RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ATP5JP18859 108 aa27.79■■■□□ 2.04
TDP1-206ENST00000553569 TTLL12Q14166 644 aaPredicted RBP27.79■■■□□ 2.04
TDP1-206ENST00000553569 ANKRD45Q5TZF3 282 aa27.79■■■□□ 2.04
TDP1-206ENST00000553569 NAA16Q6N069 864 aaPredicted RBP27.79■■■□□ 2.04
TDP1-206ENST00000553569 SAPCD2Q86UD0 394 aa27.79■■■□□ 2.04
TDP1-206ENST00000553569 GOLIM4O00461 696 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 IGHDP01880 384 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 LDHCP07864 332 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 HUNKP57058 714 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 DEFB115Q30KQ5 88 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 FAM163AQ96GL9 167 aaPredicted RBP27.78■■■□□ 2.04
TDP1-206ENST00000553569 GPATCH3Q96I76 525 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 TMEM39BQ9GZU3 492 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 ECHDC1Q9NTX5 307 aa27.78■■■□□ 2.04
TDP1-206ENST00000553569 SSC5DA1L4H1 1573 aa27.77■■■□□ 2.04
TDP1-206ENST00000553569 PRKG1Q13976 671 aa27.77■■■□□ 2.04
TDP1-206ENST00000553569 NBPF12Q5TAG4 269 aaPredicted RBP27.77■■■□□ 2.04
TDP1-206ENST00000553569 TSHZ3Q63HK5 1081 aa27.77■■■□□ 2.04
TDP1-206ENST00000553569 MOB2Q70IA6 237 aa27.77■■■□□ 2.04
TDP1-206ENST00000553569 EDC3Q96F86 508 aaKnown RBP27.77■■■□□ 2.04
TDP1-206ENST00000553569 GRM1Q13255 1194 aa27.76■■■□□ 2.03
TDP1-206ENST00000553569 CDAN1Q8IWY9 1227 aa27.76■■■□□ 2.03
TDP1-206ENST00000553569 OTUD7AQ8TE49 926 aaPredicted RBP27.76■■■□□ 2.03
TDP1-206ENST00000553569 GPR75-ASB3A0A0A6YYF3 556 aa27.75■■■□□ 2.03
TDP1-206ENST00000553569 NFIAQ12857 509 aa27.75■■■□□ 2.03
TDP1-206ENST00000553569 TTF1Q15361 905 aaPredicted RBP27.75■■■□□ 2.03
TDP1-206ENST00000553569 FKBP1CQ5VVH2 108 aa27.75■■■□□ 2.03
TDP1-206ENST00000553569 HAUS7Q99871 368 aa27.75■■■□□ 2.03
TDP1-206ENST00000553569 NOL10Q9BSC4 688 aaKnown RBP27.75■■■□□ 2.03
TDP1-206ENST00000553569 CEP350Q5VT06 3117 aa27.75■■■□□ 2.03
TDP1-206ENST00000553569 TCP10Q12799 353 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 MAP3K12Q12852 859 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 SUPT20HL1Q3ZLR7 823 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 B4GALNT3Q6L9W6 998 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 CYP4F22Q6NT55 531 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 FAM83AQ86UY5 434 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 MAGEB6Q8N7X4 407 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 PAG1Q9NWQ8 432 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 FZD1Q9UP38 647 aa27.74■■■□□ 2.03
TDP1-206ENST00000553569 CYP7A1P22680 504 aa27.73■■■□□ 2.03
TDP1-206ENST00000553569 VEGFBP49765 207 aa27.73■■■□□ 2.03
TDP1-206ENST00000553569 FKBP1BP68106 108 aa27.73■■■□□ 2.03
TDP1-206ENST00000553569 ADGRA1Q86SQ6 560 aa27.73■■■□□ 2.03
TDP1-206ENST00000553569 SMC5Q8IY18 1101 aa27.73■■■□□ 2.03
TDP1-206ENST00000553569 TEPSINQ96N21 525 aa27.73■■■□□ 2.03
TDP1-206ENST00000553569 AK9Q5TCS8 1911 aa27.73■■■□□ 2.03
TDP1-206ENST00000553569 CAPNS2Q96L46 248 aa27.72■■■□□ 2.03
TDP1-206ENST00000553569 AATFQ9NY61 560 aaKnown RBP eCLIP27.72■■■□□ 2.03
TDP1-206ENST00000553569 FAM198AQ9UFP1 575 aa27.72■■■□□ 2.03
TDP1-206ENST00000553569 RFX7Q2KHR2 1363 aa27.72■■■□□ 2.03
TDP1-206ENST00000553569 UBE2Q2LH0YL09 131 aa27.71■■■□□ 2.03
TDP1-206ENST00000553569 IGSF3O75054 1194 aa27.71■■■□□ 2.03
TDP1-206ENST00000553569 RHBDL3P58872 404 aa27.71■■■□□ 2.03
TDP1-206ENST00000553569 PICALMQ13492 652 aa27.71■■■□□ 2.03
TDP1-206ENST00000553569 ARMC9Q7Z3E5 817 aa27.71■■■□□ 2.03
TDP1-206ENST00000553569 ANGEL1Q9UNK9 670 aaKnown RBP27.71■■■□□ 2.03
TDP1-206ENST00000553569 RGS3P49796 1198 aa27.7■■■□□ 2.02
TDP1-206ENST00000553569 FAM151AQ8WW52 585 aa27.7■■■□□ 2.02
TDP1-206ENST00000553569 HHIPL1Q96JK4 782 aa27.7■■■□□ 2.02
TDP1-206ENST00000553569 LNPKQ9C0E8 428 aa27.7■■■□□ 2.02
TDP1-206ENST00000553569 RPAP1Q9BWH6 1393 aaPredicted RBP27.7■■■□□ 2.02
TDP1-206ENST00000553569 TTC41PQ6P2S7 1318 aa27.69■■■□□ 2.02
TDP1-206ENST00000553569 WDR33Q9C0J8 1336 aaKnown RBP27.69■■■□□ 2.02
TDP1-206ENST00000553569 MYH7P12883 1935 aa27.69■■■□□ 2.02
TDP1-206ENST00000553569 WDHD1O75717 1129 aaPredicted RBP27.69■■■□□ 2.02
TDP1-206ENST00000553569 BAG3O95817 575 aa27.69■■■□□ 2.02
TDP1-206ENST00000553569 MX1P20591 662 aa27.69■■■□□ 2.02
TDP1-206ENST00000553569 ECE1P42892 770 aa27.69■■■□□ 2.02
TDP1-206ENST00000553569 RGMBQ6NW40 437 aa27.69■■■□□ 2.02
TDP1-206ENST00000553569 SH3RF3Q8TEJ3 882 aaPredicted RBP27.69■■■□□ 2.02
TDP1-206ENST00000553569 IDI2Q9BXS1 227 aa27.69■■■□□ 2.02
TDP1-206ENST00000553569 PPP1R12BO60237 982 aaPredicted RBP27.68■■■□□ 2.02
TDP1-206ENST00000553569 PDE6AP16499 860 aa27.68■■■□□ 2.02
TDP1-206ENST00000553569 SLC9C2Q5TAH2 1124 aa27.68■■■□□ 2.02
TDP1-206ENST00000553569 ZFPM1Q8IX07 1006 aa27.68■■■□□ 2.02
TDP1-206ENST00000553569 TEX11Q8IYF3 940 aa27.68■■■□□ 2.02
TDP1-206ENST00000553569 MIGA1Q8NAN2 632 aa27.68■■■□□ 2.02
TDP1-206ENST00000553569 DDX4Q9NQI0 724 aaKnown RBP27.68■■■□□ 2.02
TDP1-206ENST00000553569 ZNF157P51786 506 aaPredicted RBP27.67■■■□□ 2.02
TDP1-206ENST00000553569 DYNLL1P63167 89 aaKnown RBP27.67■■■□□ 2.02
TDP1-206ENST00000553569 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.67■■■□□ 2.02
TDP1-206ENST00000553569 CDK5RAP2Q96SN8 1893 aa27.67■■■□□ 2.02
TDP1-206ENST00000553569 OTOFQ9HC10 1997 aa27.67■■■□□ 2.02
TDP1-206ENST00000553569 SALL3Q9BXA9 1300 aa27.67■■■□□ 2.02
TDP1-206ENST00000553569 ERC2O15083 957 aa27.66■■■□□ 2.02
TDP1-206ENST00000553569 ENTPD3O75355 529 aa27.66■■■□□ 2.02
TDP1-206ENST00000553569 MAP4K4O95819 1239 aaPredicted RBP27.65■■■□□ 2.02
TDP1-206ENST00000553569 PLCG2P16885 1265 aa27.65■■■□□ 2.02
TDP1-206ENST00000553569 PPP4CP60510 307 aa27.65■■■□□ 2.02
TDP1-206ENST00000553569 CHD1LQ86WJ1 897 aa27.65■■■□□ 2.02
TDP1-206ENST00000553569 PI4K2BQ8TCG2 481 aa27.65■■■□□ 2.02
TDP1-206ENST00000553569 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.65■■■□□ 2.02
TDP1-206ENST00000553569 THSD7BQ9C0I4 1608 aa27.65■■■□□ 2.02
TDP1-206ENST00000553569 ZNF532Q9HCE3 1301 aa27.65■■■□□ 2.02
TDP1-206ENST00000553569 FOCADQ5VW36 1801 aa27.64■■■□□ 2.02
TDP1-206ENST00000553569 AOC2O75106 756 aa27.64■■■□□ 2.02
TDP1-206ENST00000553569 GLRX3O76003 335 aaKnown RBP27.64■■■□□ 2.02
TDP1-206ENST00000553569 IREB2P48200 963 aaKnown RBP27.64■■■□□ 2.02
TDP1-206ENST00000553569 NUCB1Q02818 461 aa27.64■■■□□ 2.02
TDP1-206ENST00000553569 ZSCAN29Q8IWY8 852 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms