RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 BRI3BPQ8WY22 251 aa15.48■□□□□ 0.07
SIX1-202ENST00000553535 ARHGAP45Q92619 1136 aa15.48■□□□□ 0.07
SIX1-202ENST00000553535 MEIS3Q99687 375 aa15.48■□□□□ 0.07
SIX1-202ENST00000553535 COPRSQ9NQ92 184 aa15.48■□□□□ 0.07
SIX1-202ENST00000553535 PA2G4Q9UQ80 394 aaKnown RBP15.48■□□□□ 0.07
SIX1-202ENST00000553535 TRIM17Q9Y577 477 aa15.48■□□□□ 0.07
SIX1-202ENST00000553535 CSADQ9Y600 493 aa15.48■□□□□ 0.07
SIX1-202ENST00000553535 ZBTB22O15209 634 aa15.47■□□□□ 0.07
SIX1-202ENST00000553535 GTF2A2P52657 109 aa15.47■□□□□ 0.07
SIX1-202ENST00000553535 INTS3Q68E01 1043 aaKnown RBP15.47■□□□□ 0.07
SIX1-202ENST00000553535 ERO1AQ96HE7 468 aa15.47■□□□□ 0.07
SIX1-202ENST00000553535 CENPFP49454 3210 aa15.46■□□□□ 0.07
SIX1-202ENST00000553535 SPDYE5A6NIY4 337 aa15.46■□□□□ 0.07
SIX1-202ENST00000553535 FAM151AQ8WW52 585 aa15.46■□□□□ 0.07
SIX1-202ENST00000553535 HOOK2Q96ED9 719 aa15.46■□□□□ 0.07
SIX1-202ENST00000553535 GNL3LQ9NVN8 582 aaKnown RBP15.46■□□□□ 0.07
SIX1-202ENST00000553535 DAGLAQ9Y4D2 1042 aa15.46■□□□□ 0.07
SIX1-202ENST00000553535 SNCAIPQ9Y6H5 919 aa15.46■□□□□ 0.07
SIX1-202ENST00000553535 KIAA0100Q14667 2235 aaKnown RBP15.46■□□□□ 0.06
SIX1-202ENST00000553535 RPAP1Q9BWH6 1393 aaPredicted RBP15.46■□□□□ 0.06
SIX1-202ENST00000553535 SALL1Q9NSC2 1324 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 CCL15-CCL14A0A0B4J2E2 113 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 SEMA3EO15041 775 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 PRDX5P30044 214 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 PHKA1P46020 1223 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 CAP1Q01518 475 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 SP3Q02447 781 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 DIXDC1Q155Q3 683 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 CCL15Q16663 113 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 CDC42EP5Q6NZY7 148 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 ERO1BQ86YB8 467 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 CD99L2Q8TCZ2 262 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 ZKSCAN4Q969J2 545 aaPredicted RBP15.45■□□□□ 0.06
SIX1-202ENST00000553535 OTUD5Q96G74 571 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 WRNIP1Q96S55 665 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 AK9Q5TCS8 1911 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 FAM43AQ8N2R8 423 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 DENND2AQ9ULE3 1009 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 PTPN22Q9Y2R2 807 aa15.45■□□□□ 0.06
SIX1-202ENST00000553535 LDHBP07195 334 aaKnown RBP15.44■□□□□ 0.06
SIX1-202ENST00000553535 ADORA1P30542 326 aa15.44■□□□□ 0.06
SIX1-202ENST00000553535 DCAF15Q66K64 600 aa15.44■□□□□ 0.06
SIX1-202ENST00000553535 MIGA2Q7L4E1 593 aa15.44■□□□□ 0.06
SIX1-202ENST00000553535 ZNF341Q9BYN7 854 aa15.44■□□□□ 0.06
SIX1-202ENST00000553535 EFCC1Q9HA90 598 aa15.44■□□□□ 0.06
SIX1-202ENST00000553535 ZFYVE28Q9HCC9 887 aa15.44■□□□□ 0.06
SIX1-202ENST00000553535 IRF6O14896 467 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 GNAI3P08754 354 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 TIMM10P62072 90 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 NFIAQ12857 509 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 MTX1Q13505 466 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 TAF1CQ15572 869 aaPredicted RBP15.43■□□□□ 0.06
SIX1-202ENST00000553535 CCDC102BQ68D86 513 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 FAM198AQ9UFP1 575 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 ZNF112Q9UJU3 913 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 MYH2Q9UKX2 1941 aa15.43■□□□□ 0.06
SIX1-202ENST00000553535 CETPP11597 493 aa15.42■□□□□ 0.06
SIX1-202ENST00000553535 TCP10Q12799 353 aa15.42■□□□□ 0.06
SIX1-202ENST00000553535 PPIL2Q13356 520 aa15.42■□□□□ 0.06
SIX1-202ENST00000553535 USP40Q9NVE5 1235 aa15.42■□□□□ 0.06
SIX1-202ENST00000553535 SRGAP3O43295 1099 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 SLC34A2O95436 690 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 INPP5BP32019 993 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 PPATQ06203 517 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 SNAPC2Q13487 334 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 ZCCHC17Q9NP64 241 aaKnown RBP15.41■□□□□ 0.06
SIX1-202ENST00000553535 BTBD19C9JJ37 291 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 IPO8O15397 1037 aaKnown RBP15.41■□□□□ 0.06
SIX1-202ENST00000553535 TRIM27P14373 513 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 TFCP2Q12800 502 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 RASGRF1Q13972 1273 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 ZFPM1Q8IX07 1006 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 ZGPATQ8N5A5 531 aaKnown RBP15.41■□□□□ 0.06
SIX1-202ENST00000553535 TNNQ9UQP3 1299 aa15.41■□□□□ 0.06
SIX1-202ENST00000553535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.41■□□□□ 0.06
SIX1-202ENST00000553535 MKI67P46013 3256 aaKnown RBP15.4■□□□□ 0.06
SIX1-202ENST00000553535 GAKO14976 1311 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 PDS5AQ29RF7 1337 aaKnown RBP15.4■□□□□ 0.06
SIX1-202ENST00000553535 A0A1B0GUL7 405 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 TLR2O60603 784 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 BCAR3O75815 825 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 ARMC5Q96C12 935 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 FAM163AQ96GL9 167 aaPredicted RBP15.4■□□□□ 0.06
SIX1-202ENST00000553535 XAGE2Q96GT9 111 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 IDI2Q9BXS1 227 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 AKAP2Q9Y2D5 859 aa15.4■□□□□ 0.06
SIX1-202ENST00000553535 ARHGEF6Q15052 776 aa15.39■□□□□ 0.05
SIX1-202ENST00000553535 ATF7IPQ6VMQ6 1270 aa15.39■□□□□ 0.05
SIX1-202ENST00000553535 POTEFA5A3E0 1075 aa15.38■□□□□ 0.05
SIX1-202ENST00000553535 ENTPD3O75355 529 aa15.38■□□□□ 0.05
SIX1-202ENST00000553535 WDHD1O75717 1129 aaPredicted RBP15.38■□□□□ 0.05
SIX1-202ENST00000553535 PRKAR2AP13861 404 aaKnown RBP15.38■□□□□ 0.05
SIX1-202ENST00000553535 NOL9Q5SY16 702 aaKnown RBP15.38■□□□□ 0.05
SIX1-202ENST00000553535 KCNH4Q9UQ05 1017 aa15.38■□□□□ 0.05
SIX1-202ENST00000553535 BRCA2P51587 3418 aa15.38■□□□□ 0.05
SIX1-202ENST00000553535 ATRNL1Q5VV63 1379 aa15.37■□□□□ 0.05
SIX1-202ENST00000553535 GNAI2P04899 355 aa15.37■□□□□ 0.05
SIX1-202ENST00000553535 RGS3P49796 1198 aa15.37■□□□□ 0.05
SIX1-202ENST00000553535 MAP3K10Q02779 954 aa15.37■□□□□ 0.05
SIX1-202ENST00000553535 MVPQ14764 893 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms