RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 STOX1Q6ZVD7 989 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 LARGE2Q8N3Y3 721 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 SDR42E1Q8WUS8 393 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 TTC14Q96N46 770 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 MXD3Q9BW11 206 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 VPS33BQ9H267 617 aa14.35□□□□□ -0.11
PTPRR-209ENST00000549308 ZNF277Q9NRM2 450 aaPredicted RBP14.35□□□□□ -0.11
PTPRR-209ENST00000549308 USP17L3A6NCW0 530 aa14.34□□□□□ -0.11
PTPRR-209ENST00000549308 USP17L4A6NCW7 530 aa14.34□□□□□ -0.11
PTPRR-209ENST00000549308 HSP90AA1P07900 732 aaKnown RBP14.34□□□□□ -0.11
PTPRR-209ENST00000549308 STRIP1Q5VSL9 837 aa14.34□□□□□ -0.11
PTPRR-209ENST00000549308 USP17L1Q7RTZ2 530 aa14.34□□□□□ -0.11
PTPRR-209ENST00000549308 CERS5Q8N5B7 392 aa14.34□□□□□ -0.11
PTPRR-209ENST00000549308 NLGN2Q8NFZ4 835 aa14.34□□□□□ -0.11
PTPRR-209ENST00000549308 KCNQ5Q9NR82 932 aa14.34□□□□□ -0.11
PTPRR-209ENST00000549308 HMGB1P09429 215 aaKnown RBP14.33□□□□□ -0.11
PTPRR-209ENST00000549308 BTDP43251 543 aa14.33□□□□□ -0.11
PTPRR-209ENST00000549308 AK2P54819 239 aa14.33□□□□□ -0.11
PTPRR-209ENST00000549308 FKBP1AP62942 108 aaKnown RBP14.33□□□□□ -0.11
PTPRR-209ENST00000549308 TTF2Q9UNY4 1162 aaKnown RBP14.33□□□□□ -0.11
PTPRR-209ENST00000549308 IARSP41252 1262 aaKnown RBP14.33□□□□□ -0.12
PTPRR-209ENST00000549308 USP5P45974 858 aa14.33□□□□□ -0.12
PTPRR-209ENST00000549308 PPP4CP60510 307 aa14.33□□□□□ -0.12
PTPRR-209ENST00000549308 DACT2Q5SW24 774 aa14.33□□□□□ -0.12
PTPRR-209ENST00000549308 GIMAP6Q6P9H5 292 aa14.33□□□□□ -0.12
PTPRR-209ENST00000549308 CERS3Q8IU89 383 aa14.33□□□□□ -0.12
PTPRR-209ENST00000549308 SH3RF3Q8TEJ3 882 aaPredicted RBP14.33□□□□□ -0.12
PTPRR-209ENST00000549308 TAOK3Q9H2K8 898 aa14.33□□□□□ -0.12
PTPRR-209ENST00000549308 GAKO14976 1311 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 SCN9AQ15858 1988 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 GPR75-ASB3A0A0A6YYF3 556 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 TRDNQ13061 729 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 RALYLQ86SE5 291 aaKnown RBP14.32□□□□□ -0.12
PTPRR-209ENST00000549308 NIM1KQ8IY84 436 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 NCOA7Q8NI08 942 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 FAM163AQ96GL9 167 aaPredicted RBP14.32□□□□□ -0.12
PTPRR-209ENST00000549308 TCEANC2Q96MN5 208 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 SLKQ9H2G2 1235 aaPredicted RBP14.32□□□□□ -0.12
PTPRR-209ENST00000549308 ATP8A2Q9NTI2 1148 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 FOXD4L1Q9NU39 408 aa14.32□□□□□ -0.12
PTPRR-209ENST00000549308 FER1L6Q2WGJ9 1857 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 ZNF646O15015 1829 aaPredicted RBP14.31□□□□□ -0.12
PTPRR-209ENST00000549308 YDJCA8MPS7 323 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 MINDY4BA8MYZ0 360 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 PLCG2P16885 1265 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 SCNN1DP51172 638 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 CTDSPL2Q05D32 466 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 ANKRD1Q15327 319 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 DHX32Q7L7V1 743 aaKnown RBP14.31□□□□□ -0.12
PTPRR-209ENST00000549308 TBC1D10CQ8IV04 446 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 TMX3Q96JJ7 454 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 LIMCH1Q9UPQ0 1083 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 DAGLAQ9Y4D2 1042 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 TIAM2Q8IVF5 1701 aa14.31□□□□□ -0.12
PTPRR-209ENST00000549308 FGD1P98174 961 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 PPARAQ07869 468 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 COL9A3Q14050 684 aaPredicted RBP14.3□□□□□ -0.12
PTPRR-209ENST00000549308 Q6ZUG5 572 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 KIAA0825Q8IV33 1275 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 TEX11Q8IYF3 940 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 LARP6Q9BRS8 491 aaKnown RBP14.3□□□□□ -0.12
PTPRR-209ENST00000549308 NBPF3Q9H094 633 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 ALDH8A1Q9H2A2 487 aaPredicted RBP14.3□□□□□ -0.12
PTPRR-209ENST00000549308 DCP1AQ9NPI6 582 aaPredicted RBP14.3□□□□□ -0.12
PTPRR-209ENST00000549308 PSME4Q14997 1843 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 ARFGEF1Q9Y6D6 1849 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 NFKBIEO00221 500 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 TEKT1Q969V4 418 aa14.3□□□□□ -0.12
PTPRR-209ENST00000549308 FHDC1Q9C0D6 1143 aaPredicted RBP14.3□□□□□ -0.12
PTPRR-209ENST00000549308 BAZ2AQ9UIF9 1905 aaKnown RBP14.29□□□□□ -0.12
PTPRR-209ENST00000549308 NAV1Q8NEY1 1877 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 USP17L12C9JPN9 530 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 USP17L21D6R901 530 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 RAD17O75943 681 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 MCM5P33992 734 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 AKNAD1Q5T1N1 836 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 CTR9Q6PD62 1173 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 HHIPL2Q6UWX4 724 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 MFSD6Q6ZSS7 791 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 STK11IPQ8N1F8 1099 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 TGFBRAP1Q8WUH2 860 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 STAG1Q8WVM7 1258 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 ZSCAN31Q96LW9 406 aaPredicted RBP14.29□□□□□ -0.12
PTPRR-209ENST00000549308 LRRC2Q9BYS8 371 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 RNF41Q9H4P4 317 aaPredicted RBP14.29□□□□□ -0.12
PTPRR-209ENST00000549308 CNNM2Q9H8M5 875 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 TOMM22Q9NS69 142 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 ARPP21Q9UBL0 812 aaPredicted RBP14.29□□□□□ -0.12
PTPRR-209ENST00000549308 ANAPC4Q9UJX5 808 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 ZNRF3Q9ULT6 936 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 LAMB1P07942 1786 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 COL4A5P29400 1685 aa14.29□□□□□ -0.12
PTPRR-209ENST00000549308 MYO3BQ8WXR4 1341 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 CRKP46108 304 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 RBM5P52756 815 aaKnown RBP eCLIP14.28□□□□□ -0.12
PTPRR-209ENST00000549308 EXOSC10Q01780 885 aaKnown RBP14.28□□□□□ -0.12
PTPRR-209ENST00000549308 RASSF7Q02833 373 aa14.28□□□□□ -0.12
PTPRR-209ENST00000549308 TOB2Q14106 344 aaPredicted RBP14.28□□□□□ -0.12
PTPRR-209ENST00000549308 RSBN1LQ6PCB5 846 aaPredicted RBP14.28□□□□□ -0.12
PTPRR-209ENST00000549308 CHST3Q7LGC8 479 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms