RNA–Protein interactions for RNA: ENST00000548086.2

SCN8A-205, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 1,966 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-205ENST00000548086 TAF6LQ9Y6J9 622 aa13.2□□□□□ -0.3
SCN8A-205ENST00000548086 BTDP43251 543 aa13.19□□□□□ -0.3
SCN8A-205ENST00000548086 FKBP1AP62942 108 aaKnown RBP13.19□□□□□ -0.3
SCN8A-205ENST00000548086 SH3RF3Q8TEJ3 882 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-205ENST00000548086 GMLQ99445 158 aa13.19□□□□□ -0.3
SCN8A-205ENST00000548086 EPB41L4AQ9HCS5 686 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-205ENST00000548086 GJA3Q9Y6H8 435 aa13.19□□□□□ -0.3
SCN8A-205ENST00000548086 SLC4A4Q9Y6R1 1079 aa13.19□□□□□ -0.3
SCN8A-205ENST00000548086 APPP05067 770 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 CRKP46108 304 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 GSTO1P78417 241 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 C9orf131Q5VYM1 1079 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 SUGT1Q9Y2Z0 365 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 GAKO14976 1311 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 BAZ2AQ9UIF9 1905 aaKnown RBP13.18□□□□□ -0.3
SCN8A-205ENST00000548086 GSG1L2A8MUP6 293 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 RBM5P52756 815 aaKnown RBP eCLIP13.18□□□□□ -0.3
SCN8A-205ENST00000548086 EIF6P56537 245 aaKnown RBP13.18□□□□□ -0.3
SCN8A-205ENST00000548086 RASEFQ8IZ41 740 aa13.18□□□□□ -0.3
SCN8A-205ENST00000548086 CDK5RAP2Q96SN8 1893 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 GPR75-ASB3A0A0A6YYF3 556 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 SMIM22K7EJ46 135 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 FGAP02671 866 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 LDHCP07864 332 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 HSPA4P34932 840 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 NECTIN1Q15223 517 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 SLC4A8Q2Y0W8 1093 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 L1TD1Q5T7N2 865 aaKnown RBP13.17□□□□□ -0.3
SCN8A-205ENST00000548086 TEKT1Q969V4 418 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 DSCC1Q9BVC3 393 aa13.17□□□□□ -0.3
SCN8A-205ENST00000548086 GMPSP49915 693 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-205ENST00000548086 HAND2P61296 217 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 EVX2Q03828 476 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 COL9A3Q14050 684 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-205ENST00000548086 APOBEC3HQ6NTF7 200 aaKnown RBP13.16□□□□□ -0.3
SCN8A-205ENST00000548086 FAM43AQ8N2R8 423 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 FAM163AQ96GL9 167 aaPredicted RBP13.16□□□□□ -0.3
SCN8A-205ENST00000548086 MYO3BQ8WXR4 1341 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 EGFRP00533 1210 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 CACNB3P54284 484 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 RHBDL3P58872 404 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 TNIP1Q15025 636 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 CREB3L3Q68CJ9 461 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 IFNL3Q8IZI9 196 aa13.16□□□□□ -0.3
SCN8A-205ENST00000548086 CYP2D7A0A087X1C5 515 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
SCN8A-205ENST00000548086 SLC27A2O14975 620 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 EIF5BO60841 1220 aaKnown RBP13.15□□□□□ -0.3
SCN8A-205ENST00000548086 BAG3O95817 575 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 CYP21A2P08686 494 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 USP17L8P0C7I0 530 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 CFAP100Q494V2 611 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 HHIPL2Q6UWX4 724 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 SLF2Q8IX21 1173 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 AGBL3Q8NEM8 1001 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 TGFBRAP1Q8WUH2 860 aa13.15□□□□□ -0.3
SCN8A-205ENST00000548086 NOL10Q9BSC4 688 aaKnown RBP13.15□□□□□ -0.3
SCN8A-205ENST00000548086 DDNO94850 711 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 PPP4CP60510 307 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 RAB3GAP1Q15042 981 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 ADCK5Q3MIX3 580 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 CDC42EP5Q6NZY7 148 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 MAPKAPK5Q8IW41 473 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 STK11IPQ8N1F8 1099 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 PRMT6Q96LA8 375 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 ZDHHC15Q96MV8 337 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 CRNKL1Q9BZJ0 848 aaKnown RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 SNX14Q9Y5W7 946 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 U3KPZ7 1027 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 GRIN3BO60391 1043 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 CD2BP2O95400 341 aaKnown RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 MCCP23508 829 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 USP5P45974 858 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 TDO2P48775 406 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 MICALL2Q8IY33 904 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 TEX11Q8IYF3 940 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 OGFOD1Q8N543 542 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 NAPBQ9H115 298 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 TDRD3Q9H7E2 651 aaKnown RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 DCP1AQ9NPI6 582 aaPredicted RBP13.14□□□□□ -0.31
SCN8A-205ENST00000548086 USP40Q9NVE5 1235 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 SERPINA10Q9UK55 444 aa13.14□□□□□ -0.31
SCN8A-205ENST00000548086 TRAK2O60296 914 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 IGSF3O75054 1194 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 CPA1P15085 419 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 GNAT2P19087 354 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 NFIAQ12857 509 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 PICALMQ13492 652 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 RBM26Q5T8P6 1007 aaKnown RBP13.13□□□□□ -0.31
SCN8A-205ENST00000548086 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
SCN8A-205ENST00000548086 SAMD7Q7Z3H4 446 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 NBPF3Q9H094 633 aa13.13□□□□□ -0.31
SCN8A-205ENST00000548086 DDX4Q9NQI0 724 aaKnown RBP13.13□□□□□ -0.31
SCN8A-205ENST00000548086 SAP30BPQ9UHR5 308 aaKnown RBP13.13□□□□□ -0.31
SCN8A-205ENST00000548086 ISY1Q9ULR0 285 aaKnown RBP13.13□□□□□ -0.31
SCN8A-205ENST00000548086 NAV1Q8NEY1 1877 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms