RNA–Protein interactions for RNA: ENST00000548220.1

PTPRR-207, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,374 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-207ENST00000548220 TTF1Q15361 905 aaPredicted RBP7.59□□□□□ -1.2
PTPRR-207ENST00000548220 GORABQ5T7V8 394 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 PPP1R18Q6NYC8 613 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 DPP8Q6V1X1 898 aaPredicted RBP7.59□□□□□ -1.2
PTPRR-207ENST00000548220 ZNF804AQ7Z570 1209 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 AACSQ86V21 672 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 PLEKHM2Q8IWE5 1019 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 TBC1D16Q8TBP0 767 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 XAGE2Q96GT9 111 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 CCDC85AQ96PX6 553 aaPredicted RBP7.59□□□□□ -1.2
PTPRR-207ENST00000548220 ZC3H12CQ9C0D7 883 aaKnown RBP7.59□□□□□ -1.2
PTPRR-207ENST00000548220 DBNLQ9UJU6 430 aaKnown RBP7.59□□□□□ -1.2
PTPRR-207ENST00000548220 NSFL1CQ9UNZ2 370 aaKnown RBP7.59□□□□□ -1.2
PTPRR-207ENST00000548220 SUGT1Q9Y2Z0 365 aa7.59□□□□□ -1.2
PTPRR-207ENST00000548220 AK9Q5TCS8 1911 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 MYH13Q9UKX3 1938 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 IRS2Q9Y4H2 1338 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 DUOX1Q9NRD9 1551 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 TESPA1A2RU30 521 aaPredicted RBP7.58□□□□□ -1.2
PTPRR-207ENST00000548220 GRIN3BO60391 1043 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 IL1R1P14778 569 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 HIBADHP31937 336 aaKnown RBP7.58□□□□□ -1.2
PTPRR-207ENST00000548220 GGCXP38435 758 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 FKBP4Q02790 459 aaKnown RBP eCLIP7.58□□□□□ -1.2
PTPRR-207ENST00000548220 KIAA2012Q0VF49 1180 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 NUDT18Q6ZVK8 323 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 ZGPATQ8N5A5 531 aaKnown RBP7.58□□□□□ -1.2
PTPRR-207ENST00000548220 FAM84BQ96KN1 310 aaPredicted RBP7.58□□□□□ -1.2
PTPRR-207ENST00000548220 HAUS7Q99871 368 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 COA1Q9GZY4 146 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.58□□□□□ -1.2
PTPRR-207ENST00000548220 DENND2AQ9ULE3 1009 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 SALL1Q9NSC2 1324 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 RFX7Q2KHR2 1363 aa7.58□□□□□ -1.2
PTPRR-207ENST00000548220 PSME4Q14997 1843 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 HIP1O00291 1037 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 EPB41L2O43491 1005 aaKnown RBP7.57□□□□□ -1.2
PTPRR-207ENST00000548220 UFL1O94874 794 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 GPSM2P81274 684 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 WASHC4Q2M389 1173 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 CCDC102BQ68D86 513 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 VPS37DQ86XT2 251 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 SLF2Q8IX21 1173 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 TDRD7Q8NHU6 1098 aaKnown RBP7.57□□□□□ -1.2
PTPRR-207ENST00000548220 WDR66Q8TBY9 1149 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 PI4K2BQ8TCG2 481 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 TBC1D22AQ8WUA7 517 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 EVI5LQ96CN4 794 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 NEUROD6Q96NK8 337 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 MRIQ9BWK5 157 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 IL1RAPL2Q9NP60 686 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 POLLQ9UGP5 575 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 ZC3H4Q9UPT8 1303 aaKnown RBP7.57□□□□□ -1.2
PTPRR-207ENST00000548220 SBF1O95248 1867 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 MYH7P12883 1935 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 CCDC88AQ3V6T2 1871 aa7.57□□□□□ -1.2
PTPRR-207ENST00000548220 COL4A1P02462 1669 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 FAM205AQ6ZU69 1335 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 C6orf229H3BNL8 230 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 TAF5LO75529 589 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 ZFYP08048 801 aaPredicted RBP7.56□□□□□ -1.2
PTPRR-207ENST00000548220 OSBPP22059 807 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 TTC22Q5TAA0 569 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 SPTY2D1Q68D10 685 aaPredicted RBP7.56□□□□□ -1.2
PTPRR-207ENST00000548220 SMYD5Q6GMV2 418 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 CERS3Q8IU89 383 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 IL27Q8NEV9 243 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
PTPRR-207ENST00000548220 MYO3BQ8WXR4 1341 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 C3orf80F5H4A9 247 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 APBB1O00213 710 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 C21orf2O43822 256 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 SMARCA5O60264 1052 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-207ENST00000548220 MAP4K4O95819 1239 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-207ENST00000548220 APLP1P51693 650 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 TTC39AQ5SRH9 613 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 STRIP1Q5VSL9 837 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 ZSCAN25Q6NSZ9 544 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 CNTROBQ8N137 903 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 SPATA5Q8NB90 893 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 HELBQ8NG08 1087 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-207ENST00000548220 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.55□□□□□ -1.2
PTPRR-207ENST00000548220 CCDC8Q9H0W5 538 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-207ENST00000548220 TAOK3Q9H2K8 898 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 CD209Q9NNX6 404 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.55□□□□□ -1.2
PTPRR-207ENST00000548220 DOCK2Q92608 1830 aa7.55□□□□□ -1.2
PTPRR-207ENST00000548220 LMNB1P20700 586 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 IARSP41252 1262 aaKnown RBP7.54□□□□□ -1.2
PTPRR-207ENST00000548220 HDLBPQ00341 1268 aaKnown RBP7.54□□□□□ -1.2
PTPRR-207ENST00000548220 CASC1Q6TDU7 716 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 C16orf71Q8IYS4 520 aaPredicted RBP7.54□□□□□ -1.2
PTPRR-207ENST00000548220 KBTBD3Q8NAB2 608 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 ZNF516Q92618 1163 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 PRR14Q9BWN1 585 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 CDHR5Q9HBB8 845 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 BCS1LQ9Y276 419 aa7.54□□□□□ -1.2
PTPRR-207ENST00000548220 RBM19Q9Y4C8 960 aaKnown RBP7.54□□□□□ -1.2
PTPRR-207ENST00000548220 MAST3O60307 1309 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms