RNA–Protein interactions for RNA: ENST00000552627.1

SMARCC2-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 409 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-213ENST00000552627 IFT43Q96FT9 208 aa7.64□□□□□ -1.19
SMARCC2-213ENST00000552627 BTBD6Q96KE9 485 aa7.64□□□□□ -1.19
SMARCC2-213ENST00000552627 MKNK1Q9BUB5 465 aa7.64□□□□□ -1.19
SMARCC2-213ENST00000552627 PANK3Q9H999 370 aa7.64□□□□□ -1.19
SMARCC2-213ENST00000552627 RRAGCQ9HB90 399 aa7.64□□□□□ -1.19
SMARCC2-213ENST00000552627 LRFN2Q9ULH4 789 aa7.64□□□□□ -1.19
SMARCC2-213ENST00000552627 SIN3BO75182 1162 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 MICAL2O94851 1124 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 EPB42P16452 691 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 ATP2B4P23634 1241 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 IRS1P35568 1242 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 IDH3AP50213 366 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 VPS72Q15906 364 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 C16orf46Q6P387 395 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 ARHGEF25Q86VW2 580 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 COG3Q96JB2 828 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 WNK3Q9BYP7 1800 aa7.63□□□□□ -1.19
SMARCC2-213ENST00000552627 AATKQ6ZMQ8 1374 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 RGPD2P0DJD1 1756 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 PHF20L1A8MW92 1017 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 CENPBP07199 599 aaPredicted RBP7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 INPP5BP32019 993 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 SNRPNP63162 240 aaKnown RBP7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 CNGB1Q14028 1251 aaPredicted RBP7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 NAA30Q147X3 362 aaPredicted RBP7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 CAPN12Q6ZSI9 719 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 RAB44Q7Z6P3 723 aaPredicted RBP7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 KCNH5Q8NCM2 988 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 ARID3AQ99856 593 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 USP35Q9P2H5 1018 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 THSD7AQ9UPZ6 1657 aa7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 CDK12Q9NYV4 1490 aaPredicted RBP7.62□□□□□ -1.19
SMARCC2-213ENST00000552627 SPATA31A5Q5VU36 1347 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 SPATA31A7Q8IWB4 1347 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 ELOA3CA0A087WX78 387 aaPredicted RBP7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 ELOA3DA6NLF2 546 aaPredicted RBP7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 ALAS2P22557 587 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 TNNT2P45379 298 aaPredicted RBP7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 ARSDP51689 593 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 EVA1CP58658 441 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 RASSF7Q02833 373 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 RRS1Q15050 365 aaKnown RBP7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 ELOA3BQ3SY89 546 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 KANK3Q6NY19 840 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 CHSY3Q70JA7 882 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 ELOA3Q8NG57 546 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 BHMTQ93088 406 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 SAP130Q9H0E3 1048 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 EFCC1Q9HA90 598 aa7.61□□□□□ -1.19
SMARCC2-213ENST00000552627 CGNL1Q0VF96 1302 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 MAP3K19Q56UN5 1328 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 SPATA31A1Q5TZJ5 1347 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 MAP2P11137 1827 aaKnown RBP7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 TMEM88BA6NKF7 163 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 BRD2P25440 801 aaKnown RBP7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 GSK3AP49840 483 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 CCINQ13939 588 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 TREML1Q86YW5 311 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 LTV1Q96GA3 475 aaPredicted RBP7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 PNMA5Q96PV4 448 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 GSX2Q9BZM3 304 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 MKL2Q9ULH7 1088 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 ABCC6O95255 1503 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 CRB1P82279 1406 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 LRRC37A3O60309 1634 aa7.6□□□□□ -1.19
SMARCC2-213ENST00000552627 ADARB2-AS1A8MUL3 147 aa7.59□□□□□ -1.19
SMARCC2-213ENST00000552627 OPLAHO14841 1288 aa7.59□□□□□ -1.19
SMARCC2-213ENST00000552627 GDF11O95390 407 aa7.59□□□□□ -1.19
SMARCC2-213ENST00000552627 TOM1L2Q6ZVM7 507 aa7.59□□□□□ -1.19
SMARCC2-213ENST00000552627 TMEM151AQ8N4L1 468 aa7.59□□□□□ -1.19
SMARCC2-213ENST00000552627 TNFRSF25Q93038 417 aa7.59□□□□□ -1.19
SMARCC2-213ENST00000552627 PARP4Q9UKK3 1724 aaKnown RBP7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 WDR17Q8IZU2 1322 aa7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 FAM208AQ9UK61 1670 aaKnown RBP7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 PPM1GO15355 546 aaPredicted RBP7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 HOXB4P17483 251 aaPredicted RBP7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 GRNP28799 593 aaKnown RBP7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 HOXC9P31274 260 aa7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 AMPHP49418 695 aa7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 CC2D1BQ5T0F9 858 aaKnown RBP7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 ANKRD24Q8TF21 1146 aa7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 MDFIQ99750 246 aa7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 C11orf16Q9NQ32 467 aa7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 KNSTRNQ9Y448 316 aa7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.58□□□□□ -1.2
SMARCC2-213ENST00000552627 PIK3R2O00459 728 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 HSP90AB2PQ58FF8 381 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 LINC00114Q6XXX2 140 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 ETFBKMTQ8IXQ9 262 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 RGL4Q8IZJ4 473 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 IP6K1Q92551 441 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 IGFLR1Q9H665 355 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 NLRP2Q9NX02 1062 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 SEPT3Q9UH03 358 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 RTCBQ9Y3I0 505 aaKnown RBP7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 BLMP54132 1417 aaPredicted RBP7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 RTL1A6NKG5 1358 aa7.57□□□□□ -1.2
SMARCC2-213ENST00000552627 TNFRSF10BO14763 440 aa7.56□□□□□ -1.2
SMARCC2-213ENST00000552627 NFKB1P19838 968 aa7.56□□□□□ -1.2
SMARCC2-213ENST00000552627 SSFA2P28290 1259 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms