RNA–Protein interactions for RNA: ENST00000554293.1

SEL1L-202, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 5

Gene SEL1L, Length 767 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-202ENST00000554293 PDGFAP04085 211 aa8.5□□□□□ -1.05
SEL1L-202ENST00000554293 RPLP1P05386 114 aaKnown RBP8.5□□□□□ -1.05
SEL1L-202ENST00000554293 PCSK2P16519 638 aa8.5□□□□□ -1.05
SEL1L-202ENST00000554293 ZC3H6P61129 1189 aaKnown RBP8.5□□□□□ -1.05
SEL1L-202ENST00000554293 DNM1Q05193 864 aaKnown RBP8.5□□□□□ -1.05
SEL1L-202ENST00000554293 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
SEL1L-202ENST00000554293 NSFL1CQ9UNZ2 370 aaKnown RBP8.5□□□□□ -1.05
SEL1L-202ENST00000554293 USP20Q9Y2K6 914 aa8.5□□□□□ -1.05
SEL1L-202ENST00000554293 FAM208AQ9UK61 1670 aaKnown RBP8.49□□□□□ -1.05
SEL1L-202ENST00000554293 DISP2A7MBM2 1401 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 BMP4P12644 408 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 USP5P45974 858 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 RNFT1Q5M7Z0 435 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 NLRP13Q86W25 1043 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 CMTR1Q8N1G2 835 aaKnown RBP8.49□□□□□ -1.05
SEL1L-202ENST00000554293 POLIQ9UNA4 740 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 KCNMB2Q9Y691 235 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 KIF20BQ96Q89 1820 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 MYOM1P52179 1685 aa8.49□□□□□ -1.05
SEL1L-202ENST00000554293 CRB1P82279 1406 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 MAP2K3P46734 347 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 CTBSQ01459 385 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 SPEM2Q0P670 501 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 TRIP4Q15650 581 aaPredicted RBP8.48□□□□□ -1.05
SEL1L-202ENST00000554293 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 TREML4Q6UXN2 200 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 DEFB132Q7Z7B7 95 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 CCDC87Q9NVE4 849 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 DCTN4Q9UJW0 460 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 FNDC3AQ9Y2H6 1198 aaKnown RBP8.48□□□□□ -1.05
SEL1L-202ENST00000554293 AATKQ6ZMQ8 1374 aa8.48□□□□□ -1.05
SEL1L-202ENST00000554293 EGFRP00533 1210 aa8.47□□□□□ -1.05
SEL1L-202ENST00000554293 GCP02774 474 aa8.47□□□□□ -1.05
SEL1L-202ENST00000554293 CCINQ13939 588 aa8.47□□□□□ -1.05
SEL1L-202ENST00000554293 SLC30A3Q99726 388 aa8.47□□□□□ -1.05
SEL1L-202ENST00000554293 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
SEL1L-202ENST00000554293 TTC21BQ7Z4L5 1316 aa8.47□□□□□ -1.05
SEL1L-202ENST00000554293 KTN1Q86UP2 1357 aaKnown RBP8.47□□□□□ -1.05
SEL1L-202ENST00000554293 RGPD2P0DJD1 1756 aa8.46□□□□□ -1.05
SEL1L-202ENST00000554293 XYLBO75191 536 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 MAPK1P28482 360 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 GMPRP36959 345 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 KRT76Q01546 638 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 SRSF11Q05519 484 aaKnown RBP8.46□□□□□ -1.06
SEL1L-202ENST00000554293 EHHADHQ08426 723 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 GRIN2CQ14957 1233 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 GJD3Q8N144 294 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 TTC16Q8NEE8 873 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 PNMA5Q96PV4 448 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 CITED4Q96RK1 184 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 RBCK1Q9BYM8 510 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 GSX2Q9BZM3 304 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 AVENQ9NQS1 362 aaPredicted RBP8.46□□□□□ -1.06
SEL1L-202ENST00000554293 TTC21AQ8NDW8 1320 aa8.46□□□□□ -1.06
SEL1L-202ENST00000554293 C2CD2LO14523 706 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 TMCO4Q5TGY1 634 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 ZNF468Q5VIY5 522 aaPredicted RBP8.45□□□□□ -1.06
SEL1L-202ENST00000554293 PRR12Q9ULL5 1215 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 NHSQ6T4R5 1651 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 A0A1W2PP64 1363 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 USP31Q70CQ4 1352 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 OVOS2A0A0J9YW53 1432 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 OVOS2Q6IE36 1432 aa8.45□□□□□ -1.06
SEL1L-202ENST00000554293 EDC4Q6P2E9 1401 aaKnown RBP8.45□□□□□ -1.06
SEL1L-202ENST00000554293 SHANK3Q9BYB0 1731 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 ARAFP10398 606 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 BAG6P46379 1132 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 MARSP56192 900 aaKnown RBP8.44□□□□□ -1.06
SEL1L-202ENST00000554293 EVA1CP58658 441 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 PDE3BQ13370 1112 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 CCDC27Q2M243 656 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 LCE2AQ5TA79 106 aaPredicted RBP8.44□□□□□ -1.06
SEL1L-202ENST00000554293 PDE12Q6L8Q7 609 aaKnown RBP8.44□□□□□ -1.06
SEL1L-202ENST00000554293 RAB44Q7Z6P3 723 aaPredicted RBP8.44□□□□□ -1.06
SEL1L-202ENST00000554293 TCP11L2Q8N4U5 519 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 BHMTQ93088 406 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 USP35Q9P2H5 1018 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.44□□□□□ -1.06
SEL1L-202ENST00000554293 OVOS2A0A0G2JMS6 1433 aa8.44□□□□□ -1.06
SEL1L-202ENST00000554293 KAT6BQ8WYB5 2073 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 RARAP10276 462 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 NFKB1P19838 968 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 C8orf34Q49A92 452 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 ZNF438Q7Z4V0 828 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 FAM129BQ96TA1 746 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 GGNBP2Q9H3C7 697 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 THRAP3Q9Y2W1 955 aaKnown RBP8.43□□□□□ -1.06
SEL1L-202ENST00000554293 WDR17Q8IZU2 1322 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 PARD3Q8TEW0 1356 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 NINLQ9Y2I6 1382 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 ANKRD26Q9UPS8 1709 aa8.43□□□□□ -1.06
SEL1L-202ENST00000554293 ADH6P28332 368 aa8.42□□□□□ -1.06
SEL1L-202ENST00000554293 XKR5Q6UX68 686 aa8.42□□□□□ -1.06
SEL1L-202ENST00000554293 FAM196AQ6ZSG2 479 aa8.42□□□□□ -1.06
SEL1L-202ENST00000554293 KRT25Q7Z3Z0 450 aa8.42□□□□□ -1.06
SEL1L-202ENST00000554293 SYT9Q86SS6 491 aa8.42□□□□□ -1.06
SEL1L-202ENST00000554293 ARHGEF25Q86VW2 580 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms