RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 FAM83AQ86UY5 434 aa17.63■□□□□ 0.41
PRPF39-204ENST00000553605 TDHQ8IZJ6 230 aa17.63■□□□□ 0.41
PRPF39-204ENST00000553605 PARK7Q99497 189 aaKnown RBP17.63■□□□□ 0.41
PRPF39-204ENST00000553605 ZNF341Q9BYN7 854 aa17.63■□□□□ 0.41
PRPF39-204ENST00000553605 PAK6Q9NQU5 681 aaPredicted RBP17.63■□□□□ 0.41
PRPF39-204ENST00000553605 KCNH4Q9UQ05 1017 aa17.63■□□□□ 0.41
PRPF39-204ENST00000553605 INPP5BP32019 993 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 GYG1P46976 350 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 HDLBPQ00341 1268 aaKnown RBP17.62■□□□□ 0.41
PRPF39-204ENST00000553605 MIGA2Q7L4E1 593 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 TSPYL6Q8N831 410 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 STK31Q9BXU1 1019 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 MYH16Q9H6N6 1097 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 TMOD2Q9NZR1 351 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 ADAMTS8Q9UP79 889 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 CHMP3Q9Y3E7 222 aa17.62■□□□□ 0.41
PRPF39-204ENST00000553605 CYP2C8P10632 490 aa17.61■□□□□ 0.41
PRPF39-204ENST00000553605 GRIK5Q16478 980 aa17.61■□□□□ 0.41
PRPF39-204ENST00000553605 LDHAL6AQ6ZMR3 332 aa17.61■□□□□ 0.41
PRPF39-204ENST00000553605 DIS3LQ8TF46 1054 aaKnown RBP17.61■□□□□ 0.41
PRPF39-204ENST00000553605 A0A1B0GUL6 1792 aa17.61■□□□□ 0.41
PRPF39-204ENST00000553605 ALPK3Q96L96 1907 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 SYN1P17600 705 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 MAGEA10P43363 369 aaPredicted RBP17.6■□□□□ 0.41
PRPF39-204ENST00000553605 FOXO4P98177 505 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 IRF5Q13568 498 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 FKBP1CQ5VVH2 108 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 GPAT2Q6NUI2 795 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 G2E3Q7L622 706 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 TEKT1Q969V4 418 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 FAM84BQ96KN1 310 aaPredicted RBP17.6■□□□□ 0.41
PRPF39-204ENST00000553605 CNNM1Q9NRU3 951 aa17.6■□□□□ 0.41
PRPF39-204ENST00000553605 MGAMO43451 1857 aa17.59■□□□□ 0.41
PRPF39-204ENST00000553605 UBE4AQ14139 1066 aa17.59■□□□□ 0.41
PRPF39-204ENST00000553605 ANKLE1Q8NAG6 615 aa17.59■□□□□ 0.41
PRPF39-204ENST00000553605 ZNF594Q96JF6 807 aaPredicted RBP17.59■□□□□ 0.41
PRPF39-204ENST00000553605 UBE2OQ9C0C9 1292 aaKnown RBP17.59■□□□□ 0.41
PRPF39-204ENST00000553605 VCANP13611 3396 aa17.59■□□□□ 0.41
PRPF39-204ENST00000553605 TNPO2O14787 897 aaKnown RBP17.58■□□□□ 0.4
PRPF39-204ENST00000553605 CCDC57Q2TAC2 916 aa17.58■□□□□ 0.4
PRPF39-204ENST00000553605 TAF7LQ5H9L4 462 aa17.58■□□□□ 0.4
PRPF39-204ENST00000553605 LINS1Q8NG48 757 aa17.58■□□□□ 0.4
PRPF39-204ENST00000553605 ZDHHC15Q96MV8 337 aa17.58■□□□□ 0.4
PRPF39-204ENST00000553605 ZNF112Q9UJU3 913 aa17.58■□□□□ 0.4
PRPF39-204ENST00000553605 RPTORQ8N122 1335 aa17.57■□□□□ 0.4
PRPF39-204ENST00000553605 CXCL11O14625 94 aa17.57■□□□□ 0.4
PRPF39-204ENST00000553605 SLC4A2P04920 1241 aa17.57■□□□□ 0.4
PRPF39-204ENST00000553605 APOBEC3HQ6NTF7 200 aaKnown RBP17.57■□□□□ 0.4
PRPF39-204ENST00000553605 MRIQ9BWK5 157 aa17.57■□□□□ 0.4
PRPF39-204ENST00000553605 NBPF3Q9H094 633 aa17.57■□□□□ 0.4
PRPF39-204ENST00000553605 PRDM6Q9NQX0 595 aa17.57■□□□□ 0.4
PRPF39-204ENST00000553605 TAOK2Q9UL54 1235 aa17.57■□□□□ 0.4
PRPF39-204ENST00000553605 LMBR1LQ6UX01 489 aa17.56■□□□□ 0.4
PRPF39-204ENST00000553605 TBC1D22AQ8WUA7 517 aa17.56■□□□□ 0.4
PRPF39-204ENST00000553605 DNAAF4Q8WXU2 420 aa17.56■□□□□ 0.4
PRPF39-204ENST00000553605 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.56■□□□□ 0.4
PRPF39-204ENST00000553605 RPAP1Q9BWH6 1393 aaPredicted RBP17.55■□□□□ 0.4
PRPF39-204ENST00000553605 CHAF1AQ13111 956 aaPredicted RBP17.55■□□□□ 0.4
PRPF39-204ENST00000553605 NOL9Q5SY16 702 aaKnown RBP17.55■□□□□ 0.4
PRPF39-204ENST00000553605 FASTKD5Q7L8L6 764 aaKnown RBP17.55■□□□□ 0.4
PRPF39-204ENST00000553605 VPS37DQ86XT2 251 aa17.55■□□□□ 0.4
PRPF39-204ENST00000553605 IQSEC3Q9UPP2 1182 aaPredicted RBP17.55■□□□□ 0.4
PRPF39-204ENST00000553605 POTEB2H3BUK9 544 aa17.54■□□□□ 0.4
PRPF39-204ENST00000553605 APAF1O14727 1248 aa17.54■□□□□ 0.4
PRPF39-204ENST00000553605 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
PRPF39-204ENST00000553605 FLIIQ13045 1269 aa17.54■□□□□ 0.4
PRPF39-204ENST00000553605 FAM151AQ8WW52 585 aa17.54■□□□□ 0.4
PRPF39-204ENST00000553605 COA7Q96BR5 231 aa17.54■□□□□ 0.4
PRPF39-204ENST00000553605 GUCD1Q96NT3 240 aa17.54■□□□□ 0.4
PRPF39-204ENST00000553605 C11orf49Q9H6J7 331 aa17.54■□□□□ 0.4
PRPF39-204ENST00000553605 MYBBP1AQ9BQG0 1328 aaKnown RBP17.53■□□□□ 0.4
PRPF39-204ENST00000553605 FKBP5Q13451 457 aaPredicted RBP17.53■□□□□ 0.4
PRPF39-204ENST00000553605 FAM109BQ6ICB4 259 aaPredicted RBP17.53■□□□□ 0.4
PRPF39-204ENST00000553605 FBXO33Q7Z6M2 555 aa17.53■□□□□ 0.4
PRPF39-204ENST00000553605 EPHA10Q5JZY3 1008 aa17.52■□□□□ 0.4
PRPF39-204ENST00000553605 HHIPL2Q6UWX4 724 aa17.52■□□□□ 0.4
PRPF39-204ENST00000553605 SMCR8Q8TEV9 937 aaPredicted RBP17.52■□□□□ 0.4
PRPF39-204ENST00000553605 SLC45A1Q9Y2W3 748 aa17.52■□□□□ 0.4
PRPF39-204ENST00000553605 SPTBN5Q9NRC6 3674 aaKnown RBP17.51■□□□□ 0.39
PRPF39-204ENST00000553605 A0A0G2JLL6 359 aaPredicted RBP17.51■□□□□ 0.39
PRPF39-204ENST00000553605 TCP10Q12799 353 aa17.51■□□□□ 0.39
PRPF39-204ENST00000553605 GADL1Q6ZQY3 521 aa17.51■□□□□ 0.39
PRPF39-204ENST00000553605 PRRT2Q7Z6L0 340 aaPredicted RBP17.51■□□□□ 0.39
PRPF39-204ENST00000553605 FAM161BQ96MY7 647 aa17.51■□□□□ 0.39
PRPF39-204ENST00000553605 HMX1Q9NP08 348 aaPredicted RBP17.51■□□□□ 0.39
PRPF39-204ENST00000553605 ZHX2Q9Y6X8 837 aa17.51■□□□□ 0.39
PRPF39-204ENST00000553605 MAST3O60307 1309 aa17.5■□□□□ 0.39
PRPF39-204ENST00000553605 TWISTNBQ3B726 338 aaPredicted RBP17.5■□□□□ 0.39
PRPF39-204ENST00000553605 CAVIN4Q5BKX8 364 aa17.5■□□□□ 0.39
PRPF39-204ENST00000553605 TSR2Q969E8 191 aaKnown RBP17.5■□□□□ 0.39
PRPF39-204ENST00000553605 PUS3Q9BZE2 481 aaKnown RBP17.5■□□□□ 0.39
PRPF39-204ENST00000553605 SUGT1Q9Y2Z0 365 aa17.5■□□□□ 0.39
PRPF39-204ENST00000553605 EYSQ5T1H1 3165 aa17.5■□□□□ 0.39
PRPF39-204ENST00000553605 HMGCRP04035 888 aa17.49■□□□□ 0.39
PRPF39-204ENST00000553605 ANKRD13CQ8N6S4 541 aa17.49■□□□□ 0.39
PRPF39-204ENST00000553605 PICK1Q9NRD5 415 aa17.48■□□□□ 0.39
PRPF39-204ENST00000553605 OGDHLQ9ULD0 1010 aa17.48■□□□□ 0.39
PRPF39-204ENST00000553605 AFG3L2Q9Y4W6 797 aa17.48■□□□□ 0.39
PRPF39-204ENST00000553605 LAMA2P24043 3122 aaKnown RBP17.48■□□□□ 0.39
PRPF39-204ENST00000553605 MROH5Q6ZUA9 1318 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms