RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 FAM198AQ9UFP1 575 aa14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 ZNF112Q9UJU3 913 aa14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 SUGT1Q9Y2Z0 365 aa14.53□□□□□ -0.08
SMARCD1-208ENST00000550280 ATRNL1Q5VV63 1379 aa14.52□□□□□ -0.08
SMARCD1-208ENST00000550280 CETPP11597 493 aa14.52□□□□□ -0.09
SMARCD1-208ENST00000550280 SLFN5Q08AF3 891 aa14.52□□□□□ -0.09
SMARCD1-208ENST00000550280 C17orf99Q6UX52 265 aa14.52□□□□□ -0.09
SMARCD1-208ENST00000550280 ZFPM1Q8IX07 1006 aa14.52□□□□□ -0.09
SMARCD1-208ENST00000550280 CDCA7LQ96GN5 454 aa14.52□□□□□ -0.09
SMARCD1-208ENST00000550280 MAST3O60307 1309 aa14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 MYCP01106 439 aaPredicted RBP14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 IFIT1P09914 478 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 SLURP2P0DP57 97 aa14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 SNAPC2Q13487 334 aa14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 SLC9C1Q4G0N8 1177 aa14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 FAM151AQ8WW52 585 aa14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 LPIN2Q92539 896 aa14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 ZCCHC17Q9NP64 241 aaKnown RBP14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 KCNH4Q9UQ05 1017 aa14.51□□□□□ -0.09
SMARCD1-208ENST00000550280 RFX7Q2KHR2 1363 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 ECM2O94769 699 aaPredicted RBP14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 SLC5A1P13866 664 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 PPATQ06203 517 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 TCP10Q12799 353 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 SHISA4Q96DD7 197 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 ZNF341Q9BYN7 854 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 TMOD2Q9NZR1 351 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 CPA4Q9UI42 421 aa14.5□□□□□ -0.09
SMARCD1-208ENST00000550280 E9PSI1 815 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 PHKA1P46020 1223 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 MTFR1Q15390 333 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 DCAF15Q66K64 600 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 TRMT2AQ8IZ69 625 aaKnown RBP14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 WDR66Q8TBY9 1149 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 GCC1Q96CN9 775 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 TRIM47Q96LD4 638 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 TMEM106CQ9BVX2 250 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 SIL1Q9H173 461 aa14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 PA2G4Q9UQ80 394 aaKnown RBP14.49□□□□□ -0.09
SMARCD1-208ENST00000550280 SALL1Q9NSC2 1324 aa14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 ADORA1P30542 326 aa14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 FXR1P51114 621 aaKnown RBP eCLIP14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 ATP2B3Q16720 1220 aa14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 NOL9Q5SY16 702 aaKnown RBP14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 GPAT2Q6NUI2 795 aa14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 SH3BP5LQ7L8J4 393 aa14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 ANKRD23Q86SG2 305 aa14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.48□□□□□ -0.09
SMARCD1-208ENST00000550280 PHF20L1A8MW92 1017 aa14.47□□□□□ -0.09
SMARCD1-208ENST00000550280 PDHXO00330 501 aa14.47□□□□□ -0.09
SMARCD1-208ENST00000550280 CIAO1O76071 339 aa14.47□□□□□ -0.09
SMARCD1-208ENST00000550280 OSBPP22059 807 aa14.47□□□□□ -0.09
SMARCD1-208ENST00000550280 ALDH1L2Q3SY69 923 aa14.47□□□□□ -0.09
SMARCD1-208ENST00000550280 HOOK2Q96ED9 719 aa14.47□□□□□ -0.09
SMARCD1-208ENST00000550280 GAKO14976 1311 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 BCRP11274 1271 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 PSMC4P43686 418 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 SLC4A8Q2Y0W8 1093 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 NBPF11Q86T75 865 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 ZNF384Q8TF68 577 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 DDX4Q9NQI0 724 aaKnown RBP14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 SMC4Q9NTJ3 1288 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 USP40Q9NVE5 1235 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 SRRDQ9UH36 339 aa14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 COLQQ9Y215 455 aaPredicted RBP14.46□□□□□ -0.09
SMARCD1-208ENST00000550280 MYH13Q9UKX3 1938 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 ZBTB22O15209 634 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 LDHBP07195 334 aaKnown RBP14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 CYP2C8P10632 490 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 ARHGEF6Q15052 776 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 UBE2Q1Q7Z7E8 422 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 MEIS3Q99687 375 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 IDI2Q9BXS1 227 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 FBXO3Q9UK99 471 aa14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 LRRFIP2Q9Y608 721 aaKnown RBP14.45□□□□□ -0.1
SMARCD1-208ENST00000550280 SZT2Q5T011 3432 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 RANBP2P49792 3224 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 DDTLA6NHG4 134 aaPredicted RBP14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 H0YGN5 161 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 GNRH1P01148 92 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 UBTFL1P0CB47 393 aaPredicted RBP14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 RGS3P49796 1198 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 MAP3K10Q02779 954 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 RASGRF1Q13972 1273 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 KIF22Q14807 665 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 CCDC102BQ68D86 513 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 CEP126Q9P2H0 1117 aa14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 NOB1Q9ULX3 412 aaKnown RBP14.44□□□□□ -0.1
SMARCD1-208ENST00000550280 WDHD1O75717 1129 aaPredicted RBP14.43□□□□□ -0.1
SMARCD1-208ENST00000550280 PRMT2P55345 433 aa14.43□□□□□ -0.1
SMARCD1-208ENST00000550280 PRKCZQ05513 592 aa14.43□□□□□ -0.1
SMARCD1-208ENST00000550280 CCDC84Q86UT8 332 aaPredicted RBP14.43□□□□□ -0.1
SMARCD1-208ENST00000550280 COPRSQ9NQ92 184 aa14.43□□□□□ -0.1
SMARCD1-208ENST00000550280 DENND2AQ9ULE3 1009 aa14.43□□□□□ -0.1
SMARCD1-208ENST00000550280 GABRQQ9UN88 632 aa14.43□□□□□ -0.1
SMARCD1-208ENST00000550280 A0A0G2JLL6 359 aaPredicted RBP14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 CXCL11O14625 94 aa14.42□□□□□ -0.1
SMARCD1-208ENST00000550280 SEMA3EO15041 775 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms