RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 MAP3K11Q16584 847 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 PRAMEF18Q5VWM3 479 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 HHIPL2Q6UWX4 724 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 SLC39A7Q92504 469 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 XAGE2Q96GT9 111 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 TDRD3Q9H7E2 651 aaKnown RBP9.3□□□□□ -0.92
LINC00640-201ENST00000554409 C1orf115Q9H7X2 142 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 GPR108Q9NPR9 543 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 NOP58Q9Y2X3 529 aaKnown RBP9.3□□□□□ -0.92
LINC00640-201ENST00000554409 MYH2Q9UKX2 1941 aa9.3□□□□□ -0.92
LINC00640-201ENST00000554409 MAST2Q6P0Q8 1798 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 AKAP11Q9UKA4 1901 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 RPAP1Q9BWH6 1393 aaPredicted RBP9.29□□□□□ -0.92
LINC00640-201ENST00000554409 UNCXA6NJT0 531 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 CA12O43570 354 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 ARID4AP29374 1257 aaPredicted RBP9.29□□□□□ -0.92
LINC00640-201ENST00000554409 RASGRF1Q13972 1273 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 RASA3Q14644 834 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 SUPT20HL1Q3ZLR7 823 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 FKBP1CQ5VVH2 108 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 CEP85Q6P2H3 762 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 MOB2Q70IA6 237 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 ARMC9Q7Z3E5 817 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 RASAL3Q86YV0 1011 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 ZGPATQ8N5A5 531 aaKnown RBP9.29□□□□□ -0.92
LINC00640-201ENST00000554409 VEZTQ9HBM0 779 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 PRDM10Q9NQV6 1147 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 DDX19BQ9UMR2 479 aa9.29□□□□□ -0.92
LINC00640-201ENST00000554409 UBE2Q2LH0YL09 131 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 LDHBP07195 334 aaKnown RBP9.28□□□□□ -0.92
LINC00640-201ENST00000554409 C7P10643 843 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 HSPA8P11142 646 aaKnown RBP9.28□□□□□ -0.92
LINC00640-201ENST00000554409 PRDX5P30044 214 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 TNNI2P48788 182 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 PDE3AQ14432 1141 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 LDLRAD1Q5T700 205 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 COL13A1Q5TAT6 717 aaPredicted RBP9.28□□□□□ -0.92
LINC00640-201ENST00000554409 APOBEC3HQ6NTF7 200 aaKnown RBP9.28□□□□□ -0.92
LINC00640-201ENST00000554409 TEPSINQ96N21 525 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 ZIC5Q96T25 663 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 BEGAINQ9BUH8 593 aa9.28□□□□□ -0.92
LINC00640-201ENST00000554409 CHMP4BQ9H444 224 aaKnown RBP9.28□□□□□ -0.92
LINC00640-201ENST00000554409 SURF6O75683 361 aaKnown RBP9.27□□□□□ -0.93
LINC00640-201ENST00000554409 TTLL12Q14166 644 aaPredicted RBP9.27□□□□□ -0.93
LINC00640-201ENST00000554409 TNNI3KQ59H18 835 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 NBPF12Q5TAG4 269 aaPredicted RBP9.27□□□□□ -0.93
LINC00640-201ENST00000554409 SPTY2D1Q68D10 685 aaPredicted RBP9.27□□□□□ -0.93
LINC00640-201ENST00000554409 FAM83AQ86UY5 434 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 RPAP2Q8IXW5 612 aaPredicted RBP9.27□□□□□ -0.93
LINC00640-201ENST00000554409 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.27□□□□□ -0.93
LINC00640-201ENST00000554409 NEUROD6Q96NK8 337 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 ZBTB40Q9NUA8 1239 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 SAGE1Q9NXZ1 904 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 TMOD2Q9NZR1 351 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 COG6Q9Y2V7 657 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 DAGLAQ9Y4D2 1042 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 FPGT-TNNI3KV9GXZ4 949 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 GAKO14976 1311 aa9.27□□□□□ -0.93
LINC00640-201ENST00000554409 DOCK2Q92608 1830 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 TCP10L2B9ZVM9 353 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 PPP1R12BO60237 982 aaPredicted RBP9.26□□□□□ -0.93
LINC00640-201ENST00000554409 UQCRFS1P1P0C7P4 283 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 LBX1P52954 281 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 KIF23Q02241 960 aaPredicted RBP9.26□□□□□ -0.93
LINC00640-201ENST00000554409 OS9Q13438 667 aaPredicted RBP9.26□□□□□ -0.93
LINC00640-201ENST00000554409 DIXDC1Q155Q3 683 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 GORABQ5T7V8 394 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 LHX8Q68G74 356 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 ERC1Q8IUD2 1116 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 SPATA5Q8NB90 893 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 ZNF512BQ96KM6 892 aaPredicted RBP9.26□□□□□ -0.93
LINC00640-201ENST00000554409 TMEM39BQ9GZU3 492 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 HMG20BQ9P0W2 317 aa9.26□□□□□ -0.93
LINC00640-201ENST00000554409 ANGEL1Q9UNK9 670 aaKnown RBP9.26□□□□□ -0.93
LINC00640-201ENST00000554409 RFX7Q2KHR2 1363 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 IGSF3O75054 1194 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 USP2O75604 605 aaPredicted RBP9.25□□□□□ -0.93
LINC00640-201ENST00000554409 MCAMP43121 646 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 IREB2P48200 963 aaKnown RBP9.25□□□□□ -0.93
LINC00640-201ENST00000554409 PRKG1Q13976 671 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 HSP90AB4PQ58FF6 505 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 CCDC158Q5M9N0 1113 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 CDC42EP5Q6NZY7 148 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 SLF2Q8IX21 1173 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 ANKRD13AQ8IZ07 590 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 HOOK2Q96ED9 719 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 FAM163AQ96GL9 167 aaPredicted RBP9.25□□□□□ -0.93
LINC00640-201ENST00000554409 CSRNP1Q96S65 589 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 DBNDD2Q9BQY9 259 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 FZD1Q9UP38 647 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 MYO5AQ9Y4I1 1855 aaKnown RBP9.25□□□□□ -0.93
LINC00640-201ENST00000554409 PCNTO95613 3336 aa9.25□□□□□ -0.93
LINC00640-201ENST00000554409 FOCADQ5VW36 1801 aa9.24□□□□□ -0.93
LINC00640-201ENST00000554409 HMMRO75330 724 aa9.24□□□□□ -0.93
LINC00640-201ENST00000554409 ZBTB48P10074 688 aaPredicted RBP9.24□□□□□ -0.93
LINC00640-201ENST00000554409 TM4SF4P48230 202 aa9.24□□□□□ -0.93
LINC00640-201ENST00000554409 CACNB3P54284 484 aa9.24□□□□□ -0.93
LINC00640-201ENST00000554409 TTC39AQ5SRH9 613 aa9.24□□□□□ -0.93
LINC00640-201ENST00000554409 C20orf194Q5TEA3 1177 aa9.24□□□□□ -0.93
LINC00640-201ENST00000554409 IFFO2Q5TF58 517 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms