RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 TBC1D9Q6ZT07 1266 aa6.14□□□□□ -1.43
APP-217ENST00000548570 FBXW7Q969H0 707 aa6.14□□□□□ -1.43
APP-217ENST00000548570 GMLQ99445 158 aa6.14□□□□□ -1.43
APP-217ENST00000548570 ZC3H12CQ9C0D7 883 aaKnown RBP6.14□□□□□ -1.43
APP-217ENST00000548570 COA1Q9GZY4 146 aa6.14□□□□□ -1.43
APP-217ENST00000548570 BCL11AQ9H165 835 aa6.14□□□□□ -1.43
APP-217ENST00000548570 VPS33BQ9H267 617 aa6.14□□□□□ -1.43
APP-217ENST00000548570 OSBPL3Q9H4L5 887 aa6.14□□□□□ -1.43
APP-217ENST00000548570 PIH1D3Q9NQM4 214 aaKnown RBP6.14□□□□□ -1.43
APP-217ENST00000548570 SNRKQ9NRH2 765 aa6.14□□□□□ -1.43
APP-217ENST00000548570 ECHDC1Q9NTX5 307 aa6.14□□□□□ -1.43
APP-217ENST00000548570 AOX1Q06278 1338 aa6.14□□□□□ -1.43
APP-217ENST00000548570 RAD17O75943 681 aa6.13□□□□□ -1.43
APP-217ENST00000548570 IFIT2P09913 472 aaKnown RBP6.13□□□□□ -1.43
APP-217ENST00000548570 ZAP70P43403 619 aa6.13□□□□□ -1.43
APP-217ENST00000548570 KCNJ4P48050 445 aa6.13□□□□□ -1.43
APP-217ENST00000548570 PODNQ7Z5L7 613 aa6.13□□□□□ -1.43
APP-217ENST00000548570 LARGE2Q8N3Y3 721 aa6.13□□□□□ -1.43
APP-217ENST00000548570 SPATA5Q8NB90 893 aa6.13□□□□□ -1.43
APP-217ENST00000548570 SUPT20HQ8NEM7 779 aa6.13□□□□□ -1.43
APP-217ENST00000548570 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.13□□□□□ -1.43
APP-217ENST00000548570 EYA3Q99504 573 aa6.13□□□□□ -1.43
APP-217ENST00000548570 HAUS7Q99871 368 aa6.13□□□□□ -1.43
APP-217ENST00000548570 BOLA2Q9H3K6 86 aa6.13□□□□□ -1.43
APP-217ENST00000548570 ZNRF3Q9ULT6 936 aa6.13□□□□□ -1.43
APP-217ENST00000548570 FAM205AQ6ZU69 1335 aa6.13□□□□□ -1.43
APP-217ENST00000548570 SOWAHBA6NEL2 793 aa6.12□□□□□ -1.43
APP-217ENST00000548570 POTECB2RU33 542 aa6.12□□□□□ -1.43
APP-217ENST00000548570 PSMD14O00487 310 aa6.12□□□□□ -1.43
APP-217ENST00000548570 GRIN3BO60391 1043 aa6.12□□□□□ -1.43
APP-217ENST00000548570 MAP4K4O95819 1239 aaPredicted RBP6.12□□□□□ -1.43
APP-217ENST00000548570 VIL1P09327 827 aaKnown RBP6.12□□□□□ -1.43
APP-217ENST00000548570 PRDX5P30044 214 aa6.12□□□□□ -1.43
APP-217ENST00000548570 GTF2IP78347 998 aa6.12□□□□□ -1.43
APP-217ENST00000548570 NBR1Q14596 966 aa6.12□□□□□ -1.43
APP-217ENST00000548570 PDS5AQ29RF7 1337 aaKnown RBP6.12□□□□□ -1.43
APP-217ENST00000548570 CAVIN4Q5BKX8 364 aa6.12□□□□□ -1.43
APP-217ENST00000548570 TTC22Q5TAA0 569 aa6.12□□□□□ -1.43
APP-217ENST00000548570 TTC41PQ6P2S7 1318 aa6.12□□□□□ -1.43
APP-217ENST00000548570 ZNF804AQ7Z570 1209 aa6.12□□□□□ -1.43
APP-217ENST00000548570 ADGRA1Q86SQ6 560 aa6.12□□□□□ -1.43
APP-217ENST00000548570 DDX27Q96GQ7 796 aaKnown RBP6.12□□□□□ -1.43
APP-217ENST00000548570 IL25Q9H293 177 aa6.12□□□□□ -1.43
APP-217ENST00000548570 RNF181Q9P0P0 153 aa6.12□□□□□ -1.43
APP-217ENST00000548570 PCDHAC2Q9Y5I4 1007 aa6.12□□□□□ -1.43
APP-217ENST00000548570 A0A1B0GUL6 1792 aa6.11□□□□□ -1.43
APP-217ENST00000548570 SALL1Q9NSC2 1324 aa6.11□□□□□ -1.43
APP-217ENST00000548570 TCRBV5S4A2TA0A5A2 114 aa6.11□□□□□ -1.43
APP-217ENST00000548570 USP17L3A6NCW0 530 aa6.11□□□□□ -1.43
APP-217ENST00000548570 USP17L4A6NCW7 530 aa6.11□□□□□ -1.43
APP-217ENST00000548570 GOLIM4O00461 696 aa6.11□□□□□ -1.43
APP-217ENST00000548570 SEMA3EO15041 775 aa6.11□□□□□ -1.43
APP-217ENST00000548570 DDNO94850 711 aaPredicted RBP6.11□□□□□ -1.43
APP-217ENST00000548570 EGFRP00533 1210 aa6.11□□□□□ -1.43
APP-217ENST00000548570 SDSP20132 328 aa6.11□□□□□ -1.43
APP-217ENST00000548570 RGS3P49796 1198 aa6.11□□□□□ -1.43
APP-217ENST00000548570 SCNN1DP51172 638 aa6.11□□□□□ -1.43
APP-217ENST00000548570 CHAF1AQ13111 956 aaPredicted RBP6.11□□□□□ -1.43
APP-217ENST00000548570 CCDC158Q5M9N0 1113 aa6.11□□□□□ -1.43
APP-217ENST00000548570 TTC39AQ5SRH9 613 aa6.11□□□□□ -1.43
APP-217ENST00000548570 STRIP1Q5VSL9 837 aa6.11□□□□□ -1.43
APP-217ENST00000548570 TTLL5Q6EMB2 1281 aa6.11□□□□□ -1.43
APP-217ENST00000548570 USP17L1Q7RTZ2 530 aa6.11□□□□□ -1.43
APP-217ENST00000548570 NIM1KQ8IY84 436 aa6.11□□□□□ -1.43
APP-217ENST00000548570 ZBED3Q96IU2 234 aaPredicted RBP6.11□□□□□ -1.43
APP-217ENST00000548570 TMX4Q9H1E5 349 aaPredicted RBP6.11□□□□□ -1.43
APP-217ENST00000548570 DENND2AQ9ULE3 1009 aa6.11□□□□□ -1.43
APP-217ENST00000548570 GLRX3O76003 335 aaKnown RBP6.1□□□□□ -1.43
APP-217ENST00000548570 UQCRFS1P1P0C7P4 283 aa6.1□□□□□ -1.43
APP-217ENST00000548570 GMPSP49915 693 aaPredicted RBP6.1□□□□□ -1.43
APP-217ENST00000548570 HIRAP54198 1017 aaPredicted RBP6.1□□□□□ -1.43
APP-217ENST00000548570 FKBP1AP62942 108 aaKnown RBP6.1□□□□□ -1.43
APP-217ENST00000548570 DIXDC1Q155Q3 683 aa6.1□□□□□ -1.43
APP-217ENST00000548570 MFSD14BQ5SR56 506 aa6.1□□□□□ -1.43
APP-217ENST00000548570 GORABQ5T7V8 394 aa6.1□□□□□ -1.43
APP-217ENST00000548570 CIAPIN1Q6FI81 312 aa6.1□□□□□ -1.43
APP-217ENST00000548570 TYW1BQ6NUM6 668 aa6.1□□□□□ -1.43
APP-217ENST00000548570 RSBN1LQ6PCB5 846 aaPredicted RBP6.1□□□□□ -1.43
APP-217ENST00000548570 NSUN4Q96CB9 384 aaKnown RBP6.1□□□□□ -1.43
APP-217ENST00000548570 ZFRQ96KR1 1074 aaKnown RBP6.1□□□□□ -1.43
APP-217ENST00000548570 SEC62Q99442 399 aaKnown RBP6.1□□□□□ -1.43
APP-217ENST00000548570 DNAJC2Q99543 621 aaKnown RBP6.1□□□□□ -1.43
APP-217ENST00000548570 LARP6Q9BRS8 491 aaKnown RBP6.1□□□□□ -1.43
APP-217ENST00000548570 PAG1Q9NWQ8 432 aa6.1□□□□□ -1.43
APP-217ENST00000548570 MYH3P11055 1940 aa6.09□□□□□ -1.43
APP-217ENST00000548570 FER1L6Q2WGJ9 1857 aa6.09□□□□□ -1.43
APP-217ENST00000548570 ASTN2O75129 1339 aaPredicted RBP6.09□□□□□ -1.43
APP-217ENST00000548570 ARAP2Q8WZ64 1704 aa6.09□□□□□ -1.43
APP-217ENST00000548570 GLTPD2A6NH11 291 aa6.09□□□□□ -1.43
APP-217ENST00000548570 FOXP2O15409 715 aa6.09□□□□□ -1.43
APP-217ENST00000548570 ZNF280AP59817 542 aaPredicted RBP6.09□□□□□ -1.43
APP-217ENST00000548570 MECOMQ03112 1051 aa6.09□□□□□ -1.43
APP-217ENST00000548570 BMP2KLQ5H9B9 411 aa6.09□□□□□ -1.43
APP-217ENST00000548570 APOBEC3HQ6NTF7 200 aaKnown RBP6.09□□□□□ -1.43
APP-217ENST00000548570 VPS37DQ86XT2 251 aa6.09□□□□□ -1.43
APP-217ENST00000548570 KIAA0825Q8IV33 1275 aa6.09□□□□□ -1.43
APP-217ENST00000548570 GPC2Q8N158 579 aa6.09□□□□□ -1.43
APP-217ENST00000548570 KBTBD3Q8NAB2 608 aa6.09□□□□□ -1.43
APP-217ENST00000548570 WDR66Q8TBY9 1149 aa6.09□□□□□ -1.43
APP-217ENST00000548570 JDP2Q8WYK2 163 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms