RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 LRCH3Q96II8 777 aa19.4■□□□□ 0.7
CACNB3-220ENST00000551716 ZDHHC15Q96MV8 337 aa19.4■□□□□ 0.7
CACNB3-220ENST00000551716 KCNH4Q9UQ05 1017 aa19.4■□□□□ 0.7
CACNB3-220ENST00000551716 COL6A3P12111 3177 aa19.39■□□□□ 0.69
CACNB3-220ENST00000551716 PRKCZQ05513 592 aa19.39■□□□□ 0.69
CACNB3-220ENST00000551716 PXYLP1Q8TE99 480 aa19.39■□□□□ 0.69
CACNB3-220ENST00000551716 UNC93B1Q9H1C4 597 aa19.39■□□□□ 0.69
CACNB3-220ENST00000551716 ADGRA2Q96PE1 1338 aa19.39■□□□□ 0.69
CACNB3-220ENST00000551716 ADCY3O60266 1144 aa19.38■□□□□ 0.69
CACNB3-220ENST00000551716 FRAT2O75474 233 aaPredicted RBP19.38■□□□□ 0.69
CACNB3-220ENST00000551716 ZNF594Q96JF6 807 aaPredicted RBP19.38■□□□□ 0.69
CACNB3-220ENST00000551716 SUGT1Q9Y2Z0 365 aa19.38■□□□□ 0.69
CACNB3-220ENST00000551716 MAST3O60307 1309 aa19.37■□□□□ 0.69
CACNB3-220ENST00000551716 CXCL11O14625 94 aa19.37■□□□□ 0.69
CACNB3-220ENST00000551716 BCRP11274 1271 aa19.37■□□□□ 0.69
CACNB3-220ENST00000551716 CACNB3P54284 484 aa19.37■□□□□ 0.69
CACNB3-220ENST00000551716 CAVIN4Q5BKX8 364 aa19.37■□□□□ 0.69
CACNB3-220ENST00000551716 DEFB123Q8N688 67 aa19.37■□□□□ 0.69
CACNB3-220ENST00000551716 STXBP5LQ9Y2K9 1186 aa19.37■□□□□ 0.69
CACNB3-220ENST00000551716 HHIPL2Q6UWX4 724 aa19.36■□□□□ 0.69
CACNB3-220ENST00000551716 MIGA2Q7L4E1 593 aa19.36■□□□□ 0.69
CACNB3-220ENST00000551716 NECAB2Q7Z6G3 386 aa19.36■□□□□ 0.69
CACNB3-220ENST00000551716 FBXO33Q7Z6M2 555 aa19.36■□□□□ 0.69
CACNB3-220ENST00000551716 TSR2Q969E8 191 aaKnown RBP19.36■□□□□ 0.69
CACNB3-220ENST00000551716 ZNF112Q9UJU3 913 aa19.36■□□□□ 0.69
CACNB3-220ENST00000551716 RPAP1Q9BWH6 1393 aaPredicted RBP19.35■□□□□ 0.69
CACNB3-220ENST00000551716 IRF5Q13568 498 aa19.35■□□□□ 0.69
CACNB3-220ENST00000551716 APOBEC3HQ6NTF7 200 aaKnown RBP19.35■□□□□ 0.69
CACNB3-220ENST00000551716 FASTKD5Q7L8L6 764 aaKnown RBP19.35■□□□□ 0.69
CACNB3-220ENST00000551716 DEFB118Q96PH6 123 aa19.35■□□□□ 0.69
CACNB3-220ENST00000551716 GDF15Q99988 308 aa19.35■□□□□ 0.69
CACNB3-220ENST00000551716 LAMA3Q16787 3333 aa19.35■□□□□ 0.69
CACNB3-220ENST00000551716 MROH5Q6ZUA9 1318 aa19.34■□□□□ 0.69
CACNB3-220ENST00000551716 INPP5BP32019 993 aa19.34■□□□□ 0.69
CACNB3-220ENST00000551716 FLT3LGP49771 235 aa19.34■□□□□ 0.69
CACNB3-220ENST00000551716 CHAF1AQ13111 956 aaPredicted RBP19.34■□□□□ 0.69
CACNB3-220ENST00000551716 MOGSQ13724 837 aa19.34■□□□□ 0.69
CACNB3-220ENST00000551716 FAM151AQ8WW52 585 aa19.34■□□□□ 0.69
CACNB3-220ENST00000551716 CRISPLD2Q9H0B8 497 aa19.34■□□□□ 0.69
CACNB3-220ENST00000551716 ARAP2Q8WZ64 1704 aa19.34■□□□□ 0.69
CACNB3-220ENST00000551716 GRM8O00222 908 aa19.33■□□□□ 0.68
CACNB3-220ENST00000551716 INHAP05111 366 aa19.33■□□□□ 0.68
CACNB3-220ENST00000551716 GRIK5Q16478 980 aa19.33■□□□□ 0.68
CACNB3-220ENST00000551716 LRIT3Q3SXY7 679 aa19.33■□□□□ 0.68
CACNB3-220ENST00000551716 NOL9Q5SY16 702 aaKnown RBP19.33■□□□□ 0.68
CACNB3-220ENST00000551716 BEND3Q5T5X7 828 aa19.33■□□□□ 0.68
CACNB3-220ENST00000551716 ANKLE1Q8NAG6 615 aa19.33■□□□□ 0.68
CACNB3-220ENST00000551716 PAWRQ96IZ0 340 aaKnown RBP19.33■□□□□ 0.68
CACNB3-220ENST00000551716 PAK6Q9NQU5 681 aaPredicted RBP19.33■□□□□ 0.68
CACNB3-220ENST00000551716 GABRQQ9UN88 632 aa19.33■□□□□ 0.68
CACNB3-220ENST00000551716 ZSWIM8A7E2V4 1837 aa19.32■□□□□ 0.68
CACNB3-220ENST00000551716 EPHA10Q5JZY3 1008 aa19.32■□□□□ 0.68
CACNB3-220ENST00000551716 C9orf78Q9NZ63 289 aaPredicted RBP19.32■□□□□ 0.68
CACNB3-220ENST00000551716 SLC45A1Q9Y2W3 748 aa19.32■□□□□ 0.68
CACNB3-220ENST00000551716 TNPO2O14787 897 aaKnown RBP19.31■□□□□ 0.68
CACNB3-220ENST00000551716 CYP2C8P10632 490 aa19.31■□□□□ 0.68
CACNB3-220ENST00000551716 BCAMP50895 628 aa19.31■□□□□ 0.68
CACNB3-220ENST00000551716 CCDC27Q2M243 656 aa19.31■□□□□ 0.68
CACNB3-220ENST00000551716 GPAT2Q6NUI2 795 aa19.31■□□□□ 0.68
CACNB3-220ENST00000551716 IQSEC3Q9UPP2 1182 aaPredicted RBP19.31■□□□□ 0.68
CACNB3-220ENST00000551716 ELNP15502 786 aa19.3■□□□□ 0.68
CACNB3-220ENST00000551716 COA7Q96BR5 231 aa19.3■□□□□ 0.68
CACNB3-220ENST00000551716 DDX10Q13206 875 aaKnown RBP19.29■□□□□ 0.68
CACNB3-220ENST00000551716 PICK1Q9NRD5 415 aa19.29■□□□□ 0.68
CACNB3-220ENST00000551716 MTMR10Q9NXD2 777 aa19.29■□□□□ 0.68
CACNB3-220ENST00000551716 IL16Q14005 1332 aa19.28■□□□□ 0.68
CACNB3-220ENST00000551716 TDHQ8IZJ6 230 aa19.28■□□□□ 0.68
CACNB3-220ENST00000551716 SMCR8Q8TEV9 937 aaPredicted RBP19.28■□□□□ 0.68
CACNB3-220ENST00000551716 PUS3Q9BZE2 481 aaKnown RBP19.28■□□□□ 0.68
CACNB3-220ENST00000551716 A0A0G2JLL6 359 aaPredicted RBP19.27■□□□□ 0.68
CACNB3-220ENST00000551716 PRRT2Q7Z6L0 340 aaPredicted RBP19.27■□□□□ 0.68
CACNB3-220ENST00000551716 WWC1Q8IX03 1113 aa19.27■□□□□ 0.68
CACNB3-220ENST00000551716 C7orf61Q8IZ16 206 aa19.27■□□□□ 0.68
CACNB3-220ENST00000551716 WDR66Q8TBY9 1149 aa19.27■□□□□ 0.68
CACNB3-220ENST00000551716 NBPF3Q9H094 633 aa19.27■□□□□ 0.68
CACNB3-220ENST00000551716 ZHX2Q9Y6X8 837 aa19.27■□□□□ 0.68
CACNB3-220ENST00000551716 F6X3S4 739 aa19.26■□□□□ 0.67
CACNB3-220ENST00000551716 ALDH1L1O75891 902 aa19.26■□□□□ 0.67
CACNB3-220ENST00000551716 PDE8BO95263 885 aa19.26■□□□□ 0.67
CACNB3-220ENST00000551716 TCP10Q12799 353 aa19.26■□□□□ 0.67
CACNB3-220ENST00000551716 METTL24Q5JXM2 366 aa19.26■□□□□ 0.67
CACNB3-220ENST00000551716 COL25A1Q9BXS0 654 aaPredicted RBP19.26■□□□□ 0.67
CACNB3-220ENST00000551716 XRN2Q9H0D6 950 aaKnown RBP eCLIP19.26■□□□□ 0.67
CACNB3-220ENST00000551716 TAOK2Q9UL54 1235 aa19.26■□□□□ 0.67
CACNB3-220ENST00000551716 KIF16BQ96L93 1317 aa19.25■□□□□ 0.67
CACNB3-220ENST00000551716 VAMP4O75379 141 aa19.25■□□□□ 0.67
CACNB3-220ENST00000551716 Q7L0L9 218 aa19.25■□□□□ 0.67
CACNB3-220ENST00000551716 ZMYND8Q9ULU4 1186 aaPredicted RBP19.25■□□□□ 0.67
CACNB3-220ENST00000551716 A0A1B0GUL6 1792 aa19.24■□□□□ 0.67
CACNB3-220ENST00000551716 IFIT1P09914 478 aaKnown RBP19.24■□□□□ 0.67
CACNB3-220ENST00000551716 CDC42EP5Q6NZY7 148 aa19.24■□□□□ 0.67
CACNB3-220ENST00000551716 GADL1Q6ZQY3 521 aa19.24■□□□□ 0.67
CACNB3-220ENST00000551716 SCYL3Q8IZE3 742 aa19.24■□□□□ 0.67
CACNB3-220ENST00000551716 UBE2OQ9C0C9 1292 aaKnown RBP19.24■□□□□ 0.67
CACNB3-220ENST00000551716 AFG3L2Q9Y4W6 797 aa19.24■□□□□ 0.67
CACNB3-220ENST00000551716 PTPRAP18433 802 aa19.23■□□□□ 0.67
CACNB3-220ENST00000551716 ZEB1P37275 1124 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-220ENST00000551716 MAGEA10P43363 369 aaPredicted RBP19.23■□□□□ 0.67
CACNB3-220ENST00000551716 NCBP3Q53F19 620 aaKnown RBP19.23■□□□□ 0.67
CACNB3-220ENST00000551716 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms