RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 TFCP2Q12800 502 aa12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 ZGPATQ8N5A5 531 aaKnown RBP12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 SSH3Q8TE77 659 aa12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 CSRNP1Q96S65 589 aa12.87□□□□□ -0.35
PTCD2P1-201ENST00000554393 C19orf67A6NJJ6 358 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 ADORA1P30542 326 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 TIMM10P62072 90 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 ATP8B2P98198 1209 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 G3BP1Q13283 466 aaKnown RBP eCLIP12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 NBPF12Q5TAG4 269 aaPredicted RBP12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 APOBEC3HQ6NTF7 200 aaKnown RBP12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 FAM83AQ86UY5 434 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 XAGE2Q96GT9 111 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 TEPSINQ96N21 525 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 MCOLN1Q9GZU1 580 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 TMOD2Q9NZR1 351 aa12.86□□□□□ -0.35
PTCD2P1-201ENST00000554393 LDHBP07195 334 aaKnown RBP12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 ZBTB48P10074 688 aaPredicted RBP12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 PRDX5P30044 214 aa12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 IREB2P48200 963 aaKnown RBP12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 RASGRF1Q13972 1273 aa12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 PRKG1Q13976 671 aa12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 RNF186Q9NXI6 227 aa12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 TSKSQ9UJT2 592 aa12.85□□□□□ -0.35
PTCD2P1-201ENST00000554393 AK9Q5TCS8 1911 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 DOCK2Q92608 1830 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 TCP10L2B9ZVM9 353 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 CD44P16070 742 aaKnown RBP12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 TM4SF4P48230 202 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 SREBF2Q12772 1141 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 SPRYD7Q5W111 196 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 ANKRD13AQ8IZ07 590 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 HOOK2Q96ED9 719 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 RTN4Q9NQC3 1192 aaKnown RBP12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 CIZ1Q9ULV3 898 aaPredicted RBP12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 NOP58Q9Y2X3 529 aaKnown RBP12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 DAGLAQ9Y4D2 1042 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 MAST2Q6P0Q8 1798 aa12.84□□□□□ -0.35
PTCD2P1-201ENST00000554393 USP2O75604 605 aaPredicted RBP12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 TRPA1O75762 1119 aa12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 ARID4AP29374 1257 aaPredicted RBP12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 INHBEP58166 350 aa12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 SPTY2D1Q68D10 685 aaPredicted RBP12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 SLC10A4Q96EP9 437 aa12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 TMEM39BQ9GZU3 492 aa12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 GAKO14976 1311 aa12.83□□□□□ -0.36
PTCD2P1-201ENST00000554393 MANSC4A6NHS7 340 aaPredicted RBP12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 UQCRFS1P1P0C7P4 283 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 DIXDC1Q155Q3 683 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 NOM1Q5C9Z4 860 aaKnown RBP12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 GORABQ5T7V8 394 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 SLF2Q8IX21 1173 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 PANK1Q8TE04 598 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 WNK4Q96J92 1243 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 CLMNQ96JQ2 1002 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 NEUROD6Q96NK8 337 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 CFHR5Q9BXR6 569 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 TSPYL2Q9H2G4 693 aaPredicted RBP12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 C1orf115Q9H7X2 142 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 RCAN3Q9UKA8 241 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 FZD1Q9UP38 647 aa12.82□□□□□ -0.36
PTCD2P1-201ENST00000554393 SURF6O75683 361 aaKnown RBP12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 CACNB3P54284 484 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 OS9Q13438 667 aaPredicted RBP12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 TNNI3KQ59H18 835 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 CEP85Q6P2H3 762 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 DZIP1Q86YF9 867 aaKnown RBP12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 CDAN1Q8IWY9 1227 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 SPATA5Q8NB90 893 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 FAM151AQ8WW52 585 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 FAM163AQ96GL9 167 aaPredicted RBP12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 HMG20BQ9P0W2 317 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 DDX19BQ9UMR2 479 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 FPGT-TNNI3KV9GXZ4 949 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 RFX7Q2KHR2 1363 aa12.81□□□□□ -0.36
PTCD2P1-201ENST00000554393 HAX1O00165 279 aa12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 IGSF3O75054 1194 aa12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 ALDH1A1P00352 501 aa12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 DCAF15Q66K64 600 aa12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 CDC42EP5Q6NZY7 148 aa12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 GCC1Q96CN9 775 aa12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 ZNF512BQ96KM6 892 aaPredicted RBP12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 CHMP4BQ9H444 224 aaKnown RBP12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 ABCF2Q9UG63 623 aa12.8□□□□□ -0.36
PTCD2P1-201ENST00000554393 MYO5AQ9Y4I1 1855 aaKnown RBP12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 MAP4K4O95819 1239 aaPredicted RBP12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 MAP3K9P80192 1104 aa12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 MKRN3Q13064 507 aaKnown RBP12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 VGLL4Q14135 290 aa12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 ERICH6Q7L0X2 663 aa12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 IDI2Q9BXS1 227 aa12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 CSADQ9Y600 493 aa12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 MROH7-TTC4A0A0A0MT08 1334 aa12.79□□□□□ -0.36
PTCD2P1-201ENST00000554393 FOCADQ5VW36 1801 aa12.78□□□□□ -0.36
PTCD2P1-201ENST00000554393 MCAMP43121 646 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms