RNA–Protein interactions for RNA: ENST00000553128.5

VPS29-211, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-211ENST00000553128 UBE4AQ14139 1066 aa16.43■□□□□ 0.22
VPS29-211ENST00000553128 CCDC57Q2TAC2 916 aa16.43■□□□□ 0.22
VPS29-211ENST00000553128 TAF7LQ5H9L4 462 aa16.43■□□□□ 0.22
VPS29-211ENST00000553128 APOBEC3HQ6NTF7 200 aaKnown RBP16.43■□□□□ 0.22
VPS29-211ENST00000553128 EVI5O60447 810 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 CYP2C8P10632 490 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 BCRP11274 1271 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 UBXN2AP68543 259 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 BEND3Q5T5X7 828 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 FAM83AQ86UY5 434 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 TEKT1Q969V4 418 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 KCNH4Q9UQ05 1017 aa16.42■□□□□ 0.22
VPS29-211ENST00000553128 ELNP15502 786 aa16.41■□□□□ 0.22
VPS29-211ENST00000553128 MNX1P50219 401 aaPredicted RBP16.41■□□□□ 0.22
VPS29-211ENST00000553128 GPAT2Q6NUI2 795 aa16.41■□□□□ 0.22
VPS29-211ENST00000553128 Q7L0L9 218 aa16.41■□□□□ 0.22
VPS29-211ENST00000553128 FBXO33Q7Z6M2 555 aa16.41■□□□□ 0.22
VPS29-211ENST00000553128 ZDHHC15Q96MV8 337 aa16.41■□□□□ 0.22
VPS29-211ENST00000553128 ZNF341Q9BYN7 854 aa16.41■□□□□ 0.22
VPS29-211ENST00000553128 VCANP13611 3396 aa16.41■□□□□ 0.22
VPS29-211ENST00000553128 HDLBPQ00341 1268 aaKnown RBP16.4■□□□□ 0.22
VPS29-211ENST00000553128 SLAIN1Q8ND83 568 aa16.4■□□□□ 0.22
VPS29-211ENST00000553128 ADCY3O60266 1144 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 INHAP05111 366 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 FCGRTP55899 365 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 DCAF15Q66K64 600 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 DIS3LQ8TF46 1054 aaKnown RBP16.39■□□□□ 0.21
VPS29-211ENST00000553128 DEFB118Q96PH6 123 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 TMOD2Q9NZR1 351 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 ZNF112Q9UJU3 913 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 ALPK3Q96L96 1907 aa16.39■□□□□ 0.21
VPS29-211ENST00000553128 RPAP1Q9BWH6 1393 aaPredicted RBP16.38■□□□□ 0.21
VPS29-211ENST00000553128 GRM8O00222 908 aa16.38■□□□□ 0.21
VPS29-211ENST00000553128 TFRCP02786 760 aaKnown RBP16.38■□□□□ 0.21
VPS29-211ENST00000553128 FLT3LGP49771 235 aa16.38■□□□□ 0.21
VPS29-211ENST00000553128 FKBP1CQ5VVH2 108 aa16.38■□□□□ 0.21
VPS29-211ENST00000553128 DEFB123Q8N688 67 aa16.38■□□□□ 0.21
VPS29-211ENST00000553128 KAZALD1Q96I82 304 aa16.38■□□□□ 0.21
VPS29-211ENST00000553128 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
VPS29-211ENST00000553128 GDF15Q99988 308 aa16.38■□□□□ 0.21
VPS29-211ENST00000553128 EYSQ5T1H1 3165 aa16.37■□□□□ 0.21
VPS29-211ENST00000553128 BCAMP50895 628 aa16.37■□□□□ 0.21
VPS29-211ENST00000553128 TCP10Q12799 353 aa16.37■□□□□ 0.21
VPS29-211ENST00000553128 VPS37DQ86XT2 251 aa16.37■□□□□ 0.21
VPS29-211ENST00000553128 WWC1Q8IX03 1113 aa16.37■□□□□ 0.21
VPS29-211ENST00000553128 HOOK2Q96ED9 719 aa16.37■□□□□ 0.21
VPS29-211ENST00000553128 PARK7Q99497 189 aaKnown RBP16.37■□□□□ 0.21
VPS29-211ENST00000553128 LAMA2P24043 3122 aaKnown RBP16.37■□□□□ 0.21
VPS29-211ENST00000553128 MGAMO43451 1857 aa16.37■□□□□ 0.21
VPS29-211ENST00000553128 VAMP4O75379 141 aa16.36■□□□□ 0.21
VPS29-211ENST00000553128 FRAT2O75474 233 aaPredicted RBP16.36■□□□□ 0.21
VPS29-211ENST00000553128 NFIAQ12857 509 aa16.36■□□□□ 0.21
VPS29-211ENST00000553128 LRRC24Q50LG9 513 aa16.36■□□□□ 0.21
VPS29-211ENST00000553128 TBC1D22AQ8WUA7 517 aa16.36■□□□□ 0.21
VPS29-211ENST00000553128 SUCLG2Q96I99 432 aa16.36■□□□□ 0.21
VPS29-211ENST00000553128 MRIQ9BWK5 157 aa16.36■□□□□ 0.21
VPS29-211ENST00000553128 PRKRIP1Q9H875 184 aaPredicted RBP16.36■□□□□ 0.21
VPS29-211ENST00000553128 PAK6Q9NQU5 681 aaPredicted RBP16.36■□□□□ 0.21
VPS29-211ENST00000553128 ZMYND8Q9ULU4 1186 aaPredicted RBP16.36■□□□□ 0.21
VPS29-211ENST00000553128 SPTBN5Q9NRC6 3674 aaKnown RBP16.35■□□□□ 0.21
VPS29-211ENST00000553128 NOL9Q5SY16 702 aaKnown RBP16.35■□□□□ 0.21
VPS29-211ENST00000553128 C7orf61Q8IZ16 206 aa16.35■□□□□ 0.21
VPS29-211ENST00000553128 FAM151AQ8WW52 585 aa16.35■□□□□ 0.21
VPS29-211ENST00000553128 CRISPLD2Q9H0B8 497 aa16.35■□□□□ 0.21
VPS29-211ENST00000553128 BMP8BP34820 402 aa16.34■□□□□ 0.21
VPS29-211ENST00000553128 HHIPL2Q6UWX4 724 aa16.34■□□□□ 0.21
VPS29-211ENST00000553128 ZFPM1Q8IX07 1006 aa16.34■□□□□ 0.21
VPS29-211ENST00000553128 VGLL2Q8N8G2 317 aa16.34■□□□□ 0.21
VPS29-211ENST00000553128 COL25A1Q9BXS0 654 aaPredicted RBP16.34■□□□□ 0.21
VPS29-211ENST00000553128 MROH5Q6ZUA9 1318 aa16.34■□□□□ 0.21
VPS29-211ENST00000553128 FANCIQ9NVI1 1328 aa16.34■□□□□ 0.21
VPS29-211ENST00000553128 CXCL11O14625 94 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 SLURP2P0DP57 97 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 SYN1P17600 705 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 CDC42EP5Q6NZY7 148 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 PXYLP1Q8TE99 480 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 MTMR10Q9NXD2 777 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.2
VPS29-211ENST00000553128 FAM198AQ9UFP1 575 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 STXBP5LQ9Y2K9 1186 aa16.33■□□□□ 0.2
VPS29-211ENST00000553128 A0A0G2JLL6 359 aaPredicted RBP16.32■□□□□ 0.2
VPS29-211ENST00000553128 TNPO2O14787 897 aaKnown RBP16.32■□□□□ 0.2
VPS29-211ENST00000553128 IRF5Q13568 498 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 DIXDC1Q155Q3 683 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 CAVIN4Q5BKX8 364 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 METTL24Q5JXM2 366 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 GPR153Q6NV75 609 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 PRRT2Q7Z6L0 340 aaPredicted RBP16.32■□□□□ 0.2
VPS29-211ENST00000553128 KLHDC4Q8TBB5 520 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 DAGLAQ9Y4D2 1042 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 ZHX2Q9Y6X8 837 aa16.32■□□□□ 0.2
VPS29-211ENST00000553128 ATRNL1Q5VV63 1379 aa16.31■□□□□ 0.2
VPS29-211ENST00000553128 MAST3O60307 1309 aa16.31■□□□□ 0.2
VPS29-211ENST00000553128 PHF20L1A8MW92 1017 aa16.31■□□□□ 0.2
VPS29-211ENST00000553128 NBPF7P0C2Y1 421 aaPredicted RBP16.31■□□□□ 0.2
VPS29-211ENST00000553128 MAGEA10P43363 369 aaPredicted RBP16.31■□□□□ 0.2
VPS29-211ENST00000553128 EXOSC9Q06265 439 aaKnown RBP16.31■□□□□ 0.2
VPS29-211ENST00000553128 GADL1Q6ZQY3 521 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms