RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 TATDN1Q6P1N9 297 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 BTNL9Q6UXG8 535 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 RTKN2Q8IZC4 609 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 MBOAT7Q96N66 472 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 KIAA2012Q0VF49 1180 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 CT47A1Q5JQC4 288 aaPredicted RBP5.95□□□□□ -1.46
SCAF11-212ENST00000549162 ZDHHC15Q96MV8 337 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 SH3GLB2Q9NR46 395 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 ISY1Q9ULR0 285 aaKnown RBP5.95□□□□□ -1.46
SCAF11-212ENST00000549162 ADAMTS5Q9UNA0 930 aa5.95□□□□□ -1.46
SCAF11-212ENST00000549162 PNMA6EA0A0J9YXQ4 647 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 LIFRP42702 1097 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 CLK2P49760 499 aaKnown RBP5.94□□□□□ -1.46
SCAF11-212ENST00000549162 NBPF7P0C2Y1 421 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-212ENST00000549162 SCP2P22307 547 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 FBLN1P23142 703 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 KRT32Q14532 448 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 REM2Q8IYK8 340 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-212ENST00000549162 ESYT1Q9BSJ8 1104 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 VRTNQ9H8Y1 702 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 TCHHQ07283 1943 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 ADGRA2Q96PE1 1338 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 ESYT2A0FGR8 921 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 PAK3O75914 559 aaPredicted RBP5.94□□□□□ -1.46
SCAF11-212ENST00000549162 MX1P20591 662 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 MUTP22033 750 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 FKBP4Q02790 459 aaKnown RBP eCLIP5.94□□□□□ -1.46
SCAF11-212ENST00000549162 NFIXQ14938 502 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 VPS53Q5VIR6 699 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 STRIP1Q5VSL9 837 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 TTLL7Q6ZT98 887 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 PODNQ7Z5L7 613 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 MORC4Q8TE76 937 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 ELP1O95163 1332 aa5.94□□□□□ -1.46
SCAF11-212ENST00000549162 A0A0U1RQG5 324 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-212ENST00000549162 CNKSR1Q969H4 720 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 HLFQ16534 295 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 TRAPPC3LQ5T215 181 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 TBC1D9BQ66K14 1250 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 COL23A1Q86Y22 540 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-212ENST00000549162 ZNF274Q96GC6 653 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-212ENST00000549162 ATP8A2Q9NTI2 1148 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 CCNL1Q9UK58 526 aaPredicted RBP5.93□□□□□ -1.46
SCAF11-212ENST00000549162 ANKRD18BA2A2Z9 1011 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 M0R2N6 131 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 MOXD1Q6UVY6 613 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 TSC2P49815 1807 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 PAPLNO95428 1278 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 FDX1P10109 184 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 TPTE2Q6XPS3 522 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 RBM43Q6ZSC3 357 aaKnown RBP5.93□□□□□ -1.46
SCAF11-212ENST00000549162 NLRP7Q8WX94 980 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 DDX12PQ92771 950 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 MINPP1Q9UNW1 487 aa5.93□□□□□ -1.46
SCAF11-212ENST00000549162 SOCS7O14512 581 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 SPTY2D1Q68D10 685 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-212ENST00000549162 USHBP1Q8N6Y0 703 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 GMCL1P1Q8NEA9 526 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 APPBP2Q92624 585 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 GPATCH3Q96I76 525 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 DBNLQ9UJU6 430 aaKnown RBP5.92□□□□□ -1.46
SCAF11-212ENST00000549162 FNDC1Q4ZHG4 1894 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-212ENST00000549162 GSTO1P78417 241 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 DCTN1Q14203 1278 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 RABEP1Q15276 862 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 DNAJC14Q6Y2X3 702 aaPredicted RBP5.92□□□□□ -1.46
SCAF11-212ENST00000549162 WDR66Q8TBY9 1149 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 SWAP70Q9UH65 585 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 BRD2P25440 801 aaKnown RBP5.92□□□□□ -1.46
SCAF11-212ENST00000549162 AMIGO3Q86WK7 504 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 PPME1Q9Y570 386 aa5.92□□□□□ -1.46
SCAF11-212ENST00000549162 LRRFIP2Q9Y608 721 aaKnown RBP5.92□□□□□ -1.46
SCAF11-212ENST00000549162 BAG6P46379 1132 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 FKBP1BP68106 108 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 CRYGNQ8WXF5 182 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 SPATA32Q96LK8 384 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 PLCG2P16885 1265 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 ST5P78524 1137 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 ANKRD23Q86SG2 305 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 MB21D2Q8IYB1 491 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-212ENST00000549162 ZSCAN31Q96LW9 406 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-212ENST00000549162 PPP1R12CQ9BZL4 782 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 FAM217BQ9NTX9 383 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-212ENST00000549162 GNEQ9Y223 722 aaKnown RBP5.91□□□□□ -1.46
SCAF11-212ENST00000549162 MROH7-TTC4A0A0A0MT08 1334 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 PRAMEF22A3QJZ6 481 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 TAF5LO75529 589 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 TCF3P15923 654 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 ZNF16P17020 682 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-212ENST00000549162 SDSP20132 328 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 GALNT17Q6IS24 598 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 ZNF384Q8TF68 577 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 GTF3C2Q8WUA4 911 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-212ENST00000549162 SH2B1Q9NRF2 756 aaPredicted RBP5.91□□□□□ -1.46
SCAF11-212ENST00000549162 LIMD1Q9UGP4 676 aa5.91□□□□□ -1.46
SCAF11-212ENST00000549162 ANK1P16157 1881 aa5.9□□□□□ -1.46
SCAF11-212ENST00000549162 IRS4O14654 1257 aaPredicted RBP5.9□□□□□ -1.46
SCAF11-212ENST00000549162 MAP3K13O43283 966 aa5.9□□□□□ -1.46
SCAF11-212ENST00000549162 SLF2Q8IX21 1173 aa5.9□□□□□ -1.46
SCAF11-212ENST00000549162 EAF2Q96CJ1 260 aaPredicted RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms