RNA–Protein interactions for RNA: ENST00000553726.5

PRKCH-205, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-205ENST00000553726 KIF24Q5T7B8 1368 aa9.67□□□□□ -0.86
PRKCH-205ENST00000553726 PPP1R12BO60237 982 aaPredicted RBP9.67□□□□□ -0.86
PRKCH-205ENST00000553726 HOXB4P17483 251 aaPredicted RBP9.67□□□□□ -0.86
PRKCH-205ENST00000553726 ZNF468Q5VIY5 522 aaPredicted RBP9.67□□□□□ -0.86
PRKCH-205ENST00000553726 MAP3K5Q99683 1374 aa9.66□□□□□ -0.86
PRKCH-205ENST00000553726 C21orf2O43822 256 aa9.66□□□□□ -0.86
PRKCH-205ENST00000553726 LINC00114Q6XXX2 140 aa9.66□□□□□ -0.86
PRKCH-205ENST00000553726 FCHSD1Q86WN1 690 aa9.66□□□□□ -0.86
PRKCH-205ENST00000553726 RAPGEF4Q8WZA2 1011 aa9.66□□□□□ -0.86
PRKCH-205ENST00000553726 SYTL4Q96C24 671 aaPredicted RBP9.66□□□□□ -0.86
PRKCH-205ENST00000553726 PHACTR1Q9C0D0 580 aa9.66□□□□□ -0.86
PRKCH-205ENST00000553726 RGPD2P0DJD1 1756 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 LY75O60449 1722 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 USP47Q96K76 1375 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 POLD1P28340 1107 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 PCBP4P57723 403 aaKnown RBP9.65□□□□□ -0.86
PRKCH-205ENST00000553726 PTK7Q13308 1070 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 PLA2G4EQ3MJ16 856 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 CRTC2Q53ET0 693 aaPredicted RBP9.65□□□□□ -0.86
PRKCH-205ENST00000553726 NBPF6Q5VWK0 638 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 STAG2Q8N3U4 1231 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 GAS2L2Q8NHY3 880 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 NBPF4Q96M43 638 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 GGNBP2Q9H3C7 697 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 TFCP2L1Q9NZI6 479 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 ANKIB1Q9P2G1 1089 aa9.65□□□□□ -0.86
PRKCH-205ENST00000553726 INSRP06213 1382 aa9.64□□□□□ -0.87
PRKCH-205ENST00000553726 CHD4Q14839 1912 aa9.64□□□□□ -0.87
PRKCH-205ENST00000553726 FBLN1P23142 703 aa9.64□□□□□ -0.87
PRKCH-205ENST00000553726 LMOD1P29536 600 aaPredicted RBP9.64□□□□□ -0.87
PRKCH-205ENST00000553726 ZNF827Q17R98 1081 aa9.64□□□□□ -0.87
PRKCH-205ENST00000553726 ALYREFQ86V81 257 aaKnown RBP9.64□□□□□ -0.87
PRKCH-205ENST00000553726 SCG3Q8WXD2 468 aaKnown RBP9.64□□□□□ -0.87
PRKCH-205ENST00000553726 VRTNQ9H8Y1 702 aa9.64□□□□□ -0.87
PRKCH-205ENST00000553726 DOT1LQ8TEK3 1739 aa9.64□□□□□ -0.87
PRKCH-205ENST00000553726 FLT4P35916 1363 aa9.63□□□□□ -0.87
PRKCH-205ENST00000553726 KIF20BQ96Q89 1820 aa9.63□□□□□ -0.87
PRKCH-205ENST00000553726 COL24A1Q17RW2 1714 aa9.63□□□□□ -0.87
PRKCH-205ENST00000553726 PIK3R2O00459 728 aa9.63□□□□□ -0.87
PRKCH-205ENST00000553726 RRS1Q15050 365 aaKnown RBP9.63□□□□□ -0.87
PRKCH-205ENST00000553726 CHSY3Q70JA7 882 aa9.63□□□□□ -0.87
PRKCH-205ENST00000553726 C2orf49Q9BVC5 232 aaPredicted RBP9.63□□□□□ -0.87
PRKCH-205ENST00000553726 SHANK3Q9BYB0 1731 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 PCDH11XQ9BZA7 1347 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 PCDH11YQ9BZA8 1340 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 FAM196BA6NMK8 535 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 GNB5O14775 395 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 DGKGP49619 791 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 SFSWAPQ12872 951 aaKnown RBP9.62□□□□□ -0.87
PRKCH-205ENST00000553726 DPYDQ12882 1025 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 ALDH16A1Q8IZ83 802 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 FLAD1Q8NFF5 587 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 SUSD3Q96L08 255 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 HINFPQ9BQA5 517 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 CCNL1Q9UK58 526 aaPredicted RBP9.62□□□□□ -0.87
PRKCH-205ENST00000553726 NSD2O96028 1365 aa9.62□□□□□ -0.87
PRKCH-205ENST00000553726 MEGF6O75095 1541 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 PNPLA7Q6ZV29 1317 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L21D6R901 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 MSTNO14793 375 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 ITGB2P05107 769 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 COL8A1P27658 744 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 HSP90AB2PQ58FF8 381 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 SYT9Q86SS6 491 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 ANKMY2Q8IV38 441 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 HSH2DQ96JZ2 352 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 CEP63Q96MT8 703 aa9.61□□□□□ -0.87
PRKCH-205ENST00000553726 GRIN2CQ14957 1233 aa9.6□□□□□ -0.87
PRKCH-205ENST00000553726 GPR162Q16538 588 aa9.6□□□□□ -0.87
PRKCH-205ENST00000553726 ZNF280CQ8ND82 737 aa9.6□□□□□ -0.87
PRKCH-205ENST00000553726 SMARCC1Q92922 1105 aaPredicted RBP9.6□□□□□ -0.87
PRKCH-205ENST00000553726 SUV39H2Q9H5I1 410 aa9.6□□□□□ -0.87
PRKCH-205ENST00000553726 BRD7Q9NPI1 651 aa9.6□□□□□ -0.87
PRKCH-205ENST00000553726 SPG7Q9UQ90 795 aa9.6□□□□□ -0.87
PRKCH-205ENST00000553726 WASHC2AQ641Q2 1341 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 MAP2P11137 1827 aaKnown RBP9.59□□□□□ -0.87
PRKCH-205ENST00000553726 TUBGCP6Q96RT7 1819 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 ELOA3CA0A087WX78 387 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-205ENST00000553726 KRBA1A5PL33 1030 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 ELOA3DA6NLF2 546 aaPredicted RBP9.59□□□□□ -0.87
PRKCH-205ENST00000553726 SIN3BO75182 1162 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 KCNQ4P56696 695 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 SUZ12Q15022 739 aaKnown RBP9.59□□□□□ -0.87
PRKCH-205ENST00000553726 ELOA3BQ3SY89 546 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 USHBP1Q8N6Y0 703 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 ELOA3Q8NG57 546 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 SLC30A3Q99726 388 aa9.59□□□□□ -0.87
PRKCH-205ENST00000553726 GRIN3BO60391 1043 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms