2	677 aa		13.61	□□□□□ -0.23
XRCC3-208	ENST00000554811	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.6	□□□□□ -0.23
XRCC3-208	ENST00000554811	NUTM2E	B1AL46	878 aa	Predicted RBP	13.6	□□□□□ -0.23
XRCC3-208	ENST00000554811	SHC4	Q6S5L8	630 aa		13.6	□□□□□ -0.23
XRCC3-208	ENST00000554811	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.6	□□□□□ -0.23
XRCC3-208	ENST00000554811	FAM205C	A6NFA0	338 aa		13.6	□□□□□ -0.23
XRCC3-208	ENST00000554811	CBFA2T2	O43439	604 aa		13.6	□□□□□ -0.23
XRCC3-208	ENST00000554811	SLC5A1	P13866	664 aa		13.6	□□□□□ -0.23
XRCC3-208	ENST00000554811	DMTN	Q08495	405 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms