RNA–Protein interactions for RNA: ENST00000553171.1

PFDN5-219, Transcript of prefoldin subunit 5, humanhuman

TSL 1 (best)

Gene PFDN5, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-219ENST00000553171 TAX1BP1Q86VP1 789 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 NT5DC4Q86YG4 428 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 MIGA1Q8NAN2 632 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 GOLGA1Q92805 767 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 TMEM106CQ9BVX2 250 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 IQCGQ9H095 443 aaKnown RBP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 RMI1Q9H9A7 625 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 CALCOCO1Q9P1Z2 691 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 HDAC9Q9UKV0 1011 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 ZNF652Q9Y2D9 606 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 TRPM7Q96QT4 1865 aa5.79□□□□□ -1.48
PFDN5-219ENST00000553171 POLR3AO14802 1390 aaPredicted RBP5.79□□□□□ -1.48
PFDN5-219ENST00000553171 BDP1A6H8Y1 2624 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 RNF123Q5XPI4 1314 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 PPLO60437 1756 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 RBBP6Q7Z6E9 1792 aaKnown RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 TRIM64CA6NLI5 447 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 TRAF5O00463 557 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 NPHP1O15259 732 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 ATG7O95352 703 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 C4AP0C0L4 1744 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 TGFB3P10600 412 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 HSPA5P11021 654 aaKnown RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 NAT2P11245 290 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 COL6A1P12109 1028 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 CLK1P49759 484 aaKnown RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 ZNF132P52740 706 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 WASHC5Q12768 1159 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 SAFB2Q14151 953 aaKnown RBP eCLIP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 MCM6Q14566 821 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 MAPRE1Q15691 268 aaKnown RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 ZSCAN26Q16670 478 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 JAKMIP3Q5VZ66 844 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 IQCEQ6IPM2 695 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 NFXL1Q6ZNB6 911 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 SMG6Q86US8 1419 aaKnown RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 ARHGEF25Q86VW2 580 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 IFNL1Q8IU54 200 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 FAM184AQ8NB25 1140 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 SVIPQ8NHG7 77 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 DDX54Q8TDD1 881 aaKnown RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 SMARCC1Q92922 1105 aaPredicted RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 RUNDC1Q96C34 613 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 PRAM1Q96QH2 718 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 MUC3BQ9H195 1237 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 DEF6Q9H4E7 631 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 KLF15Q9UIH9 416 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 IQSEC3Q9UPP2 1182 aaPredicted RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 CHMP3Q9Y3E7 222 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 IKBKGQ9Y6K9 419 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 ROCK2O75116 1388 aaKnown RBP5.78□□□□□ -1.48
PFDN5-219ENST00000553171 PAPPA2Q9BXP8 1791 aa5.78□□□□□ -1.48
PFDN5-219ENST00000553171 ATRXP46100 2492 aa5.77□□□□□ -1.48
PFDN5-219ENST00000553171 ADGRF5Q8IZF2 1346 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 RPTORQ8N122 1335 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 FAM155AB1AL88 458 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 DYNC1I1O14576 645 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 PRC1O43663 620 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 PPFIA3O75145 1194 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 LDHCP07864 332 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 PDE4DQ08499 809 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 BMS1Q14692 1282 aaKnown RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 PLEKHG6Q3KR16 790 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 TTC30AQ86WT1 665 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 SLF2Q8IX21 1173 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 MYO1HQ8N1T3 1032 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 SYNE4Q8N205 404 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 CHCHD4Q8N4Q1 142 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 TTLL6Q8N841 843 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 TDRD7Q8NHU6 1098 aaKnown RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 ZNF296Q8WUU4 475 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 FRAT1Q92837 279 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 IL17RAQ96F46 866 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 MPP4Q96JB8 637 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 ZNF512BQ96KM6 892 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 IWS1Q96ST2 819 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 KIF2CQ99661 725 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 MMTAG2Q9BU76 263 aaKnown RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 RWDD1Q9H446 243 aaPredicted RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 OCEL1Q9H607 264 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 CWC15Q9P013 229 aaKnown RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 PRR12Q9ULL5 1215 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 DIS3Q9Y2L1 958 aaKnown RBP5.77□□□□□ -1.49
PFDN5-219ENST00000553171 HCN4Q9Y3Q4 1203 aa5.77□□□□□ -1.49
PFDN5-219ENST00000553171 LTBP3Q9NS15 1303 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 SHTN1A0MZ66 631 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 WASLO00401 505 aaPredicted RBP5.76□□□□□ -1.49
PFDN5-219ENST00000553171 VAMP4O75379 141 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 GYS1P13807 737 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 VCAM1P19320 739 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 STIP1P31948 543 aaKnown RBP5.76□□□□□ -1.49
PFDN5-219ENST00000553171 MRE11P49959 708 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 SESN3P58005 492 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 KIF23Q02241 960 aaPredicted RBP5.76□□□□□ -1.49
PFDN5-219ENST00000553171 TRAF1Q13077 416 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 DHX8Q14562 1220 aaKnown RBP5.76□□□□□ -1.49
PFDN5-219ENST00000553171 NOM1Q5C9Z4 860 aaKnown RBP5.76□□□□□ -1.49
PFDN5-219ENST00000553171 CCDC91Q7Z6B0 441 aa5.76□□□□□ -1.49
PFDN5-219ENST00000553171 FMNL3Q8IVF7 1028 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms