RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 POLR3EQ9NVU0 708 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 TSPYL4Q9UJ04 414 aa9.57□□□□□ -0.88
ATXN3-219ENST00000553488 SPEF2Q9C093 1822 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 ZBTB24O43167 697 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 EIF2S2P20042 333 aaKnown RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 RPS12P25398 132 aaKnown RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 KIF23Q02241 960 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 TCIRG1Q13488 830 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 CSPP1Q1MSJ5 1256 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 TBC1D10BQ4KMP7 808 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 RTL5Q5HYW3 569 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 COPS6Q7L5N1 327 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 XAGE3Q8WTP9 111 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 CELF1Q92879 486 aaKnown RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 RNF186Q9NXI6 227 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 POLLQ9UGP5 575 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 TRMT112Q9UI30 125 aaKnown RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 MYH3P11055 1940 aa9.56□□□□□ -0.88
ATXN3-219ENST00000553488 ASTN2O75129 1339 aaPredicted RBP9.56□□□□□ -0.88
ATXN3-219ENST00000553488 ECE2O60344 883 aa9.55□□□□□ -0.88
ATXN3-219ENST00000553488 NEFMP07197 916 aa9.55□□□□□ -0.88
ATXN3-219ENST00000553488 SF3B3Q15393 1217 aaKnown RBP9.55□□□□□ -0.88
ATXN3-219ENST00000553488 KCNQ5Q9NR82 932 aa9.55□□□□□ -0.88
ATXN3-219ENST00000553488 BABAM1Q9NWV8 329 aa9.55□□□□□ -0.88
ATXN3-219ENST00000553488 GGA3Q9NZ52 723 aa9.55□□□□□ -0.88
ATXN3-219ENST00000553488 RBBP6Q7Z6E9 1792 aaKnown RBP9.55□□□□□ -0.88
ATXN3-219ENST00000553488 MAPK8IP3Q9UPT6 1336 aa9.55□□□□□ -0.88
ATXN3-219ENST00000553488 TRPA1O75762 1119 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 F12P00748 615 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-219ENST00000553488 ZNF157P51786 506 aaPredicted RBP9.54□□□□□ -0.88
ATXN3-219ENST00000553488 GPSM2P81274 684 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 SKOR1P84550 965 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 KCNH2Q12809 1159 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 NEUROD2Q15784 382 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 WASHC4Q2M389 1173 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 KIF4BQ2VIQ3 1234 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 PPP2R2DQ66LE6 453 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 RASAL3Q86YV0 1011 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 C2orf69Q8N8R5 385 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 CSRNP1Q96S65 589 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 ISCA1Q9BUE6 129 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 GOPCQ9HD26 462 aa9.54□□□□□ -0.88
ATXN3-219ENST00000553488 KIAA0100Q14667 2235 aaKnown RBP9.54□□□□□ -0.88
ATXN3-219ENST00000553488 WNT7AO00755 349 aa9.53□□□□□ -0.88
ATXN3-219ENST00000553488 AIMP1Q12904 312 aaKnown RBP9.53□□□□□ -0.88
ATXN3-219ENST00000553488 KRT24Q2M2I5 525 aa9.53□□□□□ -0.88
ATXN3-219ENST00000553488 CTU1Q7Z7A3 348 aaKnown RBP9.53□□□□□ -0.88
ATXN3-219ENST00000553488 PROCA1Q8NCQ7 364 aaPredicted RBP9.53□□□□□ -0.88
ATXN3-219ENST00000553488 TBC1D16Q8TBP0 767 aa9.53□□□□□ -0.88
ATXN3-219ENST00000553488 ZNF428Q96B54 188 aa9.53□□□□□ -0.88
ATXN3-219ENST00000553488 DCPSQ96C86 337 aaKnown RBP9.53□□□□□ -0.88
ATXN3-219ENST00000553488 CDCA5Q96FF9 252 aa9.53□□□□□ -0.88
ATXN3-219ENST00000553488 TOR4AQ9NXH8 423 aa9.53□□□□□ -0.88
ATXN3-219ENST00000553488 NSFL1CQ9UNZ2 370 aaKnown RBP9.53□□□□□ -0.88
ATXN3-219ENST00000553488 ECM29Q5VYK3 1845 aa9.52□□□□□ -0.89
ATXN3-219ENST00000553488 TNFRSF10AO00220 468 aa9.52□□□□□ -0.89
ATXN3-219ENST00000553488 VIL1P09327 827 aaKnown RBP9.52□□□□□ -0.89
ATXN3-219ENST00000553488 WNT7BP56706 349 aa9.52□□□□□ -0.89
ATXN3-219ENST00000553488 ZNF280AP59817 542 aaPredicted RBP9.52□□□□□ -0.89
ATXN3-219ENST00000553488 FAM89AQ96GI7 184 aa9.52□□□□□ -0.89
ATXN3-219ENST00000553488 PODXL2Q9NZ53 605 aa9.52□□□□□ -0.89
ATXN3-219ENST00000553488 CHPF2Q9P2E5 772 aa9.52□□□□□ -0.89
ATXN3-219ENST00000553488 A0A1B0GUL6 1792 aa9.51□□□□□ -0.89
ATXN3-219ENST00000553488 RIPK4P57078 832 aa9.51□□□□□ -0.89
ATXN3-219ENST00000553488 Q6ZNB5 142 aa9.51□□□□□ -0.89
ATXN3-219ENST00000553488 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
ATXN3-219ENST00000553488 GMLQ99445 158 aa9.51□□□□□ -0.89
ATXN3-219ENST00000553488 EYA3Q99504 573 aa9.51□□□□□ -0.89
ATXN3-219ENST00000553488 UNC93B1Q9H1C4 597 aa9.51□□□□□ -0.89
ATXN3-219ENST00000553488 CHL1O00533 1208 aa9.5□□□□□ -0.89
ATXN3-219ENST00000553488 TMPOP42166 694 aaKnown RBP9.5□□□□□ -0.89
ATXN3-219ENST00000553488 FKBP1BP68106 108 aa9.5□□□□□ -0.89
ATXN3-219ENST00000553488 ANGEL2Q5VTE6 544 aaKnown RBP9.5□□□□□ -0.89
ATXN3-219ENST00000553488 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
ATXN3-219ENST00000553488 CEP290O15078 2479 aa9.5□□□□□ -0.89
ATXN3-219ENST00000553488 PITPNM2Q9BZ72 1349 aa9.5□□□□□ -0.89
ATXN3-219ENST00000553488 SZT2Q5T011 3432 aa9.5□□□□□ -0.89
ATXN3-219ENST00000553488 ATP5J2-PTCD1G3V325 749 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 IRS4O14654 1257 aaPredicted RBP9.49□□□□□ -0.89
ATXN3-219ENST00000553488 UFL1O94874 794 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 HOXB7P09629 217 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 RPS8P62241 208 aaKnown RBP9.49□□□□□ -0.89
ATXN3-219ENST00000553488 LMOD3Q0VAK6 560 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 FOXC1Q12948 553 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 TRIM28Q13263 835 aaKnown RBP9.49□□□□□ -0.89
ATXN3-219ENST00000553488 SCARF1Q14162 830 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 HDGFL1Q5TGJ6 251 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 MOB2Q70IA6 237 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 AGBL3Q8NEM8 1001 aa9.49□□□□□ -0.89
ATXN3-219ENST00000553488 OTOFQ9HC10 1997 aa9.48□□□□□ -0.89
ATXN3-219ENST00000553488 RANBP2P49792 3224 aaKnown RBP9.48□□□□□ -0.89
ATXN3-219ENST00000553488 SH3BP2P78314 561 aa9.48□□□□□ -0.89
ATXN3-219ENST00000553488 NOM1Q5C9Z4 860 aaKnown RBP9.48□□□□□ -0.89
ATXN3-219ENST00000553488 ZNF296Q8WUU4 475 aaPredicted RBP9.48□□□□□ -0.89
ATXN3-219ENST00000553488 ZC3H12CQ9C0D7 883 aaKnown RBP9.48□□□□□ -0.89
ATXN3-219ENST00000553488 MYOZ2Q9NPC6 264 aa9.48□□□□□ -0.89
ATXN3-219ENST00000553488 SEC31BQ9NQW1 1179 aa9.48□□□□□ -0.89
ATXN3-219ENST00000553488 DGAT1O75907 488 aa9.47□□□□□ -0.89
ATXN3-219ENST00000553488 PKN2Q16513 984 aaKnown RBP9.47□□□□□ -0.89
ATXN3-219ENST00000553488 TRAF7Q6Q0C0 670 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms