RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 IFIT1P09914 478 aaKnown RBP20.64■□□□□ 0.89
SSH1-208ENST00000548522 CTGFP29279 349 aa20.64■□□□□ 0.89
SSH1-208ENST00000548522 NFIAQ12857 509 aa20.64■□□□□ 0.89
SSH1-208ENST00000548522 HHIPL2Q6UWX4 724 aa20.64■□□□□ 0.89
SSH1-208ENST00000548522 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.64■□□□□ 0.89
SSH1-208ENST00000548522 MRIQ9BWK5 157 aa20.64■□□□□ 0.89
SSH1-208ENST00000548522 SUGT1Q9Y2Z0 365 aa20.64■□□□□ 0.89
SSH1-208ENST00000548522 DAGLAQ9Y4D2 1042 aa20.64■□□□□ 0.89
SSH1-208ENST00000548522 RANBP2P49792 3224 aaKnown RBP20.64■□□□□ 0.89
SSH1-208ENST00000548522 SZT2Q5T011 3432 aa20.63■□□□□ 0.89
SSH1-208ENST00000548522 EYA2O00167 538 aa20.63■□□□□ 0.89
SSH1-208ENST00000548522 TCP10Q12799 353 aa20.63■□□□□ 0.89
SSH1-208ENST00000548522 ATG9AQ7Z3C6 839 aa20.63■□□□□ 0.89
SSH1-208ENST00000548522 PRDX5P30044 214 aa20.62■□□□□ 0.89
SSH1-208ENST00000548522 SLC4A8Q2Y0W8 1093 aa20.62■□□□□ 0.89
SSH1-208ENST00000548522 DCAF15Q66K64 600 aa20.62■□□□□ 0.89
SSH1-208ENST00000548522 CDC42EP5Q6NZY7 148 aa20.62■□□□□ 0.89
SSH1-208ENST00000548522 ZNF341Q9BYN7 854 aa20.62■□□□□ 0.89
SSH1-208ENST00000548522 CPA4Q9UI42 421 aa20.62■□□□□ 0.89
SSH1-208ENST00000548522 CEP290O15078 2479 aa20.61■□□□□ 0.89
SSH1-208ENST00000548522 SLC5A1P13866 664 aa20.61■□□□□ 0.89
SSH1-208ENST00000548522 ARHGEF6Q15052 776 aa20.61■□□□□ 0.89
SSH1-208ENST00000548522 NBPF11Q86T75 865 aa20.61■□□□□ 0.89
SSH1-208ENST00000548522 LPIN2Q92539 896 aa20.61■□□□□ 0.89
SSH1-208ENST00000548522 SIL1Q9H173 461 aa20.61■□□□□ 0.89
SSH1-208ENST00000548522 ZCCHC17Q9NP64 241 aaKnown RBP20.61■□□□□ 0.89
SSH1-208ENST00000548522 ADGRA2Q96PE1 1338 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 PPATQ06203 517 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 MOGSQ13724 837 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 C17orf99Q6UX52 265 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 WDR66Q8TBY9 1149 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 FAM151AQ8WW52 585 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 HOOK2Q96ED9 719 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 FAM198AQ9UFP1 575 aa20.6■□□□□ 0.89
SSH1-208ENST00000548522 ZFPM1Q8IX07 1006 aa20.59■□□□□ 0.89
SSH1-208ENST00000548522 TRIM47Q96LD4 638 aa20.59■□□□□ 0.89
SSH1-208ENST00000548522 PDHXO00330 501 aa20.58■□□□□ 0.89
SSH1-208ENST00000548522 WDHD1O75717 1129 aaPredicted RBP20.58■□□□□ 0.89
SSH1-208ENST00000548522 FXR1P51114 621 aaKnown RBP eCLIP20.58■□□□□ 0.89
SSH1-208ENST00000548522 KIF22Q14807 665 aa20.58■□□□□ 0.89
SSH1-208ENST00000548522 MTFR1Q15390 333 aa20.58■□□□□ 0.89
SSH1-208ENST00000548522 SHISA4Q96DD7 197 aa20.58■□□□□ 0.89
SSH1-208ENST00000548522 ZNF112Q9UJU3 913 aa20.58■□□□□ 0.89
SSH1-208ENST00000548522 KCNH4Q9UQ05 1017 aa20.58■□□□□ 0.89
SSH1-208ENST00000548522 ATRNL1Q5VV63 1379 aa20.58■□□□□ 0.88
SSH1-208ENST00000548522 MYH13Q9UKX3 1938 aa20.57■□□□□ 0.88
SSH1-208ENST00000548522 E9PSI1 815 aa20.57■□□□□ 0.88
SSH1-208ENST00000548522 ATP2B3Q16720 1220 aa20.57■□□□□ 0.88
SSH1-208ENST00000548522 ANKRD23Q86SG2 305 aa20.57■□□□□ 0.88
SSH1-208ENST00000548522 COLQQ9Y215 455 aaPredicted RBP20.57■□□□□ 0.88
SSH1-208ENST00000548522 SLURP2P0DP57 97 aa20.56■□□□□ 0.88
SSH1-208ENST00000548522 PSMC4P43686 418 aa20.56■□□□□ 0.88
SSH1-208ENST00000548522 PHKA1P46020 1223 aa20.56■□□□□ 0.88
SSH1-208ENST00000548522 CDCA7LQ96GN5 454 aa20.56■□□□□ 0.88
SSH1-208ENST00000548522 PA2G4Q9UQ80 394 aaKnown RBP20.56■□□□□ 0.88
SSH1-208ENST00000548522 H0YGN5 161 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 LDHBP07195 334 aaKnown RBP20.55■□□□□ 0.88
SSH1-208ENST00000548522 OSBPP22059 807 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 ADORA1P30542 326 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 SLFN5Q08AF3 891 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 NOL9Q5SY16 702 aaKnown RBP20.55■□□□□ 0.88
SSH1-208ENST00000548522 SMC4Q9NTJ3 1288 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 USP40Q9NVE5 1235 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 SRRDQ9UH36 339 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 RFX7Q2KHR2 1363 aa20.55■□□□□ 0.88
SSH1-208ENST00000548522 TRIOBPQ9H2D6 2365 aa20.54■□□□□ 0.88
SSH1-208ENST00000548522 CYP2C8P10632 490 aa20.54■□□□□ 0.88
SSH1-208ENST00000548522 GPAT2Q6NUI2 795 aa20.54■□□□□ 0.88
SSH1-208ENST00000548522 CIAO1O76071 339 aa20.53■□□□□ 0.88
SSH1-208ENST00000548522 GNRH1P01148 92 aa20.53■□□□□ 0.88
SSH1-208ENST00000548522 UBTFL1P0CB47 393 aaPredicted RBP20.53■□□□□ 0.88
SSH1-208ENST00000548522 SH3BP5LQ7L8J4 393 aa20.53■□□□□ 0.88
SSH1-208ENST00000548522 LRRFIP2Q9Y608 721 aaKnown RBP20.53■□□□□ 0.88
SSH1-208ENST00000548522 MYPNQ86TC9 1320 aa20.53■□□□□ 0.88
SSH1-208ENST00000548522 SALL1Q9NSC2 1324 aa20.53■□□□□ 0.88
SSH1-208ENST00000548522 PHF20L1A8MW92 1017 aa20.52■□□□□ 0.88
SSH1-208ENST00000548522 FMNL1O95466 1100 aaPredicted RBP20.52■□□□□ 0.88
SSH1-208ENST00000548522 RGS3P49796 1198 aa20.52■□□□□ 0.88
SSH1-208ENST00000548522 PRMT2P55345 433 aa20.52■□□□□ 0.88
SSH1-208ENST00000548522 PRKCZQ05513 592 aa20.52■□□□□ 0.88
SSH1-208ENST00000548522 CEP126Q9P2H0 1117 aa20.52■□□□□ 0.88
SSH1-208ENST00000548522 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.52■□□□□ 0.88
SSH1-208ENST00000548522 BCRP11274 1271 aa20.51■□□□□ 0.87
SSH1-208ENST00000548522 ALDH1L2Q3SY69 923 aa20.51■□□□□ 0.87
SSH1-208ENST00000548522 RAET1EQ8TD07 263 aa20.51■□□□□ 0.87
SSH1-208ENST00000548522 GRK4P32298 578 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 RASGRF1Q13972 1273 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 CCDC102BQ68D86 513 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 PARK7Q99497 189 aaKnown RBP20.5■□□□□ 0.87
SSH1-208ENST00000548522 DDX4Q9NQI0 724 aaKnown RBP20.5■□□□□ 0.87
SSH1-208ENST00000548522 GNL3LQ9NVN8 582 aaKnown RBP20.5■□□□□ 0.87
SSH1-208ENST00000548522 DENND2AQ9ULE3 1009 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 ZHX2Q9Y6X8 837 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 LAMA3Q16787 3333 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 DOCK2Q92608 1830 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 GAKO14976 1311 aa20.5■□□□□ 0.87
SSH1-208ENST00000548522 CCL5P13501 91 aa20.49■□□□□ 0.87
SSH1-208ENST00000548522 IL15P40933 162 aaPredicted RBP20.49■□□□□ 0.87
SSH1-208ENST00000548522 CCDC84Q86UT8 332 aaPredicted RBP20.49■□□□□ 0.87
SSH1-208ENST00000548522 SCYL3Q8IZE3 742 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms