RNA–Protein interactions for RNA: ENST00000548379.5

PTCH1-216, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 548 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-216ENST00000548379 SLC7A3Q8WY07 619 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 CARD10Q9BWT7 1032 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 MIR1-1HGQ9H1L0 117 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 ENAMQ9NRM1 1142 aa6.48□□□□□ -1.37
PTCH1-216ENST00000548379 DLL1O00548 723 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 ECEL1O95672 775 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 COL9A2Q14055 689 aaPredicted RBP6.47□□□□□ -1.37
PTCH1-216ENST00000548379 SEPT6Q14141 434 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 POU4F3Q15319 338 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 FOXD4L6Q3SYB3 417 aaPredicted RBP6.47□□□□□ -1.37
PTCH1-216ENST00000548379 FOXD4L3Q6VB84 417 aaPredicted RBP6.47□□□□□ -1.37
PTCH1-216ENST00000548379 ARMC5Q96C12 935 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 TANGO6Q9C0B7 1094 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 UBP1Q9NZI7 540 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 USP35Q9P2H5 1018 aa6.47□□□□□ -1.37
PTCH1-216ENST00000548379 A0A0A0MRY4 1105 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 LOC100289279A0A1B0GTE1 492 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 MAOBP27338 520 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 SNRPNP63162 240 aaKnown RBP6.46□□□□□ -1.38
PTCH1-216ENST00000548379 MPP2Q14168 576 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 FBXO11Q86XK2 927 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 VPS37DQ86XT2 251 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 FMR1NBQ8N0W7 255 aaPredicted RBP6.46□□□□□ -1.38
PTCH1-216ENST00000548379 SVOPQ8N4V2 548 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 FBXO27Q8NI29 283 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 UBXN4Q92575 508 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 CCDC86Q9H6F5 360 aaKnown RBP6.46□□□□□ -1.38
PTCH1-216ENST00000548379 CBX8Q9HC52 389 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 KCNK4Q9NYG8 393 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 SYNGAP1Q96PV0 1343 aa6.46□□□□□ -1.38
PTCH1-216ENST00000548379 ZNF862O60290 1169 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 DLGAP3O95886 979 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 DNAJA1P31689 397 aaKnown RBP6.45□□□□□ -1.38
PTCH1-216ENST00000548379 CD68P34810 354 aaPredicted RBP6.45□□□□□ -1.38
PTCH1-216ENST00000548379 RPL6Q02878 288 aaKnown RBP6.45□□□□□ -1.38
PTCH1-216ENST00000548379 APOBRQ0VD83 1088 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 KIF4BQ2VIQ3 1234 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 NEDD1Q8NHV4 660 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 GPBAR1Q8TDU6 330 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 DCAF11Q8TEB1 546 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 CORO1BQ9BR76 489 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 GINM1Q9NU53 330 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 PCDHGC5Q9Y5F6 944 aa6.45□□□□□ -1.38
PTCH1-216ENST00000548379 DDX3YO15523 660 aaKnown RBP6.44□□□□□ -1.38
PTCH1-216ENST00000548379 ATP2B1P20020 1258 aa6.44□□□□□ -1.38
PTCH1-216ENST00000548379 TRAPPC3LQ5T215 181 aa6.44□□□□□ -1.38
PTCH1-216ENST00000548379 MAP1SQ66K74 1059 aaPredicted RBP6.44□□□□□ -1.38
PTCH1-216ENST00000548379 REC114Q7Z4M0 266 aa6.44□□□□□ -1.38
PTCH1-216ENST00000548379 KCNB2Q92953 911 aa6.44□□□□□ -1.38
PTCH1-216ENST00000548379 NKD1Q969G9 470 aa6.44□□□□□ -1.38
PTCH1-216ENST00000548379 EFR3BQ9Y2G0 817 aa6.44□□□□□ -1.38
PTCH1-216ENST00000548379 GFRA2O00451 464 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 GNB5O14775 395 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 LMNB1P20700 586 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 NASPP49321 788 aaPredicted RBP6.43□□□□□ -1.38
PTCH1-216ENST00000548379 NLRP12P59046 1061 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 RBL2Q08999 1139 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.43□□□□□ -1.38
PTCH1-216ENST00000548379 REXO1Q8N1G1 1221 aaKnown RBP6.43□□□□□ -1.38
PTCH1-216ENST00000548379 JARID2Q92833 1246 aaPredicted RBP6.43□□□□□ -1.38
PTCH1-216ENST00000548379 WDR89Q96FK6 387 aaPredicted RBP6.43□□□□□ -1.38
PTCH1-216ENST00000548379 PLVAPQ9BX97 442 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 RRAGCQ9HB90 399 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 STRIP2Q9ULQ0 834 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 PRR36Q9H6K5 1346 aa6.43□□□□□ -1.38
PTCH1-216ENST00000548379 MEGF11A6BM72 1044 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 RAC1P63000 192 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 SEZ6Q53EL9 994 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 HP1BP3Q5SSJ5 553 aaPredicted RBP6.42□□□□□ -1.38
PTCH1-216ENST00000548379 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTCH1-216ENST00000548379 WDR18Q9BV38 432 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 USP26Q9BXU7 913 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 TMPRSS13Q9BYE2 586 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 ZC3H12CQ9C0D7 883 aaKnown RBP6.42□□□□□ -1.38
PTCH1-216ENST00000548379 MKL2Q9ULH7 1088 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 POLR3KQ9Y2Y1 108 aaPredicted RBP6.42□□□□□ -1.38
PTCH1-216ENST00000548379 TACC3Q9Y6A5 838 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 SNCAIPQ9Y6H5 919 aa6.42□□□□□ -1.38
PTCH1-216ENST00000548379 PIK3R2O00459 728 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 TLR3O15455 904 aaKnown RBP6.41□□□□□ -1.38
PTCH1-216ENST00000548379 ATE1O95260 518 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 WISP1O95388 367 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 LIG1P18858 919 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 CDK8P49336 464 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 RING1Q06587 406 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 INPP5AQ14642 412 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 CWF19L2Q2TBE0 894 aaKnown RBP6.41□□□□□ -1.38
PTCH1-216ENST00000548379 ZC3H12AQ5D1E8 599 aaKnown RBP6.41□□□□□ -1.38
PTCH1-216ENST00000548379 EXOSC6Q5RKV6 272 aaKnown RBP6.41□□□□□ -1.38
PTCH1-216ENST00000548379 KIAA1211Q6ZU35 1233 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 CYFIP1Q7L576 1253 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 UBASH3BQ8TF42 649 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 EHMT1Q9H9B1 1298 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 BRMS1Q9HCU9 246 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 PCDHA4Q9UN74 947 aa6.41□□□□□ -1.38
PTCH1-216ENST00000548379 SPDYE3A6NKU9 549 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 AOC2O75106 756 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 BPNT1O95861 308 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 ELNP15502 786 aa6.4□□□□□ -1.38
PTCH1-216ENST00000548379 LRFN4Q6PJG9 635 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms