RNA–Protein interactions for RNA: ENST00000548984.1

PFDN5-206, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-206ENST00000548984 SPATA5Q8NB90 893 aa12.58□□□□□ -0.4
PFDN5-206ENST00000548984 TMEM39BQ9GZU3 492 aa12.58□□□□□ -0.4
PFDN5-206ENST00000548984 RNF186Q9NXI6 227 aa12.58□□□□□ -0.4
PFDN5-206ENST00000548984 ABCF2Q9UG63 623 aa12.58□□□□□ -0.4
PFDN5-206ENST00000548984 TSKSQ9UJT2 592 aa12.58□□□□□ -0.4
PFDN5-206ENST00000548984 FPGT-TNNI3KV9GXZ4 949 aa12.58□□□□□ -0.4
PFDN5-206ENST00000548984 MYH2Q9UKX2 1941 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 USP2O75604 605 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-206ENST00000548984 TRPA1O75762 1119 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 ALDH1A1P00352 501 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 TM4SF4P48230 202 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 CACNB3P54284 484 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 INHBEP58166 350 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 GSTO1P78417 241 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 CCDC158Q5M9N0 1113 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 ERICH6Q7L0X2 663 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 FAM151AQ8WW52 585 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 FAM163AQ96GL9 167 aaPredicted RBP12.57□□□□□ -0.4
PFDN5-206ENST00000548984 WNK4Q96J92 1243 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 HMG20BQ9P0W2 317 aa12.57□□□□□ -0.4
PFDN5-206ENST00000548984 RFX7Q2KHR2 1363 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 HMMRO75330 724 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 MAP4K4O95819 1239 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-206ENST00000548984 PDE3AQ14432 1141 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 NOM1Q5C9Z4 860 aaKnown RBP12.56□□□□□ -0.4
PFDN5-206ENST00000548984 CDC42EP5Q6NZY7 148 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 RPAP2Q8IXW5 612 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-206ENST00000548984 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.41e-23■■□□□ 11.4
PFDN5-206ENST00000548984 CLMNQ96JQ2 1002 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 ZNF512BQ96KM6 892 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-206ENST00000548984 CFHR5Q9BXR6 569 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 FZD1Q9UP38 647 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 CSADQ9Y600 493 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.56□□□□□ -0.4
PFDN5-206ENST00000548984 MROH7-TTC4A0A0A0MT08 1334 aa12.56□□□□□ -0.4
PFDN5-206ENST00000548984 ENTPD3O75355 529 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 LDHCP07864 332 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 MAP3K9P80192 1104 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
PFDN5-206ENST00000548984 TTC39AQ5SRH9 613 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 CDAN1Q8IWY9 1227 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 IDI2Q9BXS1 227 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 USP40Q9NVE5 1235 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 DOCK2Q92608 1830 aa12.55□□□□□ -0.4
PFDN5-206ENST00000548984 MCAMP43121 646 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 BTDP43251 543 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 MECOMQ03112 1051 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 OTUD7BQ6GQQ9 843 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 DBNDD2Q9BQY9 259 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 ZNF341Q9BYN7 854 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 ZBTB40Q9NUA8 1239 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 COG6Q9Y2V7 657 aa12.54□□□□□ -0.4
PFDN5-206ENST00000548984 COL2A1P02458 1487 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-206ENST00000548984 CASP8AP2Q9UKL3 1982 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 GPR75-ASB3A0A0A6YYF3 556 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 SPDYE5A6NIY4 337 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 NPM3O75607 178 aaKnown RBP12.53□□□□□ -0.4
PFDN5-206ENST00000548984 NFIAQ12857 509 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 VGLL4Q14135 290 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 TMED8Q6PL24 325 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-206ENST00000548984 PI16Q6UXB8 463 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.53□□□□□ -0.4
PFDN5-206ENST00000548984 NSUN4Q96CB9 384 aaKnown RBP12.53□□□□□ -0.4
PFDN5-206ENST00000548984 OPTNQ96CV9 577 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 WRNIP1Q96S55 665 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 ELP3Q9H9T3 547 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 RAI14Q9P0K7 980 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 LRP2BPQ9P2M1 347 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 FAM198AQ9UFP1 575 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 DBNLQ9UJU6 430 aaKnown RBP12.53□□□□□ -0.4
PFDN5-206ENST00000548984 EXOC6BQ9Y2D4 811 aa12.53□□□□□ -0.4
PFDN5-206ENST00000548984 TESPA1A2RU30 521 aaPredicted RBP12.52□□□□□ -0.41
PFDN5-206ENST00000548984 RGS3P49796 1198 aa12.52□□□□□ -0.41
PFDN5-206ENST00000548984 IFNL1Q8IU54 200 aa12.52□□□□□ -0.41
PFDN5-206ENST00000548984 NOL10Q9BSC4 688 aaKnown RBP12.52□□□□□ -0.41
PFDN5-206ENST00000548984 SNCAIPQ9Y6H5 919 aa12.52□□□□□ -0.41
PFDN5-206ENST00000548984 RAB11FIP3O75154 756 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 PLCG2P16885 1265 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 GJA5P36382 358 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 GTF2A2P52657 109 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 TCP10Q12799 353 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 ERO1BQ86YB8 467 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 CLASRPQ8N2M8 674 aaKnown RBP12.51□□□□□ -0.41
PFDN5-206ENST00000548984 EAF2Q96CJ1 260 aaPredicted RBP12.51□□□□□ -0.41
PFDN5-206ENST00000548984 KIF1BPQ96EK5 621 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 ABHD8Q96I13 439 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 ZNF112Q9UJU3 913 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 ATRNL1Q5VV63 1379 aa12.51□□□□□ -0.41
PFDN5-206ENST00000548984 AK9Q5TCS8 1911 aa12.5□□□□□ -0.41
PFDN5-206ENST00000548984 WDHD1O75717 1129 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-206ENST00000548984 BAG3O95817 575 aa12.5□□□□□ -0.41
PFDN5-206ENST00000548984 RHBDL3P58872 404 aa12.5□□□□□ -0.41
PFDN5-206ENST00000548984 PPIL2Q13356 520 aa12.5□□□□□ -0.41
PFDN5-206ENST00000548984 DGKZQ13574 1117 aa12.5□□□□□ -0.41
PFDN5-206ENST00000548984 NOL9Q5SY16 702 aaKnown RBP12.5□□□□□ -0.41
PFDN5-206ENST00000548984 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
PFDN5-206ENST00000548984 TBC1D9Q6ZT07 1266 aa12.5□□□□□ -0.41
PFDN5-206ENST00000548984 CTU1Q7Z7A3 348 aaKnown RBP12.5□□□□□ -0.41
PFDN5-206ENST00000548984 AACSQ86V21 672 aa12.5□□□□□ -0.41
PFDN5-206ENST00000548984 CERS3Q8IU89 383 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms