RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 GTF2E1P29083 439 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-224ENST00000554040 PIP4K2AP48426 406 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-224ENST00000554040 HIRAP54198 1017 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-224ENST00000554040 HUNKP57058 714 aa9.25□□□□□ -0.93
ATXN3-224ENST00000554040 KRT76Q01546 638 aa9.25□□□□□ -0.93
ATXN3-224ENST00000554040 NIM1KQ8IY84 436 aa9.25□□□□□ -0.93
ATXN3-224ENST00000554040 NBPF15Q8N660 670 aa9.25□□□□□ -0.93
ATXN3-224ENST00000554040 KDF1Q8NAX2 398 aaPredicted RBP9.25□□□□□ -0.93
ATXN3-224ENST00000554040 ESPNB1AK53 854 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 FAM155AB1AL88 458 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-224ENST00000554040 KCNQ3O43525 872 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 LILRA1O75019 489 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 TRPA1O75762 1119 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 HOXA10P31260 410 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-224ENST00000554040 CTSOP43234 321 aaPredicted RBP9.24□□□□□ -0.93
ATXN3-224ENST00000554040 CXCL9Q07325 125 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 RGMBQ6NW40 437 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 CTU1Q7Z7A3 348 aaKnown RBP9.24□□□□□ -0.93
ATXN3-224ENST00000554040 VPS33BQ9H267 617 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 RNF186Q9NXI6 227 aa9.24□□□□□ -0.93
ATXN3-224ENST00000554040 COL4A5P29400 1685 aa9.23□□□□□ -0.93
ATXN3-224ENST00000554040 GNAT3A8MTJ3 354 aa9.23□□□□□ -0.93
ATXN3-224ENST00000554040 PPIP5K2O43314 1243 aa9.23□□□□□ -0.93
ATXN3-224ENST00000554040 ADD1P35611 737 aaKnown RBP9.23□□□□□ -0.93
ATXN3-224ENST00000554040 GMPSP49915 693 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-224ENST00000554040 KIF23Q02241 960 aaPredicted RBP9.23□□□□□ -0.93
ATXN3-224ENST00000554040 USP48Q86UV5 1035 aa9.23□□□□□ -0.93
ATXN3-224ENST00000554040 ZNRF3Q9ULT6 936 aa9.23□□□□□ -0.93
ATXN3-224ENST00000554040 CACNA1SQ13698 1873 aa9.23□□□□□ -0.93
ATXN3-224ENST00000554040 ARFGEF2Q9Y6D5 1785 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 TRPM7Q96QT4 1865 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 FAM181BA6NEQ2 426 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 BTBD11A6QL63 1104 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 ERVH48-1M5A8F1 160 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 RELBQ01201 579 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 PKN2Q16513 984 aaKnown RBP9.22□□□□□ -0.93
ATXN3-224ENST00000554040 HLFQ16534 295 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 AOC3Q16853 763 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 NBPF20Q3BBV1 942 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 HABP4Q5JVS0 413 aaKnown RBP9.22□□□□□ -0.93
ATXN3-224ENST00000554040 TRPM4Q8TD43 1214 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 RPGRQ92834 1020 aaKnown RBP9.22□□□□□ -0.93
ATXN3-224ENST00000554040 RBM17Q96I25 401 aaKnown RBP9.22□□□□□ -0.93
ATXN3-224ENST00000554040 CSRNP1Q96S65 589 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 INSM2Q96T92 566 aaPredicted RBP9.22□□□□□ -0.93
ATXN3-224ENST00000554040 NYXQ9GZU5 481 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 SCN7AQ01118 1682 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 NPC1L1Q9UHC9 1359 aa9.22□□□□□ -0.93
ATXN3-224ENST00000554040 MKI67P46013 3256 aaKnown RBP9.21□□□□□ -0.93
ATXN3-224ENST00000554040 PRAMEF22A3QJZ6 481 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 SLC35F4A4IF30 521 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 TCERG1O14776 1098 aaKnown RBP9.21□□□□□ -0.94
ATXN3-224ENST00000554040 SNRPA1P09661 255 aaKnown RBP9.21□□□□□ -0.94
ATXN3-224ENST00000554040 NBPF10Q6P3W6 841 aaKnown RBP9.21□□□□□ -0.94
ATXN3-224ENST00000554040 CCDC155Q8N6L0 562 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 GAS2L2Q8NHY3 880 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 CRAMP1Q96RY5 1269 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 BCL2L13Q9BXK5 485 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 CNOT7Q9UIV1 285 aaKnown RBP9.21□□□□□ -0.94
ATXN3-224ENST00000554040 KIF7Q2M1P5 1343 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 CDHR2Q9BYE9 1310 aa9.21□□□□□ -0.94
ATXN3-224ENST00000554040 DIAPH1O60610 1272 aaKnown RBP9.2□□□□□ -0.94
ATXN3-224ENST00000554040 ZNF157P51786 506 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-224ENST00000554040 RAB15P59190 212 aa9.2□□□□□ -0.94
ATXN3-224ENST00000554040 TNIP1Q15025 636 aa9.2□□□□□ -0.94
ATXN3-224ENST00000554040 DLK2Q6UY11 383 aa9.2□□□□□ -0.94
ATXN3-224ENST00000554040 SLC51AQ86UW1 340 aa9.2□□□□□ -0.94
ATXN3-224ENST00000554040 C2orf69Q8N8R5 385 aa9.2□□□□□ -0.94
ATXN3-224ENST00000554040 RNF217Q8TC41 542 aa9.2□□□□□ -0.94
ATXN3-224ENST00000554040 NANOS1Q8WY41 292 aaKnown RBP9.2□□□□□ -0.94
ATXN3-224ENST00000554040 PCMTD1Q96MG8 357 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-224ENST00000554040 RTFDC1Q9BY42 306 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-224ENST00000554040 TMX4Q9H1E5 349 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-224ENST00000554040 GBA2Q9HCG7 927 aaPredicted RBP9.2□□□□□ -0.94
ATXN3-224ENST00000554040 KNSTRNQ9Y448 316 aa9.2□□□□□ -0.94
ATXN3-224ENST00000554040 UBR2Q8IWV8 1755 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 H7C1D1 291 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 ADH1AP07327 375 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 TMEM259Q4ZIN3 620 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 FOXD4L5Q5VV16 416 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-224ENST00000554040 PNMA1Q8ND90 353 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 SUPT20HQ8NEM7 779 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 IL27Q8NEV9 243 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 ZNF395Q9H8N7 513 aaPredicted RBP9.19□□□□□ -0.94
ATXN3-224ENST00000554040 ATP6V0A2Q9Y487 856 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 CEMIPQ8WUJ3 1361 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 ABCC12Q96J65 1359 aa9.19□□□□□ -0.94
ATXN3-224ENST00000554040 SHTN1A0MZ66 631 aa9.18□□□□□ -0.94
ATXN3-224ENST00000554040 ERVV-1B6SEH8 477 aa9.18□□□□□ -0.94
ATXN3-224ENST00000554040 GPR37L1O60883 481 aa9.18□□□□□ -0.94
ATXN3-224ENST00000554040 RAD17O75943 681 aa9.18□□□□□ -0.94
ATXN3-224ENST00000554040 NEUROD2Q15784 382 aa9.18□□□□□ -0.94
ATXN3-224ENST00000554040 KRT26Q7Z3Y9 468 aa9.18□□□□□ -0.94
ATXN3-224ENST00000554040 HDAC9Q9UKV0 1011 aa9.18□□□□□ -0.94
ATXN3-224ENST00000554040 KIAA2012Q0VF49 1180 aa9.17□□□□□ -0.94
ATXN3-224ENST00000554040 SUSD4Q5VX71 490 aa9.17□□□□□ -0.94
ATXN3-224ENST00000554040 DPF2Q92785 391 aa9.17□□□□□ -0.94
ATXN3-224ENST00000554040 BBOX1O75936 387 aa9.16□□□□□ -0.94
ATXN3-224ENST00000554040 FBXO45P0C2W1 286 aa9.16□□□□□ -0.94
ATXN3-224ENST00000554040 PTGIRP43119 386 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms