RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 TEPSINQ96N21 525 aa22.53■■□□□ 1.2
CPSF2-202ENST00000553427 RAI14Q9P0K7 980 aa22.53■■□□□ 1.2
CPSF2-202ENST00000553427 GPR75-ASB3A0A0A6YYF3 556 aa22.52■■□□□ 1.2
CPSF2-202ENST00000553427 TCP10L2B9ZVM9 353 aa22.52■■□□□ 1.2
CPSF2-202ENST00000553427 EXOC6Q8TAG9 804 aa22.52■■□□□ 1.2
CPSF2-202ENST00000553427 CAPNS2Q96L46 248 aa22.52■■□□□ 1.2
CPSF2-202ENST00000553427 ATP5JP18859 108 aa22.51■■□□□ 1.19
CPSF2-202ENST00000553427 MAP3K11Q16584 847 aa22.51■■□□□ 1.19
CPSF2-202ENST00000553427 PIH1D3Q9NQM4 214 aaKnown RBP22.51■■□□□ 1.19
CPSF2-202ENST00000553427 WDR33Q9C0J8 1336 aaKnown RBP22.51■■□□□ 1.19
CPSF2-202ENST00000553427 PCNTO95613 3336 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 SMARCA5O60264 1052 aaPredicted RBP22.5■■□□□ 1.19
CPSF2-202ENST00000553427 BTDP43251 543 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 CACNB3P54284 484 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 RGMBQ6NW40 437 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 ARMC9Q7Z3E5 817 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 GCC1Q96CN9 775 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 IDI2Q9BXS1 227 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 USP40Q9NVE5 1235 aa22.5■■□□□ 1.19
CPSF2-202ENST00000553427 UNCXA6NJT0 531 aa22.49■■□□□ 1.19
CPSF2-202ENST00000553427 TTF1Q15361 905 aaPredicted RBP22.49■■□□□ 1.19
CPSF2-202ENST00000553427 NBPF12Q5TAG4 269 aaPredicted RBP22.49■■□□□ 1.19
CPSF2-202ENST00000553427 NAA16Q6N069 864 aaPredicted RBP22.49■■□□□ 1.19
CPSF2-202ENST00000553427 CYP4F22Q6NT55 531 aa22.49■■□□□ 1.19
CPSF2-202ENST00000553427 FAM151AQ8WW52 585 aa22.49■■□□□ 1.19
CPSF2-202ENST00000553427 TMEM39BQ9GZU3 492 aa22.49■■□□□ 1.19
CPSF2-202ENST00000553427 DOCK2Q92608 1830 aa22.49■■□□□ 1.19
CPSF2-202ENST00000553427 PPP1R12BO60237 982 aaPredicted RBP22.48■■□□□ 1.19
CPSF2-202ENST00000553427 NPM3O75607 178 aaKnown RBP22.48■■□□□ 1.19
CPSF2-202ENST00000553427 RHBDL3P58872 404 aa22.48■■□□□ 1.19
CPSF2-202ENST00000553427 CCDC102AQ96A19 550 aa22.48■■□□□ 1.19
CPSF2-202ENST00000553427 ENTPD3O75355 529 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 MAP2K2P36507 400 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 NFIAQ12857 509 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 TTLL12Q14166 644 aaPredicted RBP22.47■■□□□ 1.19
CPSF2-202ENST00000553427 LDLRAD1Q5T700 205 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 PAXIP1Q6ZW49 1069 aaPredicted RBP22.47■■□□□ 1.19
CPSF2-202ENST00000553427 HOOK2Q96ED9 719 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 GPATCH3Q96I76 525 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 HAUS7Q99871 368 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 ECHDC1Q9NTX5 307 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 FAM198AQ9UFP1 575 aa22.47■■□□□ 1.19
CPSF2-202ENST00000553427 UBE2Q2LH0YL09 131 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 WDHD1O75717 1129 aaPredicted RBP22.46■■□□□ 1.19
CPSF2-202ENST00000553427 PPP4CP60510 307 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 MAP3K12Q12852 859 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 NOGQ13253 232 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 MOB2Q70IA6 237 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 CDAN1Q8IWY9 1227 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 ANTXR1Q9H6X2 564 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 NDUFB9Q9Y6M9 179 aa22.46■■□□□ 1.19
CPSF2-202ENST00000553427 FAM155AB1AL88 458 aaPredicted RBP22.45■■□□□ 1.18
CPSF2-202ENST00000553427 IDH1O75874 414 aaKnown RBP22.45■■□□□ 1.18
CPSF2-202ENST00000553427 SLC10A3P09131 477 aa22.45■■□□□ 1.18
CPSF2-202ENST00000553427 PLCG2P16885 1265 aa22.45■■□□□ 1.18
CPSF2-202ENST00000553427 ZNF157P51786 506 aaPredicted RBP22.45■■□□□ 1.18
CPSF2-202ENST00000553427 CERS3Q8IU89 383 aa22.45■■□□□ 1.18
CPSF2-202ENST00000553427 RWDD1Q9H446 243 aaPredicted RBP22.45■■□□□ 1.18
CPSF2-202ENST00000553427 ANGEL1Q9UNK9 670 aaKnown RBP22.45■■□□□ 1.18
CPSF2-202ENST00000553427 BAG3O95817 575 aa22.44■■□□□ 1.18
CPSF2-202ENST00000553427 COL2A1P02458 1487 aaPredicted RBP22.44■■□□□ 1.18
CPSF2-202ENST00000553427 RASAL3Q86YV0 1011 aa22.44■■□□□ 1.18
CPSF2-202ENST00000553427 SMC5Q8IY18 1101 aa22.44■■□□□ 1.18
CPSF2-202ENST00000553427 NOL10Q9BSC4 688 aaKnown RBP22.44■■□□□ 1.18
CPSF2-202ENST00000553427 MYO5AQ9Y4I1 1855 aaKnown RBP22.43■■□□□ 1.18
CPSF2-202ENST00000553427 TTC41PQ6P2S7 1318 aa22.43■■□□□ 1.18
CPSF2-202ENST00000553427 GOLIM4O00461 696 aa22.43■■□□□ 1.18
CPSF2-202ENST00000553427 IREB2P48200 963 aaKnown RBP22.43■■□□□ 1.18
CPSF2-202ENST00000553427 RGS3P49796 1198 aa22.43■■□□□ 1.18
CPSF2-202ENST00000553427 ADGRA1Q86SQ6 560 aa22.43■■□□□ 1.18
CPSF2-202ENST00000553427 DNAJC2Q99543 621 aaKnown RBP22.43■■□□□ 1.18
CPSF2-202ENST00000553427 BCL11AQ9H165 835 aa22.43■■□□□ 1.18
CPSF2-202ENST00000553427 BOLA2Q9H3K6 86 aa22.43■■□□□ 1.18
CPSF2-202ENST00000553427 PAG1Q9NWQ8 432 aa22.43■■□□□ 1.18
CPSF2-202ENST00000553427 ATRNL1Q5VV63 1379 aa22.42■■□□□ 1.18
CPSF2-202ENST00000553427 USP2O75604 605 aaPredicted RBP22.42■■□□□ 1.18
CPSF2-202ENST00000553427 CYP7A1P22680 504 aa22.42■■□□□ 1.18
CPSF2-202ENST00000553427 TCP10Q12799 353 aa22.42■■□□□ 1.18
CPSF2-202ENST00000553427 PRKG1Q13976 671 aa22.42■■□□□ 1.18
CPSF2-202ENST00000553427 SALL3Q9BXA9 1300 aa22.41■■□□□ 1.18
CPSF2-202ENST00000553427 MAP2K1Q02750 393 aaPredicted RBP22.41■■□□□ 1.18
CPSF2-202ENST00000553427 DCAF15Q66K64 600 aa22.41■■□□□ 1.18
CPSF2-202ENST00000553427 MAGEB6Q8N7X4 407 aa22.41■■□□□ 1.18
CPSF2-202ENST00000553427 DDX4Q9NQI0 724 aaKnown RBP22.41■■□□□ 1.18
CPSF2-202ENST00000553427 AOC2O75106 756 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 PDE6AP16499 860 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 GRM1Q13255 1194 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 ANKRD45Q5TZF3 282 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 TEX11Q8IYF3 940 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 ANKRD13AQ8IZ07 590 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.4■■□□□ 1.18
CPSF2-202ENST00000553427 WBP1LQ9NX94 342 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 AATFQ9NY61 560 aaKnown RBP eCLIP22.4■■□□□ 1.18
CPSF2-202ENST00000553427 ZBTB47Q9UFB7 747 aaPredicted RBP22.4■■□□□ 1.18
CPSF2-202ENST00000553427 FZD1Q9UP38 647 aa22.4■■□□□ 1.18
CPSF2-202ENST00000553427 ZFPM1Q8IX07 1006 aa22.39■■□□□ 1.17
CPSF2-202ENST00000553427 SH3RF3Q8TEJ3 882 aaPredicted RBP22.39■■□□□ 1.17
CPSF2-202ENST00000553427 EDC3Q96F86 508 aaKnown RBP22.39■■□□□ 1.17
CPSF2-202ENST00000553427 OTOFQ9HC10 1997 aa22.38■■□□□ 1.17
CPSF2-202ENST00000553427 TCRBV5S4A2TA0A5A2 114 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms