RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 UNC80Q8N2C7 3258 aa15.22■□□□□ 0.03
PTCH1-222ENST00000551425 UBE4AQ14139 1066 aa15.21■□□□□ 0.03
PTCH1-222ENST00000551425 G2E3Q7L622 706 aa15.21■□□□□ 0.03
PTCH1-222ENST00000551425 LINS1Q8NG48 757 aa15.21■□□□□ 0.03
PTCH1-222ENST00000551425 FAM84BQ96KN1 310 aaPredicted RBP15.21■□□□□ 0.03
PTCH1-222ENST00000551425 DEFB118Q96PH6 123 aa15.21■□□□□ 0.03
PTCH1-222ENST00000551425 ZNF341Q9BYN7 854 aa15.21■□□□□ 0.03
PTCH1-222ENST00000551425 RPAP1Q9BWH6 1393 aaPredicted RBP15.21■□□□□ 0.02
PTCH1-222ENST00000551425 MYBBP1AQ9BQG0 1328 aaKnown RBP15.2■□□□□ 0.02
PTCH1-222ENST00000551425 PLIN1O60240 522 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 INHAP05111 366 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 INPP5BP32019 993 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 GYG1P46976 350 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 IRF5Q13568 498 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 GRIK5Q16478 980 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 LDHAL6AQ6ZMR3 332 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 NECAB2Q7Z6G3 386 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 PAWRQ96IZ0 340 aaKnown RBP15.2■□□□□ 0.02
PTCH1-222ENST00000551425 ZDHHC15Q96MV8 337 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 MRIQ9BWK5 157 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 TMOD2Q9NZR1 351 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 ZNF112Q9UJU3 913 aa15.2■□□□□ 0.02
PTCH1-222ENST00000551425 SLC4A2P04920 1241 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 ELNP15502 786 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 FLT3LGP49771 235 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 BCAMP50895 628 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 GPAT2Q6NUI2 795 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 DNAAF4Q8WXU2 420 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 TEKT1Q969V4 418 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 CHMP3Q9Y3E7 222 aa15.19■□□□□ 0.02
PTCH1-222ENST00000551425 CYP2C8P10632 490 aa15.18■□□□□ 0.02
PTCH1-222ENST00000551425 CCDC57Q2TAC2 916 aa15.18■□□□□ 0.02
PTCH1-222ENST00000551425 APOBEC3HQ6NTF7 200 aaKnown RBP15.18■□□□□ 0.02
PTCH1-222ENST00000551425 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.18■□□□□ 0.02
PTCH1-222ENST00000551425 C7orf61Q8IZ16 206 aa15.18■□□□□ 0.02
PTCH1-222ENST00000551425 TDHQ8IZJ6 230 aa15.18■□□□□ 0.02
PTCH1-222ENST00000551425 ANKLE1Q8NAG6 615 aa15.18■□□□□ 0.02
PTCH1-222ENST00000551425 TBC1D22AQ8WUA7 517 aa15.18■□□□□ 0.02
PTCH1-222ENST00000551425 CNNM1Q9NRU3 951 aa15.18■□□□□ 0.02
PTCH1-222ENST00000551425 CXCL11O14625 94 aa15.17■□□□□ 0.02
PTCH1-222ENST00000551425 APAF1O14727 1248 aa15.17■□□□□ 0.02
PTCH1-222ENST00000551425 FLIIQ13045 1269 aa15.17■□□□□ 0.02
PTCH1-222ENST00000551425 NOL9Q5SY16 702 aaKnown RBP15.17■□□□□ 0.02
PTCH1-222ENST00000551425 LMBR1LQ6UX01 489 aa15.17■□□□□ 0.02
PTCH1-222ENST00000551425 MIGA2Q7L4E1 593 aa15.17■□□□□ 0.02
PTCH1-222ENST00000551425 DIS3LQ8TF46 1054 aaKnown RBP15.17■□□□□ 0.02
PTCH1-222ENST00000551425 ZNF594Q96JF6 807 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-222ENST00000551425 ZMYND8Q9ULU4 1186 aaPredicted RBP15.17■□□□□ 0.02
PTCH1-222ENST00000551425 MAGEA10P43363 369 aaPredicted RBP15.16■□□□□ 0.02
PTCH1-222ENST00000551425 TAF7LQ5H9L4 462 aa15.16■□□□□ 0.02
PTCH1-222ENST00000551425 FBXO33Q7Z6M2 555 aa15.16■□□□□ 0.02
PTCH1-222ENST00000551425 FKBP5Q13451 457 aaPredicted RBP15.15■□□□□ 0.02
PTCH1-222ENST00000551425 EPHA10Q5JZY3 1008 aa15.15■□□□□ 0.02
PTCH1-222ENST00000551425 FAM151AQ8WW52 585 aa15.15■□□□□ 0.02
PTCH1-222ENST00000551425 ALPK3Q96L96 1907 aa15.15■□□□□ 0.02
PTCH1-222ENST00000551425 TNPO2O14787 897 aaKnown RBP15.14■□□□□ 0.01
PTCH1-222ENST00000551425 TWISTNBQ3B726 338 aaPredicted RBP15.14■□□□□ 0.01
PTCH1-222ENST00000551425 HHIPL2Q6UWX4 724 aa15.14■□□□□ 0.01
PTCH1-222ENST00000551425 FASTKD5Q7L8L6 764 aaKnown RBP15.14■□□□□ 0.01
PTCH1-222ENST00000551425 NBPF3Q9H094 633 aa15.14■□□□□ 0.01
PTCH1-222ENST00000551425 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.14■□□□□ 0.01
PTCH1-222ENST00000551425 SLC45A1Q9Y2W3 748 aa15.14■□□□□ 0.01
PTCH1-222ENST00000551425 SUGT1Q9Y2Z0 365 aa15.14■□□□□ 0.01
PTCH1-222ENST00000551425 MGAMO43451 1857 aa15.14■□□□□ 0.01
PTCH1-222ENST00000551425 MAST3O60307 1309 aa15.14■□□□□ 0.01
PTCH1-222ENST00000551425 A0A0G2JLL6 359 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-222ENST00000551425 CHAF1AQ13111 956 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-222ENST00000551425 PRRT2Q7Z6L0 340 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-222ENST00000551425 VPS37DQ86XT2 251 aa15.13■□□□□ 0.01
PTCH1-222ENST00000551425 TSR2Q969E8 191 aaKnown RBP15.13■□□□□ 0.01
PTCH1-222ENST00000551425 UBE2OQ9C0C9 1292 aaKnown RBP15.13■□□□□ 0.01
PTCH1-222ENST00000551425 IQSEC3Q9UPP2 1182 aaPredicted RBP15.13■□□□□ 0.01
PTCH1-222ENST00000551425 RPTORQ8N122 1335 aa15.13■□□□□ 0.01
PTCH1-222ENST00000551425 SYN1P17600 705 aa15.12■□□□□ 0.01
PTCH1-222ENST00000551425 BEND3Q5T5X7 828 aa15.12■□□□□ 0.01
PTCH1-222ENST00000551425 FAM109BQ6ICB4 259 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-222ENST00000551425 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
PTCH1-222ENST00000551425 FRAT2O75474 233 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-222ENST00000551425 CAVIN4Q5BKX8 364 aa15.11■□□□□ 0.01
PTCH1-222ENST00000551425 COA7Q96BR5 231 aa15.11■□□□□ 0.01
PTCH1-222ENST00000551425 PUS3Q9BZE2 481 aaKnown RBP15.11■□□□□ 0.01
PTCH1-222ENST00000551425 C11orf49Q9H6J7 331 aa15.11■□□□□ 0.01
PTCH1-222ENST00000551425 MROH5Q6ZUA9 1318 aa15.11■□□□□ 0.01
PTCH1-222ENST00000551425 GUCD1Q96NT3 240 aa15.1■□□□□ 0.01
PTCH1-222ENST00000551425 PRDM6Q9NQX0 595 aa15.1■□□□□ 0.01
PTCH1-222ENST00000551425 TAOK2Q9UL54 1235 aa15.1■□□□□ 0.01
PTCH1-222ENST00000551425 ZHX2Q9Y6X8 837 aa15.1■□□□□ 0.01
PTCH1-222ENST00000551425 GRM8O00222 908 aa15.09■□□□□ 0.01
PTCH1-222ENST00000551425 HMGCRP04035 888 aa15.09■□□□□ 0.01
PTCH1-222ENST00000551425 TCP10Q12799 353 aa15.09■□□□□ 0.01
PTCH1-222ENST00000551425 SMCR8Q8TEV9 937 aaPredicted RBP15.09■□□□□ 0.01
PTCH1-222ENST00000551425 OGDHLQ9ULD0 1010 aa15.09■□□□□ 0.01
PTCH1-222ENST00000551425 AFG3L2Q9Y4W6 797 aa15.09■□□□□ 0.01
PTCH1-222ENST00000551425 PHF20L1A8MW92 1017 aa15.08■□□□□ 0
PTCH1-222ENST00000551425 PTPRAP18433 802 aa15.08■□□□□ 0
PTCH1-222ENST00000551425 GADL1Q6ZQY3 521 aa15.08■□□□□ 0
PTCH1-222ENST00000551425 SCYL3Q8IZE3 742 aa15.08■□□□□ 0
PTCH1-222ENST00000551425 HMX1Q9NP08 348 aaPredicted RBP15.08■□□□□ 0
PTCH1-222ENST00000551425 PICK1Q9NRD5 415 aa15.08■□□□□ 0
PTCH1-222ENST00000551425 ATRNL1Q5VV63 1379 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms