RNA–Protein interactions for RNA: ENST00000552866.5

RFX4-211, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 599 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-211ENST00000552866 MFSD3Q96ES6 412 aa8.1□□□□□ -1.11
RFX4-211ENST00000552866 TM9SF2Q99805 663 aa8.1□□□□□ -1.11
RFX4-211ENST00000552866 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
RFX4-211ENST00000552866 RBSNQ9H1K0 784 aa8.1□□□□□ -1.11
RFX4-211ENST00000552866 RASSF4Q9H2L5 321 aa8.1□□□□□ -1.11
RFX4-211ENST00000552866 STRN4Q9NRL3 753 aa8.1□□□□□ -1.11
RFX4-211ENST00000552866 ATP8A1Q9Y2Q0 1164 aa8.1□□□□□ -1.11
RFX4-211ENST00000552866 FIGNL2A6NMB9 653 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 UPK3BL1B0FP48 263 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 UPK3BL2E5RIL1 263 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 KCNQ2O43526 872 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 MAPTP10636 758 aaKnown RBP8.09□□□□□ -1.11
RFX4-211ENST00000552866 GUCY2CP25092 1073 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 CNGA1P29973 690 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 PRR20EP86478 221 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 PRR20CP86479 221 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 PRR20DP86480 221 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 PRR20BP86481 221 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 PRR20AP86496 221 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 EXOSC10Q01780 885 aaKnown RBP8.09□□□□□ -1.11
RFX4-211ENST00000552866 PCDH1Q08174 1060 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 SCARF1Q14162 830 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 LONRF2Q1L5Z9 754 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 LRRFIP1Q32MZ4 808 aaKnown RBP8.09□□□□□ -1.11
RFX4-211ENST00000552866 GORABQ5T7V8 394 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 RUFY4Q6ZNE9 571 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 EEPD1Q7L9B9 569 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 TAB3Q8N5C8 712 aaPredicted RBP8.09□□□□□ -1.11
RFX4-211ENST00000552866 BSNDQ8WZ55 320 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 BHMTQ93088 406 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 CCDC136Q96JN2 1154 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 MARK1Q9P0L2 795 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 SLC12A7Q9Y666 1083 aa8.09□□□□□ -1.11
RFX4-211ENST00000552866 LOC102724428A0A0B4J2F2 783 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 THBS1P07996 1170 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 ARNTP27540 789 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 CDKN1CP49918 316 aaPredicted RBP8.08□□□□□ -1.12
RFX4-211ENST00000552866 SIK1P57059 783 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 TBX4P57082 545 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 ATP11AP98196 1134 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 UBAP2LQ14157 1087 aaKnown RBP8.08□□□□□ -1.12
RFX4-211ENST00000552866 ZC3H12BQ5HYM0 836 aaKnown RBP8.08□□□□□ -1.12
RFX4-211ENST00000552866 THNSL2Q86YJ6 484 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 STK35Q8TDR2 534 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 CHAC2Q8WUX2 184 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 NINJ1Q92982 152 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 SGSM3Q96HU1 749 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 SLC30A3Q99726 388 aa8.08□□□□□ -1.12
RFX4-211ENST00000552866 STAT3P40763 770 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 ZNF252P-AS1Q0IIN9 211 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 HGSNATQ68CP4 663 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 CCAR1Q8IX12 1150 aaKnown RBP8.07□□□□□ -1.12
RFX4-211ENST00000552866 NIM1KQ8IY84 436 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 CCDC146Q8IYE0 955 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 EXOC8Q8IYI6 725 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 GRIN3AQ8TCU5 1115 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 TMEM40Q8WWA1 233 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 TRERF1Q96PN7 1200 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 SLC26A8Q96RN1 970 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 CBX8Q9HC52 389 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 GEMIN8Q9NWZ8 242 aaKnown RBP8.07□□□□□ -1.12
RFX4-211ENST00000552866 GABBR1Q9UBS5 961 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 PRR12Q9ULL5 1215 aa8.07□□□□□ -1.12
RFX4-211ENST00000552866 GRIN3BO60391 1043 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 SMNDC1O75940 238 aaKnown RBP eCLIP8.06□□□□□ -1.12
RFX4-211ENST00000552866 GHRHP01286 108 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 POU3F3P20264 500 aaPredicted RBP8.06□□□□□ -1.12
RFX4-211ENST00000552866 NEUROD1Q13562 356 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 NCAPHQ15003 741 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 RAB44Q7Z6P3 723 aaPredicted RBP8.06□□□□□ -1.12
RFX4-211ENST00000552866 JAMLQ86YT9 394 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 POP1Q99575 1024 aaKnown RBP8.06□□□□□ -1.12
RFX4-211ENST00000552866 SPATA9Q9BWV2 254 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 PCGF6Q9BYE7 350 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 NDFIP2Q9NV92 336 aa8.06□□□□□ -1.12
RFX4-211ENST00000552866 THRAP3Q9Y2W1 955 aaKnown RBP8.06□□□□□ -1.12
RFX4-211ENST00000552866 PRR36Q9H6K5 1346 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 SENP3-EIF4A1A0A087X0R7 540 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 CCDC163A0A0D9SF12 145 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 PEX14O75381 377 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 FAM153BP0C7A2 387 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 PMLP29590 882 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 SOX5P35711 763 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 PTPN11Q06124 597 aaPredicted RBP8.05□□□□□ -1.12
RFX4-211ENST00000552866 ZNF423Q2M1K9 1284 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 BRDTQ58F21 947 aaPredicted RBP8.05□□□□□ -1.12
RFX4-211ENST00000552866 LRRC47Q8N1G4 583 aaKnown RBP8.05□□□□□ -1.12
RFX4-211ENST00000552866 ZSCAN1Q8NBB4 408 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 MORC4Q8TE76 937 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 C8orf48Q96LL4 319 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 NUCKS1Q9H1E3 243 aaKnown RBP8.05□□□□□ -1.12
RFX4-211ENST00000552866 EPN3Q9H201 632 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 ANTXR1Q9H6X2 564 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 CAAP1Q9H8G2 361 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 HCN2Q9UL51 889 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 SOX13Q9UN79 622 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 EID1Q9Y6B2 187 aa8.05□□□□□ -1.12
RFX4-211ENST00000552866 ZBTB42B2RXF5 422 aa8.04□□□□□ -1.12
RFX4-211ENST00000552866 ALG1L2C9J202 215 aa8.04□□□□□ -1.12
RFX4-211ENST00000552866 J3QW42 95 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms