RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 TNPO2O14787 897 aaKnown RBP21.61■■□□□ 1.05
NEK9-204ENST00000554258 IL1R1P14778 569 aa21.61■■□□□ 1.05
NEK9-204ENST00000554258 HOXD11P31277 338 aaPredicted RBP21.61■■□□□ 1.05
NEK9-204ENST00000554258 MDM2Q00987 491 aaPredicted RBP21.61■■□□□ 1.05
NEK9-204ENST00000554258 DZIP1LQ8IYY4 767 aaKnown RBP21.61■■□□□ 1.05
NEK9-204ENST00000554258 MRS2Q9HD23 443 aa21.61■■□□□ 1.05
NEK9-204ENST00000554258 SERPINA10Q9UK55 444 aa21.61■■□□□ 1.05
NEK9-204ENST00000554258 DNAH12Q6ZR08 3092 aa21.61■■□□□ 1.05
NEK9-204ENST00000554258 CYP2C8P10632 490 aa21.6■■□□□ 1.05
NEK9-204ENST00000554258 CHRNDQ07001 517 aa21.6■■□□□ 1.05
NEK9-204ENST00000554258 PHAXQ9H814 394 aaKnown RBP21.6■■□□□ 1.05
NEK9-204ENST00000554258 TTF2Q9UNY4 1162 aaKnown RBP21.6■■□□□ 1.05
NEK9-204ENST00000554258 SNAP23O00161 211 aa21.59■■□□□ 1.05
NEK9-204ENST00000554258 BDP1A6H8Y1 2624 aa21.58■■□□□ 1.05
NEK9-204ENST00000554258 TJAP1Q5JTD0 557 aa21.58■■□□□ 1.05
NEK9-204ENST00000554258 C15orf52Q6ZUT6 534 aaKnown RBP21.58■■□□□ 1.05
NEK9-204ENST00000554258 HOOK2Q96ED9 719 aa21.58■■□□□ 1.05
NEK9-204ENST00000554258 METTL22Q9BUU2 404 aaPredicted RBP21.58■■□□□ 1.05
NEK9-204ENST00000554258 KCNH4Q9UQ05 1017 aa21.58■■□□□ 1.05
NEK9-204ENST00000554258 MYLIPQ8WY64 445 aa21.57■■□□□ 1.04
NEK9-204ENST00000554258 ITGA6P23229 1130 aa21.56■■□□□ 1.04
NEK9-204ENST00000554258 MOGSQ13724 837 aa21.56■■□□□ 1.04
NEK9-204ENST00000554258 MFSD14BQ5SR56 506 aa21.56■■□□□ 1.04
NEK9-204ENST00000554258 DUSP27Q5VZP5 1158 aa21.56■■□□□ 1.04
NEK9-204ENST00000554258 DCAF15Q66K64 600 aa21.56■■□□□ 1.04
NEK9-204ENST00000554258 A0A1B0GUL6 1792 aa21.56■■□□□ 1.04
NEK9-204ENST00000554258 TAF5LO75529 589 aa21.55■■□□□ 1.04
NEK9-204ENST00000554258 SEMA6BQ9H3T3 888 aa21.55■■□□□ 1.04
NEK9-204ENST00000554258 FOSL2P15408 326 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 INPP5BP32019 993 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 TMPOP42166 694 aaKnown RBP21.54■■□□□ 1.04
NEK9-204ENST00000554258 CRKP46108 304 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 CACNB3P54284 484 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 MAP3K12Q12852 859 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 COA7Q96BR5 231 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 ZNF341Q9BYN7 854 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 ADAMTS8Q9UP79 889 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 PFASO15067 1338 aa21.54■■□□□ 1.04
NEK9-204ENST00000554258 PIEZO1Q92508 2521 aa21.53■■□□□ 1.04
NEK9-204ENST00000554258 LBHD1Q9BQE6 289 aaPredicted RBP21.53■■□□□ 1.04
NEK9-204ENST00000554258 HMX1Q9NP08 348 aaPredicted RBP21.53■■□□□ 1.04
NEK9-204ENST00000554258 AK9Q5TCS8 1911 aa21.53■■□□□ 1.04
NEK9-204ENST00000554258 DDX58O95786 925 aaKnown RBP21.52■■□□□ 1.04
NEK9-204ENST00000554258 HMGCRP04035 888 aa21.52■■□□□ 1.04
NEK9-204ENST00000554258 WDR43Q15061 677 aaKnown RBP eCLIP21.52■■□□□ 1.04
NEK9-204ENST00000554258 GPAT2Q6NUI2 795 aa21.52■■□□□ 1.04
NEK9-204ENST00000554258 MIGA2Q7L4E1 593 aa21.51■■□□□ 1.03
NEK9-204ENST00000554258 TMOD2Q9NZR1 351 aa21.51■■□□□ 1.03
NEK9-204ENST00000554258 OGDHLQ9ULD0 1010 aa21.51■■□□□ 1.03
NEK9-204ENST00000554258 MAP3K2Q9Y2U5 619 aa21.5■■□□□ 1.03
NEK9-204ENST00000554258 IGKV5-2P06315 115 aa21.49■■□□□ 1.03
NEK9-204ENST00000554258 UBE3BQ7Z3V4 1068 aa21.49■■□□□ 1.03
NEK9-204ENST00000554258 FAM83AQ86UY5 434 aa21.49■■□□□ 1.03
NEK9-204ENST00000554258 NEUROD2Q15784 382 aa21.48■■□□□ 1.03
NEK9-204ENST00000554258 LRRC26Q2I0M4 334 aa21.48■■□□□ 1.03
NEK9-204ENST00000554258 SMCR8Q8TEV9 937 aaPredicted RBP21.48■■□□□ 1.03
NEK9-204ENST00000554258 CXCL11O14625 94 aa21.46■■□□□ 1.03
NEK9-204ENST00000554258 NEXNQ0ZGT2 675 aa21.46■■□□□ 1.03
NEK9-204ENST00000554258 TRIM32Q13049 653 aa21.46■■□□□ 1.03
NEK9-204ENST00000554258 FASTKD5Q7L8L6 764 aaKnown RBP21.46■■□□□ 1.03
NEK9-204ENST00000554258 TTYH1Q9H313 450 aaPredicted RBP21.46■■□□□ 1.03
NEK9-204ENST00000554258 RPAP1Q9BWH6 1393 aaPredicted RBP21.46■■□□□ 1.03
NEK9-204ENST00000554258 ANKRD18BA2A2Z9 1011 aa21.45■■□□□ 1.02
NEK9-204ENST00000554258 COL6A1P12109 1028 aa21.45■■□□□ 1.02
NEK9-204ENST00000554258 CWF19L2Q2TBE0 894 aaKnown RBP21.45■■□□□ 1.02
NEK9-204ENST00000554258 H7C1W4 665 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 FKBP1CQ5VVH2 108 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 GADL1Q6ZQY3 521 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 ANKRD13CQ8N6S4 541 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 TDRD7Q8NHU6 1098 aaKnown RBP21.44■■□□□ 1.02
NEK9-204ENST00000554258 TEKT1Q969V4 418 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 RUNDC1Q96C34 613 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 ZNF112Q9UJU3 913 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 PTPRFP10586 1907 aa21.44■■□□□ 1.02
NEK9-204ENST00000554258 NOL9Q5SY16 702 aaKnown RBP21.43■■□□□ 1.02
NEK9-204ENST00000554258 PLA2G12BQ9BX93 195 aa21.43■■□□□ 1.02
NEK9-204ENST00000554258 SLC45A1Q9Y2W3 748 aa21.43■■□□□ 1.02
NEK9-204ENST00000554258 A0A0G2JLL6 359 aaPredicted RBP21.42■■□□□ 1.02
NEK9-204ENST00000554258 NEURL1BA8MQ27 555 aa21.42■■□□□ 1.02
NEK9-204ENST00000554258 CSF1RP07333 972 aa21.42■■□□□ 1.02
NEK9-204ENST00000554258 HDLBPQ00341 1268 aaKnown RBP21.42■■□□□ 1.02
NEK9-204ENST00000554258 KSR2Q6VAB6 950 aa21.42■■□□□ 1.02
NEK9-204ENST00000554258 PRRT2Q7Z6L0 340 aaPredicted RBP21.42■■□□□ 1.02
NEK9-204ENST00000554258 FAM9BQ8IZU0 186 aa21.42■■□□□ 1.02
NEK9-204ENST00000554258 USP38Q8NB14 1042 aa21.42■■□□□ 1.02
NEK9-204ENST00000554258 MAST2Q6P0Q8 1798 aa21.41■■□□□ 1.02
NEK9-204ENST00000554258 SYNGAP1Q96PV0 1343 aa21.41■■□□□ 1.02
NEK9-204ENST00000554258 PI4KAP2A4QPH2 592 aa21.41■■□□□ 1.02
NEK9-204ENST00000554258 ELL2O00472 640 aaPredicted RBP21.41■■□□□ 1.02
NEK9-204ENST00000554258 PLIN1O60240 522 aa21.41■■□□□ 1.02
NEK9-204ENST00000554258 GRIK5Q16478 980 aa21.41■■□□□ 1.02
NEK9-204ENST00000554258 PI4KAP1Q8N8J0 262 aa21.41■■□□□ 1.02
NEK9-204ENST00000554258 LTBP2Q14767 1821 aa21.41■■□□□ 1.02
NEK9-204ENST00000554258 SMAD3P84022 425 aaKnown RBP21.4■■□□□ 1.02
NEK9-204ENST00000554258 SHHQ15465 462 aa21.4■■□□□ 1.02
NEK9-204ENST00000554258 ZDHHC15Q96MV8 337 aa21.4■■□□□ 1.02
NEK9-204ENST00000554258 PRKAG2Q9UGJ0 569 aa21.4■■□□□ 1.02
NEK9-204ENST00000554258 PRKAR2AP13861 404 aaKnown RBP21.39■■□□□ 1.01
NEK9-204ENST00000554258 HIBADHP31937 336 aaKnown RBP21.39■■□□□ 1.01
NEK9-204ENST00000554258 GYG1P46976 350 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms