RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 VGLL2Q8N8G2 317 aa9.01□□□□□ -0.97
SMARCD1-210ENST00000551352 CNKSR2Q8WXI2 1034 aa9.01□□□□□ -0.97
SMARCD1-210ENST00000551352 CDK5RAP2Q96SN8 1893 aa9.01□□□□□ -0.97
SMARCD1-210ENST00000551352 IL1RAPL2Q9NP60 686 aa9.01□□□□□ -0.97
SMARCD1-210ENST00000551352 PA2G4Q9UQ80 394 aaKnown RBP9.01□□□□□ -0.97
SMARCD1-210ENST00000551352 CHMP3Q9Y3E7 222 aa9.01□□□□□ -0.97
SMARCD1-210ENST00000551352 RIPOR2Q9Y4F9 1068 aa9.01□□□□□ -0.97
SMARCD1-210ENST00000551352 KCNJ4P48050 445 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 RFX5P48382 616 aaPredicted RBP9□□□□□ -0.97
SMARCD1-210ENST00000551352 MFAP1P55081 439 aaKnown RBP9□□□□□ -0.97
SMARCD1-210ENST00000551352 SPDYE2Q495Y8 402 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 NOM1Q5C9Z4 860 aaKnown RBP9□□□□□ -0.97
SMARCD1-210ENST00000551352 LDHAL6AQ6ZMR3 332 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 ZNF804AQ7Z570 1209 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 KLHDC4Q8TBB5 520 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 PTPN18Q99952 460 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 COPRSQ9NQ92 184 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 ZBTB4Q9P1Z0 1013 aaPredicted RBP9□□□□□ -0.97
SMARCD1-210ENST00000551352 HDAC9Q9UKV0 1011 aa9□□□□□ -0.97
SMARCD1-210ENST00000551352 IQSEC3Q9UPP2 1182 aaPredicted RBP9□□□□□ -0.97
SMARCD1-210ENST00000551352 ATAD5Q96QE3 1844 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 EIF5BO60841 1220 aaKnown RBP8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 MMP14P50281 582 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 G3BP1Q13283 466 aaKnown RBP eCLIP8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 RASA3Q14644 834 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 TSHZ3Q63HK5 1081 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 ARMC9Q7Z3E5 817 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 FBXO33Q7Z6M2 555 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 IFNL1Q8IU54 200 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 TDRD3Q9H7E2 651 aaKnown RBP8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 VEZTQ9HBM0 779 aa8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 ZNF70Q9UC06 446 aaPredicted RBP8.99□□□□□ -0.97
SMARCD1-210ENST00000551352 SIPA1L1O43166 1804 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 FKTNO75072 461 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 NF2P35240 595 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 UBE4AQ14139 1066 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 CCDC57Q2TAC2 916 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 MFSD14BQ5SR56 506 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 FBXO46Q6PJ61 603 aaPredicted RBP8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 CLASRPQ8N2M8 674 aaKnown RBP8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 MS4A4AQ96JQ5 239 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 C22orf23Q9BZE7 217 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 CNNM1Q9NRU3 951 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 DOCK1Q14185 1865 aa8.98□□□□□ -0.97
SMARCD1-210ENST00000551352 DOCK3Q8IZD9 2030 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 TESPA1A2RU30 521 aaPredicted RBP8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 POTEFA5A3E0 1075 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 ZBTB48P10074 688 aaPredicted RBP8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 FGFR2P21802 821 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 HIBADHP31937 336 aaKnown RBP8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 CRKP46108 304 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 CACNB3P54284 484 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 SREBF2Q12772 1141 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 CRHR2Q13324 411 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 CASC1Q6TDU7 716 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 OTOP1Q7RTM1 612 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 PI4K2BQ8TCG2 481 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 TMEM39BQ9GZU3 492 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 SIL1Q9H173 461 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 ELP3Q9H9T3 547 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 TTF2Q9UNY4 1162 aaKnown RBP8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 PPP2R3BQ9Y5P8 575 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 TTC41PQ6P2S7 1318 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 ALPK3Q96L96 1907 aa8.97□□□□□ -0.97
SMARCD1-210ENST00000551352 MANSC4A6NHS7 340 aaPredicted RBP8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 TCP10L2B9ZVM9 353 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 IFIT2P09913 472 aaKnown RBP8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 RBM25P49756 843 aaKnown RBP8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 BCAMP50895 628 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 AACSQ86V21 672 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 CD99L2Q8TCZ2 262 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 BRI3BPQ8WY22 251 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 SLC10A4Q96EP9 437 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 GPATCH3Q96I76 525 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 FOCADQ5VW36 1801 aa8.96□□□□□ -0.98
SMARCD1-210ENST00000551352 ERC2O15083 957 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 GLRX3O76003 335 aaKnown RBP8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 RBM5P52756 815 aaKnown RBP eCLIP8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 CHAF1AQ13111 956 aaPredicted RBP8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 VGLL4Q14135 290 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 TAF7LQ5H9L4 462 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 ATG9AQ7Z3C6 839 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 FAM43AQ8N2R8 423 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 EAF2Q96CJ1 260 aaPredicted RBP8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 OPTNQ96CV9 577 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 ECHDC1Q9NTX5 307 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 SNCAIPQ9Y6H5 919 aa8.95□□□□□ -0.98
SMARCD1-210ENST00000551352 TRIM6-TRIM34B2RNG4 842 aa8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 PPP1R12BO60237 982 aaPredicted RBP8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 PDE8BO95263 885 aa8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 PKN2Q16513 984 aaKnown RBP8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 APOBEC3HQ6NTF7 200 aaKnown RBP8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 ERICH6Q7L0X2 663 aa8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 ANKRD13AQ8IZ07 590 aa8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 RILPL2Q969X0 211 aa8.94□□□□□ -0.98
SMARCD1-210ENST00000551352 PTPN22Q9Y2R2 807 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms