RNA–Protein interactions for RNA: ENST00000550804.5

CALCOCO1-218, Transcript of calcium binding and coiled-coil domain 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CALCOCO1, Length 2,291 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-218ENST00000550804 RPS6KA4O75676 772 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 PTGS1P23219 599 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 RBM10P98175 930 aaKnown RBP16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 MICU3Q86XE3 530 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 LINC00301Q8NCQ3 95 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 TRIM5Q9C035 493 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 ZSWIM5Q9P217 1185 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 UQCRFS1P1P0C7P4 283 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 NDUFA8P51970 172 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 IFNL3Q8IZI9 196 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 KLHL34Q8N239 644 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 MIGA1Q8NAN2 632 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 IGDCC4Q8TDY8 1250 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 RTEL1Q9NZ71 1219 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 ABCC12Q96J65 1359 aa16.54■□□□□ 0.24
CALCOCO1-218ENST00000550804 SMIM22K7EJ46 135 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 DHX16O60231 1041 aaKnown RBP16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 TPM2P07951 284 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 BCL2L12Q9HB09 334 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 SH2B2O14492 632 aaPredicted RBP16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 SLC5A1P13866 664 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 FAM160A1Q05DH4 1040 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 LRMPQ12912 555 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 IQCB1Q15051 598 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 CCDC73Q6ZRK6 1079 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 C3orf67Q6ZVT6 689 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 CCDC186Q7Z3E2 898 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 ZKSCAN3Q9BRR0 538 aa16.53■□□□□ 0.24
CALCOCO1-218ENST00000550804 UQCRHLA0A096LP55 91 aa16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 PATL2C9JE40 543 aaKnown RBP16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 UQCRHP07919 91 aa16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 METAP2P50579 478 aaKnown RBP eCLIP16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 APOA5Q6Q788 366 aa16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 AMIGO3Q86WK7 504 aa16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 LCORLQ8N3X6 602 aa16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 FAM217BQ9NTX9 383 aaPredicted RBP16.52■□□□□ 0.24
CALCOCO1-218ENST00000550804 BCORQ6W2J9 1755 aa16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 GSG1L2A8MUP6 293 aa16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 GNPATO15228 680 aa16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 KINO60870 393 aaKnown RBP16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 MARCKSP29966 332 aaPredicted RBP16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 STK38Q15208 465 aa16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 SF3A1Q15459 793 aaKnown RBP16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 ADALQ6DHV7 355 aa16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 DRC7Q8IY82 874 aa16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 FMR1NBQ8N0W7 255 aaPredicted RBP16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 TDRD7Q8NHU6 1098 aaKnown RBP16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 NARFQ9UHQ1 456 aa16.52■□□□□ 0.23
CALCOCO1-218ENST00000550804 ZNF75DP51815 510 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 KIF23Q02241 960 aaPredicted RBP16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 CHRNDQ07001 517 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 MAP3K12Q12852 859 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 RRP12Q5JTH9 1297 aaKnown RBP16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 ATL3Q6DD88 541 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 NFXL1Q6ZNB6 911 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 NAPBQ9H115 298 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 SBF2Q86WG5 1849 aa16.51■□□□□ 0.23
CALCOCO1-218ENST00000550804 TBC1D9BQ66K14 1250 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 ADGRA1Q86SQ6 560 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 PLA2G4DQ86XP0 818 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 CMTR1Q8N1G2 835 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 CCDC82Q8N4S0 544 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 SDF4Q9BRK5 362 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 ALG1Q9BT22 464 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 LY9Q9HBG7 655 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 SRP68Q9UHB9 627 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 AKAP11Q9UKA4 1901 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 DDX60Q8IY21 1712 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 SPEF2Q9C093 1822 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 RGL2O15211 777 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 RANBP6O60518 1105 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 ERFEQ4G0M1 354 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 CCDC152Q4G0S7 254 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 TMEM67Q5HYA8 995 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 BICDL1Q6ZP65 573 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 MRPS27Q92552 414 aaKnown RBP16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 TSC1Q92574 1164 aa16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 BCL11BQ9C0K0 894 aaPredicted RBP16.5■□□□□ 0.23
CALCOCO1-218ENST00000550804 SPTLC2O15270 562 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 WDHD1O75717 1129 aaPredicted RBP16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 IGHMBP2P38935 993 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 NTRK3Q16288 839 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 SYNE3Q6ZMZ3 975 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 TOMM22Q9NS69 142 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 RTCBQ9Y3I0 505 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 ZMYM6O95789 1325 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 GYG1P46976 350 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 CCDC144BQ3MJ40 725 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 KRT40Q6A162 431 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 ARHGEF1Q92888 912 aaKnown RBP16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 LRP2BPQ9P2M1 347 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 ABCF2Q9UG63 623 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 SLC4A4Q9Y6R1 1079 aa16.49■□□□□ 0.23
CALCOCO1-218ENST00000550804 RTL9Q8NET4 1388 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 IFIT3O14879 490 aaKnown RBP16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 ZBTB43O43298 467 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 LY75O60449 1722 aa16.48■□□□□ 0.23
CALCOCO1-218ENST00000550804 GUCY1A2P33402 732 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms