RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 GPR108Q9NPR9 543 aa12.05□□□□□ -0.48
HDAC7-229ENST00000549883 NDUFB9Q9Y6M9 179 aa12.05□□□□□ -0.48
HDAC7-229ENST00000549883 PDS5AQ29RF7 1337 aaKnown RBP12.05□□□□□ -0.48
HDAC7-229ENST00000549883 SLURP2P0DP57 97 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 GJA5P36382 358 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 MECOMQ03112 1051 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 TCP10Q12799 353 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 TNFAIP1Q13829 316 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 MAP3K11Q16584 847 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 SUPT20HL1Q3ZLR7 823 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 FAM198AQ9UFP1 575 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 GAKO14976 1311 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 CDK5RAP2Q96SN8 1893 aa12.04□□□□□ -0.48
HDAC7-229ENST00000549883 ZAP70P43403 619 aa12.03□□□□□ -0.48
HDAC7-229ENST00000549883 TTC39AQ5SRH9 613 aa12.03□□□□□ -0.48
HDAC7-229ENST00000549883 AACSQ86V21 672 aa12.03□□□□□ -0.48
HDAC7-229ENST00000549883 DZIP1Q86YF9 867 aaKnown RBP12.03□□□□□ -0.48
HDAC7-229ENST00000549883 RPAP2Q8IXW5 612 aaPredicted RBP12.03□□□□□ -0.48
HDAC7-229ENST00000549883 RHPN1Q8TCX5 695 aa12.03□□□□□ -0.48
HDAC7-229ENST00000549883 CNKSR2Q8WXI2 1034 aa12.03□□□□□ -0.48
HDAC7-229ENST00000549883 PIH1D3Q9NQM4 214 aaKnown RBP12.03□□□□□ -0.48
HDAC7-229ENST00000549883 USP40Q9NVE5 1235 aa12.03□□□□□ -0.48
HDAC7-229ENST00000549883 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
HDAC7-229ENST00000549883 LAMB1P07942 1786 aa12.02□□□□□ -0.48
HDAC7-229ENST00000549883 PPP1R12BO60237 982 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-229ENST00000549883 TRPA1O75762 1119 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 CYP2E1P05181 493 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-229ENST00000549883 UQCRFS1P1P0C7P4 283 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 TNNI2P48788 182 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 SPRYD7Q5W111 196 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.02□□□□□ -0.49
HDAC7-229ENST00000549883 ERICH6Q7L0X2 663 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 MIGA2Q7L4E1 593 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 NSUN4Q96CB9 384 aaKnown RBP12.02□□□□□ -0.49
HDAC7-229ENST00000549883 SLC10A4Q96EP9 437 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 BEGAINQ9BUH8 593 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 DDX4Q9NQI0 724 aaKnown RBP12.02□□□□□ -0.49
HDAC7-229ENST00000549883 PRDM10Q9NQV6 1147 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 TMOD2Q9NZR1 351 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 RAI14Q9P0K7 980 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 MAST2Q6P0Q8 1798 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 DOCK2Q92608 1830 aa12.02□□□□□ -0.49
HDAC7-229ENST00000549883 BTDP43251 543 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 RGS3P49796 1198 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 RRP1P56182 461 aaKnown RBP12.01□□□□□ -0.49
HDAC7-229ENST00000549883 RHBDL3P58872 404 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 CCDC158Q5M9N0 1113 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 FKBP1CQ5VVH2 108 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 SH3BP5LQ7L8J4 393 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 ADGRA1Q86SQ6 560 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 FAM83AQ86UY5 434 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 TNS4Q8IZW8 715 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 ZGPATQ8N5A5 531 aaKnown RBP12.01□□□□□ -0.49
HDAC7-229ENST00000549883 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.01□□□□□ -0.49
HDAC7-229ENST00000549883 WNK4Q96J92 1243 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 ANTXR1Q9H6X2 564 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 ELP3Q9H9T3 547 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 MROH7-TTC4A0A0A0MT08 1334 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 RFX7Q2KHR2 1363 aa12.01□□□□□ -0.49
HDAC7-229ENST00000549883 GPR75-ASB3A0A0A6YYF3 556 aa12□□□□□ -0.49
HDAC7-229ENST00000549883 SMARCA5O60264 1052 aaPredicted RBP12□□□□□ -0.49
HDAC7-229ENST00000549883 WDHD1O75717 1129 aaPredicted RBP12□□□□□ -0.49
HDAC7-229ENST00000549883 IREB2P48200 963 aaKnown RBP12□□□□□ -0.49
HDAC7-229ENST00000549883 VGLL4Q14135 290 aa12□□□□□ -0.49
HDAC7-229ENST00000549883 SPTY2D1Q68D10 685 aaPredicted RBP12□□□□□ -0.49
HDAC7-229ENST00000549883 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
HDAC7-229ENST00000549883 FAM151AQ8WW52 585 aa12□□□□□ -0.49
HDAC7-229ENST00000549883 FAM163AQ96GL9 167 aaPredicted RBP12□□□□□ -0.49
HDAC7-229ENST00000549883 ZNF512BQ96KM6 892 aaPredicted RBP12□□□□□ -0.49
HDAC7-229ENST00000549883 R3HDMLQ9H3Y0 253 aa12□□□□□ -0.49
HDAC7-229ENST00000549883 LRP2BPQ9P2M1 347 aa12□□□□□ -0.49
HDAC7-229ENST00000549883 PCDHB15Q9Y5E8 787 aa12□□□□□ -0.49
HDAC7-229ENST00000549883 DDTLA6NHG4 134 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-229ENST00000549883 HMMRO75330 724 aa11.99□□□□□ -0.49
HDAC7-229ENST00000549883 INPP5BP32019 993 aa11.99□□□□□ -0.49
HDAC7-229ENST00000549883 ERC1Q8IUD2 1116 aa11.99□□□□□ -0.49
HDAC7-229ENST00000549883 ANKRD13AQ8IZ07 590 aa11.99□□□□□ -0.49
HDAC7-229ENST00000549883 ZKSCAN4Q969J2 545 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-229ENST00000549883 CRBNQ96SW2 442 aa11.99□□□□□ -0.49
HDAC7-229ENST00000549883 RPAP1Q9BWH6 1393 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-229ENST00000549883 SIPA1L1O43166 1804 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 FOCADQ5VW36 1801 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 ATRNL1Q5VV63 1379 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 TBC1D8O95759 1140 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 TM4SF4P48230 202 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 MAP3K9P80192 1104 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 PICALMQ13492 652 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 IFFO2Q5TF58 517 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 SH3RF3Q8TEJ3 882 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-229ENST00000549883 OPTNQ96CV9 577 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 KIF1BPQ96EK5 621 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 EDC3Q96F86 508 aaKnown RBP11.98□□□□□ -0.49
HDAC7-229ENST00000549883 WRNIP1Q96S55 665 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 IDI2Q9BXS1 227 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 SNCAIPQ9Y6H5 919 aa11.98□□□□□ -0.49
HDAC7-229ENST00000549883 FAM196BA6NMK8 535 aa11.97□□□□□ -0.49
HDAC7-229ENST00000549883 IGF2BP3O00425 579 aaKnown RBP eCLIP11.97□□□□□ -0.49
HDAC7-229ENST00000549883 CA12O43570 354 aa11.97□□□□□ -0.49
HDAC7-229ENST00000549883 CAPN15O75808 1086 aa11.97□□□□□ -0.49
HDAC7-229ENST00000549883 DYNLL1P63167 89 aaKnown RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms