RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
TROAP-210ENST00000549534 SLC45A1Q9Y2W3 748 aa13.82□□□□□ -0.2
TROAP-210ENST00000549534 LTBP2Q14767 1821 aa13.82□□□□□ -0.2
TROAP-210ENST00000549534 ZDBF2Q9HCK1 2354 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 ERC2O15083 957 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 RGS20O76081 388 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 RBM5P52756 815 aaKnown RBP eCLIP13.81□□□□□ -0.2
TROAP-210ENST00000549534 DCTN1Q14203 1278 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 ADGRE1Q14246 886 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 CERS5Q8N5B7 392 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 SENP6Q9GZR1 1112 aaPredicted RBP13.81□□□□□ -0.2
TROAP-210ENST00000549534 TMEM39BQ9GZU3 492 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 AOX1Q06278 1338 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 MAST2Q6P0Q8 1798 aa13.81□□□□□ -0.2
TROAP-210ENST00000549534 TCF20Q9UGU0 1960 aaKnown RBP13.8□□□□□ -0.2
TROAP-210ENST00000549534 CXCL11O14625 94 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 ITGB8P26012 769 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 TFF2Q03403 129 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 TRIM32Q13049 653 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 LHX8Q68G74 356 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 FASTKD5Q7L8L6 764 aaKnown RBP13.8□□□□□ -0.2
TROAP-210ENST00000549534 TXNRD3Q86VQ6 643 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 KHSRPQ92945 711 aaKnown RBP eCLIP13.8□□□□□ -0.2
TROAP-210ENST00000549534 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 KNSTRNQ9Y448 316 aa13.8□□□□□ -0.2
TROAP-210ENST00000549534 PRKAR2AP13861 404 aaKnown RBP13.79□□□□□ -0.2
TROAP-210ENST00000549534 IGFBP4P22692 258 aa13.79□□□□□ -0.2
TROAP-210ENST00000549534 RTP1P59025 263 aa13.79□□□□□ -0.2
TROAP-210ENST00000549534 AIMP1Q12904 312 aaKnown RBP13.79□□□□□ -0.2
TROAP-210ENST00000549534 TRIM28Q13263 835 aaKnown RBP13.79□□□□□ -0.2
TROAP-210ENST00000549534 XAGE3Q8WTP9 111 aa13.79□□□□□ -0.2
TROAP-210ENST00000549534 HERVK_113Q902F9 699 aa13.79□□□□□ -0.2
TROAP-210ENST00000549534 MINPP1Q9UNW1 487 aa13.79□□□□□ -0.2
TROAP-210ENST00000549534 PKD1L2Q7Z442 2459 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 F8W031 263 aaPredicted RBP13.78□□□□□ -0.2
TROAP-210ENST00000549534 TLL1O43897 1013 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 PROSER3Q2NL68 480 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 DCAF15Q66K64 600 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 SMCR8Q8TEV9 937 aaPredicted RBP13.78□□□□□ -0.2
TROAP-210ENST00000549534 TRIB2Q92519 343 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 UIMC1Q96RL1 719 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 CDC5LQ99459 802 aaKnown RBP13.78□□□□□ -0.2
TROAP-210ENST00000549534 RSPH6AQ9H0K4 717 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 CD209Q9NNX6 404 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 BSDC1Q9NW68 430 aaPredicted RBP13.78□□□□□ -0.2
TROAP-210ENST00000549534 GJD2Q9UKL4 321 aa13.78□□□□□ -0.2
TROAP-210ENST00000549534 TCP10L2B9ZVM9 353 aa13.77□□□□□ -0.21
TROAP-210ENST00000549534 CACNA1GO43497 2377 aa13.77□□□□□ -0.21
TROAP-210ENST00000549534 CSPP1Q1MSJ5 1256 aa13.77□□□□□ -0.21
TROAP-210ENST00000549534 FAM110CQ1W6H9 321 aa13.77□□□□□ -0.21
TROAP-210ENST00000549534 TRMT44Q8IYL2 757 aaKnown RBP13.77□□□□□ -0.21
TROAP-210ENST00000549534 TDRD3Q9H7E2 651 aaKnown RBP13.77□□□□□ -0.21
TROAP-210ENST00000549534 SERPINA10Q9UK55 444 aa13.77□□□□□ -0.21
TROAP-210ENST00000549534 COG5Q9UP83 839 aa13.77□□□□□ -0.21
TROAP-210ENST00000549534 RPAP1Q9BWH6 1393 aaPredicted RBP13.76□□□□□ -0.21
TROAP-210ENST00000549534 ATN1P54259 1190 aaPredicted RBP13.76□□□□□ -0.21
TROAP-210ENST00000549534 RTL5Q5HYW3 569 aaPredicted RBP13.76□□□□□ -0.21
TROAP-210ENST00000549534 PLBD2Q8NHP8 589 aa13.76□□□□□ -0.21
TROAP-210ENST00000549534 ZNF428Q96B54 188 aa13.76□□□□□ -0.21
TROAP-210ENST00000549534 ZNF341Q9BYN7 854 aa13.76□□□□□ -0.21
TROAP-210ENST00000549534 PRDM5Q9NQX1 630 aaPredicted RBP13.76□□□□□ -0.21
TROAP-210ENST00000549534 ANXA1P04083 346 aa13.75□□□□□ -0.21
TROAP-210ENST00000549534 XRCC5P13010 732 aaKnown RBP13.75□□□□□ -0.21
TROAP-210ENST00000549534 ALADP13716 330 aa13.75□□□□□ -0.21
TROAP-210ENST00000549534 EIF2S2P20042 333 aaKnown RBP13.75□□□□□ -0.21
TROAP-210ENST00000549534 ATP11BQ9Y2G3 1177 aa13.75□□□□□ -0.21
TROAP-210ENST00000549534 CFAP54Q96N23 3096 aa13.75□□□□□ -0.21
TROAP-210ENST00000549534 CACNA1BQ00975 2339 aa13.74□□□□□ -0.21
TROAP-210ENST00000549534 USP34Q70CQ2 3546 aa13.74□□□□□ -0.21
TROAP-210ENST00000549534 DNAH12Q6ZR08 3092 aa13.74□□□□□ -0.21
TROAP-210ENST00000549534 PDE8AO60658 829 aa13.74□□□□□ -0.21
TROAP-210ENST00000549534 AMER1Q5JTC6 1135 aaPredicted RBP13.74□□□□□ -0.21
TROAP-210ENST00000549534 COL26A1Q96A83 441 aa13.74□□□□□ -0.21
TROAP-210ENST00000549534 ARAP2Q8WZ64 1704 aa13.73□□□□□ -0.21
TROAP-210ENST00000549534 ATP5J2-PTCD1G3V325 749 aa13.73□□□□□ -0.21
TROAP-210ENST00000549534 DNM1LO00429 736 aa13.73□□□□□ -0.21
TROAP-210ENST00000549534 DZIP1LQ8IYY4 767 aaKnown RBP13.73□□□□□ -0.21
TROAP-210ENST00000549534 ANKRD13CQ8N6S4 541 aa13.73□□□□□ -0.21
TROAP-210ENST00000549534 PBX4Q9BYU1 374 aa13.73□□□□□ -0.21
TROAP-210ENST00000549534 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
TROAP-210ENST00000549534 PDLIM7Q9NR12 457 aa13.73□□□□□ -0.21
TROAP-210ENST00000549534 A0A0G2JLL6 359 aaPredicted RBP13.72□□□□□ -0.21
TROAP-210ENST00000549534 INPP5BP32019 993 aa13.72□□□□□ -0.21
TROAP-210ENST00000549534 CACNB2Q08289 660 aaPredicted RBP13.72□□□□□ -0.21
TROAP-210ENST00000549534 NOL9Q5SY16 702 aaKnown RBP13.72□□□□□ -0.21
TROAP-210ENST00000549534 PRRT2Q7Z6L0 340 aaPredicted RBP13.72□□□□□ -0.21
TROAP-210ENST00000549534 FAM83AQ86UY5 434 aa13.72□□□□□ -0.21
TROAP-210ENST00000549534 ZNF112Q9UJU3 913 aa13.72□□□□□ -0.21
TROAP-210ENST00000549534 WDFY4Q6ZS81 3184 aa13.71□□□□□ -0.21
TROAP-210ENST00000549534 MSCO60682 206 aa13.71□□□□□ -0.21
TROAP-210ENST00000549534 KRT37O76014 449 aa13.71□□□□□ -0.21
TROAP-210ENST00000549534 KLRK1P26718 216 aa13.71□□□□□ -0.21
TROAP-210ENST00000549534 EPHB4P54760 987 aa13.71□□□□□ -0.21
TROAP-210ENST00000549534 SNX17Q15036 470 aa13.71□□□□□ -0.21
TROAP-210ENST00000549534 SKIV2LQ15477 1246 aaKnown RBP13.71□□□□□ -0.21
TROAP-210ENST00000549534 SLC39A5Q6ZMH5 540 aa13.71□□□□□ -0.21
TROAP-210ENST00000549534 MYBBP1AQ9BQG0 1328 aaKnown RBP13.7□□□□□ -0.22
TROAP-210ENST00000549534 TRIM43BA6NCK2 446 aa13.7□□□□□ -0.22
TROAP-210ENST00000549534 IL1R1P14778 569 aa13.7□□□□□ -0.22
TROAP-210ENST00000549534 ZKSCAN1P17029 563 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms