RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 ARHGEF15O94989 841 aa7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 ESRRAP11474 423 aaPredicted RBP7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 MSL1Q68DK7 614 aa7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 FAM117BQ6P1L5 589 aa7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 ANKRD24Q8TF21 1146 aa7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 NECAB3Q96P71 396 aaPredicted RBP7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 COPRSQ9NQ92 184 aa7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 ENAMQ9NRM1 1142 aa7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 PCDHGB7Q9Y5F8 929 aa7.52□□□□□ -1.21
MTHFD1-206ENST00000554353 GOLGA3Q08378 1498 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 SOX1O00570 391 aaPredicted RBP7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 ENC1O14682 589 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 B3GALT4O96024 378 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 RASSF7Q02833 373 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 RAD51AP2Q09MP3 1159 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 RELL1Q8IUW5 271 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 DMRTC2Q8IXT2 367 aaPredicted RBP7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 CCSER2Q9H7U1 834 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 KBTBD4Q9NVX7 518 aa7.51□□□□□ -1.21
MTHFD1-206ENST00000554353 COL17A1Q9UMD9 1497 aaPredicted RBP7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 PAGE1O75459 146 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 GBP2P32456 591 aaPredicted RBP7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 ARL4DP49703 201 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 GSTM4Q03013 218 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 HGSNATQ68CP4 663 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 ERMP1Q7Z2K6 904 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 DDX54Q8TDD1 881 aaKnown RBP7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 CARD10Q9BWT7 1032 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 TGIF2Q9GZN2 237 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 PRDM6Q9NQX0 595 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 USP35Q9P2H5 1018 aa7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 DDX41Q9UJV9 622 aaKnown RBP7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.5□□□□□ -1.21
MTHFD1-206ENST00000554353 MINDY4BA8MYZ0 360 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 RLBP1P12271 317 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 DGKGP49619 791 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 RACK1P63244 317 aaKnown RBP7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 TTBK2Q6IQ55 1244 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 ZNF654Q8IZM8 581 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 RSRP1Q9BUV0 290 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 ACBD3Q9H3P7 528 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 CBX8Q9HC52 389 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 SAMM50Q9Y512 469 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 TEX14Q8IWB6 1497 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 PRXQ9BXM0 1461 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 WDR7Q9Y4E6 1490 aa7.49□□□□□ -1.21
MTHFD1-206ENST00000554353 FSCN2O14926 492 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 ABCA8O94911 1581 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 NID1P14543 1247 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 LMNB1P20700 586 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 LIG3P49916 1009 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 ZC3H6P61129 1189 aaKnown RBP7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 PIP4K2BP78356 416 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 C19orf57Q0VDD7 668 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 PWP1Q13610 501 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 TRAPPC3LQ5T215 181 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 PCNX4Q63HM2 1172 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 SULF2Q8IWU5 870 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 TMEM74Q96NL1 305 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 ADAMTS8Q9UP79 889 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 TLR6Q9Y2C9 796 aa7.48□□□□□ -1.21
MTHFD1-206ENST00000554353 CFAP43Q8NDM7 1665 aa7.47□□□□□ -1.21
MTHFD1-206ENST00000554353 NME2P22392 152 aa7.47□□□□□ -1.21
MTHFD1-206ENST00000554353 ZEB1P37275 1124 aaPredicted RBP7.47□□□□□ -1.21
MTHFD1-206ENST00000554353 COL9A3Q14050 684 aaPredicted RBP7.47□□□□□ -1.21
MTHFD1-206ENST00000554353 SRA1Q9HD15 236 aaKnown RBP7.47□□□□□ -1.21
MTHFD1-206ENST00000554353 ADGRL1O94910 1474 aa7.47□□□□□ -1.21
MTHFD1-206ENST00000554353 CD109Q6YHK3 1445 aa7.46□□□□□ -1.21
MTHFD1-206ENST00000554353 IGHA1P01876 353 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 HOXB4P17483 251 aaPredicted RBP7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 TNNI2P48788 182 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 SNRPNP63162 240 aaKnown RBP7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 FAM160A1Q05DH4 1040 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 SETDB1Q15047 1291 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 PHC3Q8NDX5 983 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 STK35Q8TDR2 534 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 WNT8BQ93098 351 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 CAPN10Q9HC96 672 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 OSGEPQ9NPF4 335 aa7.46□□□□□ -1.22
MTHFD1-206ENST00000554353 ARNTP27540 789 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 AP3B2Q13367 1082 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 NAALADL2Q58DX5 795 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 RASIP1Q5U651 963 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 KLHL23Q8NBE8 558 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 GALNT11Q8NCW6 608 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 KLHDC7BQ96G42 594 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 PUS7Q96PZ0 661 aaKnown RBP7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 EMILIN2Q9BXX0 1053 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 ZC3H12CQ9C0D7 883 aaKnown RBP7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 SOX17Q9H6I2 414 aaPredicted RBP7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 INPP5FQ9Y2H2 1132 aa7.45□□□□□ -1.22
MTHFD1-206ENST00000554353 MAGI3Q5TCQ9 1506 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 PF4P02776 101 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 TFE3P19532 575 aaPredicted RBP7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 BMP6P22004 513 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 EIF4A3P38919 411 aaKnown RBP7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 NLRP12P59046 1061 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 LRRC14Q15048 493 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 SNAP47Q5SQN1 464 aa7.44□□□□□ -1.22
MTHFD1-206ENST00000554353 LLGL2Q6P1M3 1020 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms