RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 RPAP1Q9BWH6 1393 aaPredicted RBP15.97■□□□□ 0.15
ACTN1-207ENST00000553290 MYH2Q9UKX2 1941 aa15.96■□□□□ 0.15
ACTN1-207ENST00000553290 LAMB1P07942 1786 aa15.96■□□□□ 0.15
ACTN1-207ENST00000553290 SURF6O75683 361 aaKnown RBP15.96■□□□□ 0.15
ACTN1-207ENST00000553290 ALDH1A1P00352 501 aa15.96■□□□□ 0.15
ACTN1-207ENST00000553290 ARID4AP29374 1257 aaPredicted RBP15.96■□□□□ 0.15
ACTN1-207ENST00000553290 MAP3K9P80192 1104 aa15.96■□□□□ 0.15
ACTN1-207ENST00000553290 DZIP1Q86YF9 867 aaKnown RBP15.96■□□□□ 0.15
ACTN1-207ENST00000553290 FAM151AQ8WW52 585 aa15.96■□□□□ 0.15
ACTN1-207ENST00000553290 NOP58Q9Y2X3 529 aaKnown RBP15.96■□□□□ 0.15
ACTN1-207ENST00000553290 OTOFQ9HC10 1997 aa15.96■□□□□ 0.15
ACTN1-207ENST00000553290 UQCRFS1P1P0C7P4 283 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 DGKZQ13574 1117 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 DCAF15Q66K64 600 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-207ENST00000553290 ERICH6Q7L0X2 663 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 SPATA5Q8NB90 893 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.95■□□□□ 0.14
ACTN1-207ENST00000553290 FAM163AQ96GL9 167 aaPredicted RBP15.95■□□□□ 0.14
ACTN1-207ENST00000553290 CFHR5Q9BXR6 569 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 ELP3Q9H9T3 547 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 USP40Q9NVE5 1235 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 HMG20BQ9P0W2 317 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 CSADQ9Y600 493 aa15.95■□□□□ 0.14
ACTN1-207ENST00000553290 GAKO14976 1311 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 TBC1D8O95759 1140 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 TNNI3KQ59H18 835 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 NOM1Q5C9Z4 860 aaKnown RBP15.94■□□□□ 0.14
ACTN1-207ENST00000553290 CEP85Q6P2H3 762 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 IFNL1Q8IU54 200 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 MCOLN1Q9GZU1 580 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 RCAN3Q9UKA8 241 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 FPGT-TNNI3KV9GXZ4 949 aa15.94■□□□□ 0.14
ACTN1-207ENST00000553290 GJA5P36382 358 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 TCP10Q12799 353 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 VGLL4Q14135 290 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 CCDC158Q5M9N0 1113 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 OTUD7BQ6GQQ9 843 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 OPTNQ96CV9 577 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 DDX19BQ9UMR2 479 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 AK9Q5TCS8 1911 aa15.93■□□□□ 0.14
ACTN1-207ENST00000553290 LDHCP07864 332 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 MCAMP43121 646 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 GSTO1P78417 241 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 MECOMQ03112 1051 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 NFIAQ12857 509 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 TTC39AQ5SRH9 613 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 WRNIP1Q96S55 665 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 IDI2Q9BXS1 227 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 ZNF341Q9BYN7 854 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 CHMP4BQ9H444 224 aaKnown RBP15.92■□□□□ 0.14
ACTN1-207ENST00000553290 FAM198AQ9UFP1 575 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 MROH7-TTC4A0A0A0MT08 1334 aa15.92■□□□□ 0.14
ACTN1-207ENST00000553290 TESPA1A2RU30 521 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-207ENST00000553290 GPR25O00155 361 aa15.91■□□□□ 0.14
ACTN1-207ENST00000553290 ENTPD3O75355 529 aa15.91■□□□□ 0.14
ACTN1-207ENST00000553290 PI16Q6UXB8 463 aa15.91■□□□□ 0.14
ACTN1-207ENST00000553290 CTU1Q7Z7A3 348 aaKnown RBP15.91■□□□□ 0.14
ACTN1-207ENST00000553290 ZNF296Q8WUU4 475 aaPredicted RBP15.91■□□□□ 0.14
ACTN1-207ENST00000553290 DBNDD2Q9BQY9 259 aa15.91■□□□□ 0.14
ACTN1-207ENST00000553290 GPR75-ASB3A0A0A6YYF3 556 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 SPDYE5A6NIY4 337 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 IGF2BP3O00425 579 aaKnown RBP eCLIP15.9■□□□□ 0.14
ACTN1-207ENST00000553290 MAP4K4O95819 1239 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-207ENST00000553290 BTDP43251 543 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 RGS3P49796 1198 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 GTF2A2P52657 109 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 TBC1D9Q6ZT07 1266 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 MIGA2Q7L4E1 593 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 ERO1BQ86YB8 467 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 ERC1Q8IUD2 1116 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 RPAP2Q8IXW5 612 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-207ENST00000553290 NSUN4Q96CB9 384 aaKnown RBP15.9■□□□□ 0.14
ACTN1-207ENST00000553290 MS4A4AQ96JQ5 239 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 ZNF512BQ96KM6 892 aaPredicted RBP15.9■□□□□ 0.14
ACTN1-207ENST00000553290 RAI14Q9P0K7 980 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 LRP2BPQ9P2M1 347 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 SNCAIPQ9Y6H5 919 aa15.9■□□□□ 0.14
ACTN1-207ENST00000553290 IGSF3O75054 1194 aa15.89■□□□□ 0.13
ACTN1-207ENST00000553290 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-207ENST00000553290 CNKSR2Q8WXI2 1034 aa15.89■□□□□ 0.13
ACTN1-207ENST00000553290 ZKSCAN4Q969J2 545 aaPredicted RBP15.89■□□□□ 0.13
ACTN1-207ENST00000553290 OTUD5Q96G74 571 aa15.89■□□□□ 0.13
ACTN1-207ENST00000553290 ZNF112Q9UJU3 913 aa15.89■□□□□ 0.13
ACTN1-207ENST00000553290 COG6Q9Y2V7 657 aa15.89■□□□□ 0.13
ACTN1-207ENST00000553290 RFX7Q2KHR2 1363 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 CCDC85CA6NKD9 419 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 FKTNO75072 461 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 HMMRO75330 724 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 PKN2Q16513 984 aaKnown RBP15.88■□□□□ 0.13
ACTN1-207ENST00000553290 ZNF384Q8TF68 577 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 PTPN18Q99952 460 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 R3HDMLQ9H3Y0 253 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 ZBTB40Q9NUA8 1239 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 DBNLQ9UJU6 430 aaKnown RBP15.88■□□□□ 0.13
ACTN1-207ENST00000553290 EXOC6BQ9Y2D4 811 aa15.88■□□□□ 0.13
ACTN1-207ENST00000553290 CCL15-CCL14A0A0B4J2E2 113 aa15.87■□□□□ 0.13
ACTN1-207ENST00000553290 NPM3O75607 178 aaKnown RBP15.87■□□□□ 0.13
ACTN1-207ENST00000553290 WDHD1O75717 1129 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms